RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 COL14A1Q05707 1796 aaKnown RBP28.14■■■□□ 2.09
CDKN2A-213ENST00000579122 NGDNQ8NEJ9 315 aaKnown RBP28.12■■■□□ 2.09
CDKN2A-213ENST00000579122 FAM98CQ17RN3 349 aaKnown RBP28.1■■■□□ 2.09
CDKN2A-213ENST00000579122 A0A0G2JS52 829 aa28.09■■■□□ 2.09
CDKN2A-213ENST00000579122 MYT1Q01538 1121 aa28.09■■■□□ 2.09
CDKN2A-213ENST00000579122 ARHGEF28Q8N1W1 1705 aaKnown RBP28.08■■■□□ 2.09
CDKN2A-213ENST00000579122 CRYBG1Q9Y4K1 1723 aa28.08■■■□□ 2.09
CDKN2A-213ENST00000579122 PAK3O75914 559 aaPredicted RBP28.07■■■□□ 2.08
CDKN2A-213ENST00000579122 ATP7BP35670 1465 aa28.07■■■□□ 2.08
CDKN2A-213ENST00000579122 ITSN1Q15811 1721 aa28.06■■■□□ 2.08
CDKN2A-213ENST00000579122 SPATA31A5Q5VU36 1347 aa28.05■■■□□ 2.08
CDKN2A-213ENST00000579122 SPATA31A7Q8IWB4 1347 aa28.05■■■□□ 2.08
CDKN2A-213ENST00000579122 NUDT16Q96DE0 195 aaKnown RBP28.05■■■□□ 2.08
CDKN2A-213ENST00000579122 PRDM11Q9NQV5 511 aa28.03■■■□□ 2.08
CDKN2A-213ENST00000579122 BAG6P46379 1132 aa28.02■■■□□ 2.08
CDKN2A-213ENST00000579122 CDK19Q9BWU1 502 aa27.99■■■□□ 2.07
CDKN2A-213ENST00000579122 THSD7AQ9UPZ6 1657 aa27.98■■■□□ 2.07
CDKN2A-213ENST00000579122 KIAA0232Q92628 1395 aa27.98■■■□□ 2.07
CDKN2A-213ENST00000579122 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
CDKN2A-213ENST00000579122 PHRF1Q9P1Y6 1649 aaKnown RBP27.96■■■□□ 2.07
CDKN2A-213ENST00000579122 KIAA1210Q9ULL0 1709 aa27.95■■■□□ 2.07
CDKN2A-213ENST00000579122 RGPD1P0DJD0 1748 aa27.95■■■□□ 2.06
CDKN2A-213ENST00000579122 SPATA31A1Q5TZJ5 1347 aa27.94■■■□□ 2.06
CDKN2A-213ENST00000579122 TOPAZ1Q8N9V7 1692 aa27.94■■■□□ 2.06
CDKN2A-213ENST00000579122 CCDC61Q9Y6R9 512 aa27.94■■■□□ 2.06
CDKN2A-213ENST00000579122 ACEP12821 1306 aa27.93■■■□□ 2.06
CDKN2A-213ENST00000579122 LRP5O75197 1615 aa27.93■■■□□ 2.06
CDKN2A-213ENST00000579122 NBPF8Q3BBV2 869 aa27.93■■■□□ 2.06
CDKN2A-213ENST00000579122 PLEKHG3A1L390 1219 aa27.92■■■□□ 2.06
CDKN2A-213ENST00000579122 CHRNA2Q15822 529 aa27.92■■■□□ 2.06
CDKN2A-213ENST00000579122 FAM182BQ5T319 152 aa27.92■■■□□ 2.06
CDKN2A-213ENST00000579122 ZC3H6P61129 1189 aaKnown RBP27.9■■■□□ 2.06
CDKN2A-213ENST00000579122 EN1Q05925 392 aaPredicted RBP27.9■■■□□ 2.06
CDKN2A-213ENST00000579122 DISP2A7MBM2 1401 aa27.9■■■□□ 2.06
CDKN2A-213ENST00000579122 NUTM2GQ5VZR2 741 aa27.89■■■□□ 2.06
CDKN2A-213ENST00000579122 STRN4Q9NRL3 753 aa27.89■■■□□ 2.06
CDKN2A-213ENST00000579122 PSDA5PKW4 1024 aaPredicted RBP27.88■■■□□ 2.05
CDKN2A-213ENST00000579122 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
CDKN2A-213ENST00000579122 TNS1Q9HBL0 1735 aaKnown RBP27.85■■■□□ 2.05
CDKN2A-213ENST00000579122 ABTB2Q8N961 1025 aa27.85■■■□□ 2.05
CDKN2A-213ENST00000579122 NRKQ7Z2Y5 1582 aa27.85■■■□□ 2.05
CDKN2A-213ENST00000579122 FAM196AQ6ZSG2 479 aa27.84■■■□□ 2.05
CDKN2A-213ENST00000579122 CPDO75976 1380 aa27.84■■■□□ 2.05
CDKN2A-213ENST00000579122 SSH2Q76I76 1423 aa27.84■■■□□ 2.05
CDKN2A-213ENST00000579122 EVA1CP58658 441 aa27.83■■■□□ 2.05
CDKN2A-213ENST00000579122 BARGINQ6ZT62 677 aa27.83■■■□□ 2.05
CDKN2A-213ENST00000579122 USP19O94966 1318 aa27.83■■■□□ 2.05
CDKN2A-213ENST00000579122 CENPJQ9HC77 1338 aaPredicted RBP27.81■■■□□ 2.04
CDKN2A-213ENST00000579122 PPIP5K1Q6PFW1 1433 aa27.81■■■□□ 2.04
CDKN2A-213ENST00000579122 CAMTA1Q9Y6Y1 1673 aa27.81■■■□□ 2.04
CDKN2A-213ENST00000579122 SRPK2P78362 688 aaKnown RBP27.8■■■□□ 2.04
CDKN2A-213ENST00000579122 USP35Q9P2H5 1018 aa27.8■■■□□ 2.04
CDKN2A-213ENST00000579122 LMO7Q8WWI1 1683 aa27.79■■■□□ 2.04
CDKN2A-213ENST00000579122 BRD4O60885 1362 aaPredicted RBP27.79■■■□□ 2.04
CDKN2A-213ENST00000579122 EZH2Q15910 746 aaKnown RBP27.79■■■□□ 2.04
CDKN2A-213ENST00000579122 NLRP13Q86W25 1043 aa27.79■■■□□ 2.04
CDKN2A-213ENST00000579122 TRIM37O94972 964 aa27.78■■■□□ 2.04
CDKN2A-213ENST00000579122 R3HDM1Q15032 1099 aaKnown RBP27.77■■■□□ 2.04
CDKN2A-213ENST00000579122 LARP1Q6PKG0 1096 aaKnown RBP27.77■■■□□ 2.04
CDKN2A-213ENST00000579122 CAMKK2Q96RR4 588 aa27.77■■■□□ 2.04
CDKN2A-213ENST00000579122 GCP02774 474 aa27.76■■■□□ 2.03
CDKN2A-213ENST00000579122 PDE3BQ13370 1112 aa27.76■■■□□ 2.03
CDKN2A-213ENST00000579122 TCP11L2Q8N4U5 519 aa27.76■■■□□ 2.03
CDKN2A-213ENST00000579122 CABP2Q9NPB3 220 aa27.76■■■□□ 2.03
CDKN2A-213ENST00000579122 PARD3Q8TEW0 1356 aa27.75■■■□□ 2.03
CDKN2A-213ENST00000579122 THRAP3Q9Y2W1 955 aaKnown RBP27.74■■■□□ 2.03
CDKN2A-213ENST00000579122 APBA3O96018 575 aa27.73■■■□□ 2.03
CDKN2A-213ENST00000579122 QRICH2Q9H0J4 1663 aa27.72■■■□□ 2.03
CDKN2A-213ENST00000579122 COL5A2P05997 1499 aaPredicted RBP27.7■■■□□ 2.03
CDKN2A-213ENST00000579122 USP6P35125 1406 aa27.69■■■□□ 2.02
CDKN2A-213ENST00000579122 CABP1Q9NZU7 370 aa27.69■■■□□ 2.02
CDKN2A-213ENST00000579122 NLRP6P59044 892 aa27.66■■■□□ 2.02
CDKN2A-213ENST00000579122 L3MBTL2Q969R5 705 aa27.66■■■□□ 2.02
CDKN2A-213ENST00000579122 PARP4Q9UKK3 1724 aaKnown RBP27.66■■■□□ 2.02
CDKN2A-213ENST00000579122 SLIT3O75094 1523 aa27.66■■■□□ 2.02
CDKN2A-213ENST00000579122 CRB1P82279 1406 aa27.66■■■□□ 2.02
CDKN2A-213ENST00000579122 RREB1Q92766 1687 aa27.65■■■□□ 2.02
CDKN2A-213ENST00000579122 AATKQ6ZMQ8 1374 aa27.65■■■□□ 2.02
CDKN2A-213ENST00000579122 C11orf95C9JLR9 678 aaPredicted RBP27.64■■■□□ 2.02
CDKN2A-213ENST00000579122 EVC2Q86UK5 1308 aa27.63■■■□□ 2.01
CDKN2A-213ENST00000579122 ZBTB7CA1YPR0 619 aa27.61■■■□□ 2.01
CDKN2A-213ENST00000579122 NBPF14Q5TI25 921 aa27.6■■■□□ 2.01
CDKN2A-213ENST00000579122 NUP188Q5SRE5 1749 aa27.6■■■□□ 2.01
CDKN2A-213ENST00000579122 TRPM1Q7Z4N2 1603 aa27.59■■■□□ 2.01
CDKN2A-213ENST00000579122 PIK3C2AO00443 1686 aa27.59■■■□□ 2.01
CDKN2A-213ENST00000579122 OVOS2A0A0G2JMS6 1433 aa27.58■■■□□ 2
CDKN2A-213ENST00000579122 OVOS2A0A0J9YW53 1432 aa27.58■■■□□ 2
CDKN2A-213ENST00000579122 OVOS2Q6IE36 1432 aa27.58■■■□□ 2
CDKN2A-213ENST00000579122 ZNF692Q9BU19 519 aaPredicted RBP27.57■■■□□ 2
CDKN2A-213ENST00000579122 PEAK1Q9H792 1746 aa27.55■■■□□ 2
CDKN2A-213ENST00000579122 COL18A1P39060 1754 aa27.55■■■□□ 2
CDKN2A-213ENST00000579122 TOM1L2Q6ZVM7 507 aa27.55■■■□□ 2
CDKN2A-213ENST00000579122 LRRC37A3O60309 1634 aa27.54■■■□□ 2
CDKN2A-213ENST00000579122 ROCK2O75116 1388 aaKnown RBP27.54■■■□□ 2
CDKN2A-213ENST00000579122 DDB1Q16531 1140 aa27.54■■■□□ 2
CDKN2A-213ENST00000579122 CPSF1Q10570 1443 aaKnown RBP27.53■■■□□ 2
CDKN2A-213ENST00000579122 TTC21BQ7Z4L5 1316 aa27.53■■■□□ 2
CDKN2A-213ENST00000579122 WDR17Q8IZU2 1322 aa27.53■■■□□ 2
CDKN2A-213ENST00000579122 KCNH5Q8NCM2 988 aa27.53■■■□□ 2
CDKN2A-213ENST00000579122 SIN3AQ96ST3 1273 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms