RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.28
CDK5RAP3-211ENST00000578996 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-211ENST00000578996 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
CDK5RAP3-211ENST00000578996 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
CDK5RAP3-211ENST00000578996 ACEP12821 1306 aa13.26□□□□□ -0.29
CDK5RAP3-211ENST00000578996 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
CDK5RAP3-211ENST00000578996 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-211ENST00000578996 PRDM11Q9NQV5 511 aa13.26□□□□□ -0.29
CDK5RAP3-211ENST00000578996 FAM98CQ17RN3 349 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-211ENST00000578996 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
CDK5RAP3-211ENST00000578996 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-211ENST00000578996 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
CDK5RAP3-211ENST00000578996 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
CDK5RAP3-211ENST00000578996 EP400Q96L91 3159 aa13.24□□□□□ -0.29
CDK5RAP3-211ENST00000578996 NRAPQ86VF7 1730 aa13.24□□□□□ -0.29
CDK5RAP3-211ENST00000578996 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
CDK5RAP3-211ENST00000578996 PPIP5K1Q6PFW1 1433 aa13.23□□□□□ -0.29
CDK5RAP3-211ENST00000578996 ZC3H6P61129 1189 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-211ENST00000578996 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-211ENST00000578996 CHRNA2Q15822 529 aa13.23□□□□□ -0.29
CDK5RAP3-211ENST00000578996 NBPF8Q3BBV2 869 aa13.23□□□□□ -0.29
CDK5RAP3-211ENST00000578996 KRT27Q7Z3Y8 459 aa13.23□□□□□ -0.29
CDK5RAP3-211ENST00000578996 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
CDK5RAP3-211ENST00000578996 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 POLR3AO14802 1390 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 KIAA0232Q92628 1395 aa13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 QRICH2Q9H0J4 1663 aa13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-211ENST00000578996 ROCK2O75116 1388 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-211ENST00000578996 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-211ENST00000578996 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
CDK5RAP3-211ENST00000578996 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-211ENST00000578996 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
CDK5RAP3-211ENST00000578996 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
CDK5RAP3-211ENST00000578996 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
CDK5RAP3-211ENST00000578996 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
CDK5RAP3-211ENST00000578996 ZBTB7CA1YPR0 619 aa13.18□□□□□ -0.3
CDK5RAP3-211ENST00000578996 EVA1CP58658 441 aa13.18□□□□□ -0.3
CDK5RAP3-211ENST00000578996 FAM182BQ5T319 152 aa13.18□□□□□ -0.3
CDK5RAP3-211ENST00000578996 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
CDK5RAP3-211ENST00000578996 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
CDK5RAP3-211ENST00000578996 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
CDK5RAP3-211ENST00000578996 NRKQ7Z2Y5 1582 aa13.17□□□□□ -0.3
CDK5RAP3-211ENST00000578996 NLRP13Q86W25 1043 aa13.17□□□□□ -0.3
CDK5RAP3-211ENST00000578996 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
CDK5RAP3-211ENST00000578996 USP6P35125 1406 aa13.14□□□□□ -0.31
CDK5RAP3-211ENST00000578996 GCP02774 474 aa13.14□□□□□ -0.31
CDK5RAP3-211ENST00000578996 BAG6P46379 1132 aa13.14□□□□□ -0.31
CDK5RAP3-211ENST00000578996 NLRP6P59044 892 aa13.14□□□□□ -0.31
CDK5RAP3-211ENST00000578996 USP19O94966 1318 aa13.13□□□□□ -0.31
CDK5RAP3-211ENST00000578996 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
CDK5RAP3-211ENST00000578996 THSD7AQ9UPZ6 1657 aa13.13□□□□□ -0.31
CDK5RAP3-211ENST00000578996 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-211ENST00000578996 CPDO75976 1380 aa13.12□□□□□ -0.31
CDK5RAP3-211ENST00000578996 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
CDK5RAP3-211ENST00000578996 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-211ENST00000578996 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
CDK5RAP3-211ENST00000578996 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
CDK5RAP3-211ENST00000578996 SOX12O15370 315 aa13.11□□□□□ -0.31
CDK5RAP3-211ENST00000578996 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-211ENST00000578996 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
CDK5RAP3-211ENST00000578996 LMO7Q8WWI1 1683 aa13.09□□□□□ -0.31
CDK5RAP3-211ENST00000578996 RGPD1P0DJD0 1748 aa13.09□□□□□ -0.31
CDK5RAP3-211ENST00000578996 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
CDK5RAP3-211ENST00000578996 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-211ENST00000578996 PIK3C2AO00443 1686 aa13.08□□□□□ -0.31
CDK5RAP3-211ENST00000578996 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
CDK5RAP3-211ENST00000578996 TRIM37O94972 964 aa13.08□□□□□ -0.32
CDK5RAP3-211ENST00000578996 BARGINQ6ZT62 677 aa13.08□□□□□ -0.32
CDK5RAP3-211ENST00000578996 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-211ENST00000578996 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
CDK5RAP3-211ENST00000578996 SLIT3O75094 1523 aa13.08□□□□□ -0.32
CDK5RAP3-211ENST00000578996 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-211ENST00000578996 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-211ENST00000578996 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
CDK5RAP3-211ENST00000578996 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
CDK5RAP3-211ENST00000578996 CRB1P82279 1406 aa13.06□□□□□ -0.32
CDK5RAP3-211ENST00000578996 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
CDK5RAP3-211ENST00000578996 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-211ENST00000578996 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
CDK5RAP3-211ENST00000578996 APBA3O96018 575 aa13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 TNS1Q9HBL0 1735 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-211ENST00000578996 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
CDK5RAP3-211ENST00000578996 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
CDK5RAP3-211ENST00000578996 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
CDK5RAP3-211ENST00000578996 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
CDK5RAP3-211ENST00000578996 R3HDM1Q15032 1099 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-211ENST00000578996 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-211ENST00000578996 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
CDK5RAP3-211ENST00000578996 DISP2A7MBM2 1401 aa13.02□□□□□ -0.33
CDK5RAP3-211ENST00000578996 DDB1Q16531 1140 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms