RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 FYB1O15117 783 aa18.86■□□□□ 0.61
TSEN54-206ENST00000579449 GGNBP2Q9H3C7 697 aa18.85■□□□□ 0.61
TSEN54-206ENST00000579449 FOXO3O43524 673 aa18.84■□□□□ 0.61
TSEN54-206ENST00000579449 PSME1Q06323 249 aa18.84■□□□□ 0.61
TSEN54-206ENST00000579449 NME9Q86XW9 330 aa18.84■□□□□ 0.61
TSEN54-206ENST00000579449 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
TSEN54-206ENST00000579449 MYBBP1AQ9BQG0 1328 aaKnown RBP18.83■□□□□ 0.61
TSEN54-206ENST00000579449 CCER2I3L3R5 266 aa18.83■□□□□ 0.6
TSEN54-206ENST00000579449 MORC1Q86VD1 984 aa18.83■□□□□ 0.6
TSEN54-206ENST00000579449 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
TSEN54-206ENST00000579449 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
TSEN54-206ENST00000579449 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
TSEN54-206ENST00000579449 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
TSEN54-206ENST00000579449 XPCQ01831 940 aaPredicted RBP18.8■□□□□ 0.6
TSEN54-206ENST00000579449 KRT28Q7Z3Y7 464 aa18.8■□□□□ 0.6
TSEN54-206ENST00000579449 PIK3C2AO00443 1686 aa18.79■□□□□ 0.6
TSEN54-206ENST00000579449 PAK3O75914 559 aaPredicted RBP18.79■□□□□ 0.6
TSEN54-206ENST00000579449 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
TSEN54-206ENST00000579449 NPHP3Q7Z494 1330 aa18.78■□□□□ 0.6
TSEN54-206ENST00000579449 PPP2R1AP30153 589 aa18.78■□□□□ 0.6
TSEN54-206ENST00000579449 COG3Q96JB2 828 aa18.78■□□□□ 0.6
TSEN54-206ENST00000579449 TNNT2P45379 298 aaPredicted RBP18.77■□□□□ 0.6
TSEN54-206ENST00000579449 CCDC184Q52MB2 194 aa18.77■□□□□ 0.6
TSEN54-206ENST00000579449 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.59
TSEN54-206ENST00000579449 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
TSEN54-206ENST00000579449 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
TSEN54-206ENST00000579449 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
TSEN54-206ENST00000579449 USP31Q70CQ4 1352 aa18.76■□□□□ 0.59
TSEN54-206ENST00000579449 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
TSEN54-206ENST00000579449 ABTB2Q8N961 1025 aa18.75■□□□□ 0.59
TSEN54-206ENST00000579449 PXDNQ92626 1479 aa18.75■□□□□ 0.59
TSEN54-206ENST00000579449 ROBO1Q9Y6N7 1651 aa18.75■□□□□ 0.59
TSEN54-206ENST00000579449 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
TSEN54-206ENST00000579449 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
TSEN54-206ENST00000579449 TOM1O60784 492 aa18.74■□□□□ 0.59
TSEN54-206ENST00000579449 ADRA2BP18089 450 aa18.74■□□□□ 0.59
TSEN54-206ENST00000579449 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
TSEN54-206ENST00000579449 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
TSEN54-206ENST00000579449 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
TSEN54-206ENST00000579449 ALS2Q96Q42 1657 aa18.73■□□□□ 0.59
TSEN54-206ENST00000579449 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
TSEN54-206ENST00000579449 NLRP6P59044 892 aa18.73■□□□□ 0.59
TSEN54-206ENST00000579449 NUTM2GQ5VZR2 741 aa18.73■□□□□ 0.59
TSEN54-206ENST00000579449 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
TSEN54-206ENST00000579449 SOS2Q07890 1332 aaPredicted RBP18.71■□□□□ 0.59
TSEN54-206ENST00000579449 UBAP1LF5GYI3 381 aa18.7■□□□□ 0.58
TSEN54-206ENST00000579449 FBLN1P23142 703 aa18.7■□□□□ 0.58
TSEN54-206ENST00000579449 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
TSEN54-206ENST00000579449 TNS3Q68CZ2 1445 aa18.69■□□□□ 0.58
TSEN54-206ENST00000579449 SPATA31A3Q5VYP0 1347 aa18.69■□□□□ 0.58
TSEN54-206ENST00000579449 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
TSEN54-206ENST00000579449 AHDC1Q5TGY3 1603 aaPredicted RBP18.68■□□□□ 0.58
TSEN54-206ENST00000579449 MTHFSP49914 203 aa18.68■□□□□ 0.58
TSEN54-206ENST00000579449 PIP4K2BP78356 416 aa18.67■□□□□ 0.58
TSEN54-206ENST00000579449 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
TSEN54-206ENST00000579449 SOX12O15370 315 aa18.65■□□□□ 0.58
TSEN54-206ENST00000579449 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
TSEN54-206ENST00000579449 USP19O94966 1318 aa18.65■□□□□ 0.58
TSEN54-206ENST00000579449 ARHGEF10O15013 1369 aa18.65■□□□□ 0.58
TSEN54-206ENST00000579449 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.57
TSEN54-206ENST00000579449 SLIT3O75094 1523 aa18.64■□□□□ 0.57
TSEN54-206ENST00000579449 PHLPP1O60346 1717 aa18.63■□□□□ 0.57
TSEN54-206ENST00000579449 PLEKHG5O94827 1062 aa18.63■□□□□ 0.57
TSEN54-206ENST00000579449 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
TSEN54-206ENST00000579449 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
TSEN54-206ENST00000579449 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
TSEN54-206ENST00000579449 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
TSEN54-206ENST00000579449 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
TSEN54-206ENST00000579449 NFAT5O94916 1531 aa18.62■□□□□ 0.57
TSEN54-206ENST00000579449 MED1Q15648 1581 aaPredicted RBP18.62■□□□□ 0.57
TSEN54-206ENST00000579449 CRYBG1Q9Y4K1 1723 aa18.61■□□□□ 0.57
TSEN54-206ENST00000579449 PHRF1Q9P1Y6 1649 aaKnown RBP18.61■□□□□ 0.57
TSEN54-206ENST00000579449 KCNH5Q8NCM2 988 aa18.61■□□□□ 0.57
TSEN54-206ENST00000579449 LTN1O94822 1766 aa18.6■□□□□ 0.57
TSEN54-206ENST00000579449 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
TSEN54-206ENST00000579449 MAP3K19Q56UN5 1328 aa18.6■□□□□ 0.57
TSEN54-206ENST00000579449 GCP02774 474 aa18.6■□□□□ 0.57
TSEN54-206ENST00000579449 COL3A1P02461 1466 aaPredicted RBP18.59■□□□□ 0.57
TSEN54-206ENST00000579449 CDK12Q9NYV4 1490 aaPredicted RBP18.59■□□□□ 0.57
TSEN54-206ENST00000579449 INSRP06213 1382 aa18.59■□□□□ 0.57
TSEN54-206ENST00000579449 PNPLA6Q8IY17 1366 aa18.59■□□□□ 0.57
TSEN54-206ENST00000579449 LRRC59Q96AG4 307 aaKnown RBP18.59■□□□□ 0.57
TSEN54-206ENST00000579449 SHPRHQ149N8 1683 aa18.59■□□□□ 0.57
TSEN54-206ENST00000579449 COL16A1Q07092 1604 aaPredicted RBP18.59■□□□□ 0.57
TSEN54-206ENST00000579449 CABLES1Q8TDN4 633 aa18.58■□□□□ 0.56
TSEN54-206ENST00000579449 AMPHP49418 695 aa18.56■□□□□ 0.56
TSEN54-206ENST00000579449 WDR43Q15061 677 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSEN54-206ENST00000579449 ABCA3Q99758 1704 aa18.56■□□□□ 0.56
TSEN54-206ENST00000579449 FLT4P35916 1363 aa18.55■□□□□ 0.56
TSEN54-206ENST00000579449 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
TSEN54-206ENST00000579449 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
TSEN54-206ENST00000579449 ARHGEF25Q86VW2 580 aa18.54■□□□□ 0.56
TSEN54-206ENST00000579449 YTHDC1Q96MU7 727 aaKnown RBP18.54■□□□□ 0.56
TSEN54-206ENST00000579449 KIF24Q5T7B8 1368 aa18.54■□□□□ 0.56
TSEN54-206ENST00000579449 HOXC9P31274 260 aa18.53■□□□□ 0.56
TSEN54-206ENST00000579449 ZC3H6P61129 1189 aaKnown RBP18.53■□□□□ 0.56
TSEN54-206ENST00000579449 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
TSEN54-206ENST00000579449 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
TSEN54-206ENST00000579449 RTL1A6NKG5 1358 aa18.53■□□□□ 0.56
TSEN54-206ENST00000579449 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms