RNA–Protein interactions for RNA: ENST00000578826.1

MSL1-205, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-205ENST00000578826 RBM6P78332 1123 aaKnown RBP22.17■■□□□ 1.14
MSL1-205ENST00000578826 TRPC5Q9UL62 973 aaPredicted RBP22.17■■□□□ 1.14
MSL1-205ENST00000578826 ATRNO75882 1429 aa22.16■■□□□ 1.14
MSL1-205ENST00000578826 HAP1P54257 671 aaPredicted RBP22.16■■□□□ 1.14
MSL1-205ENST00000578826 TIMELESSQ9UNS1 1208 aa22.16■■□□□ 1.14
MSL1-205ENST00000578826 ABCA3Q99758 1704 aa22.15■■□□□ 1.14
MSL1-205ENST00000578826 PAK3O75914 559 aaPredicted RBP22.15■■□□□ 1.14
MSL1-205ENST00000578826 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
MSL1-205ENST00000578826 CABP1Q9NZU7 370 aa22.13■■□□□ 1.13
MSL1-205ENST00000578826 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
MSL1-205ENST00000578826 UNC5CLQ8IV45 518 aa22.11■■□□□ 1.13
MSL1-205ENST00000578826 RGS12O14924 1447 aa22.11■■□□□ 1.13
MSL1-205ENST00000578826 PLEKHG5O94827 1062 aa22.1■■□□□ 1.13
MSL1-205ENST00000578826 CRYBG1Q9Y4K1 1723 aa22.1■■□□□ 1.13
MSL1-205ENST00000578826 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.09■■□□□ 1.13
MSL1-205ENST00000578826 USP6P35125 1406 aa22.09■■□□□ 1.13
MSL1-205ENST00000578826 FAM83GA6ND36 823 aa22.09■■□□□ 1.13
MSL1-205ENST00000578826 SSH2Q76I76 1423 aa22.07■■□□□ 1.12
MSL1-205ENST00000578826 ABTB2Q8N961 1025 aa22.06■■□□□ 1.12
MSL1-205ENST00000578826 GJD4Q96KN9 370 aaPredicted RBP22.06■■□□□ 1.12
MSL1-205ENST00000578826 PUS7Q96PZ0 661 aaKnown RBP22.05■■□□□ 1.12
MSL1-205ENST00000578826 TESK2Q96S53 571 aa22.05■■□□□ 1.12
MSL1-205ENST00000578826 NWD2Q9ULI1 1742 aa22.05■■□□□ 1.12
MSL1-205ENST00000578826 CPSF1Q10570 1443 aaKnown RBP22.05■■□□□ 1.12
MSL1-205ENST00000578826 USP19O94966 1318 aa22.05■■□□□ 1.12
MSL1-205ENST00000578826 VPS72Q15906 364 aa22.04■■□□□ 1.12
MSL1-205ENST00000578826 ZNF692Q9BU19 519 aaPredicted RBP22.04■■□□□ 1.12
MSL1-205ENST00000578826 PLCH1Q4KWH8 1693 aa22.04■■□□□ 1.12
MSL1-205ENST00000578826 ST20-MTHFSA0A0A6YYL1 179 aa22.03■■□□□ 1.12
MSL1-205ENST00000578826 NUTM2GQ5VZR2 741 aa22.03■■□□□ 1.12
MSL1-205ENST00000578826 PHRF1Q9P1Y6 1649 aaKnown RBP22.02■■□□□ 1.12
MSL1-205ENST00000578826 SLC24A1O60721 1099 aa22.02■■□□□ 1.12
MSL1-205ENST00000578826 COL14A1Q05707 1796 aaKnown RBP22.02■■□□□ 1.11
MSL1-205ENST00000578826 NLRP13Q86W25 1043 aa22.01■■□□□ 1.11
MSL1-205ENST00000578826 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
MSL1-205ENST00000578826 KIAA0232Q92628 1395 aa22■■□□□ 1.11
MSL1-205ENST00000578826 GLI3P10071 1580 aa22■■□□□ 1.11
MSL1-205ENST00000578826 PRDM11Q9NQV5 511 aa22■■□□□ 1.11
MSL1-205ENST00000578826 BTG4Q9NY30 223 aa22■■□□□ 1.11
MSL1-205ENST00000578826 USP47Q96K76 1375 aa21.99■■□□□ 1.11
MSL1-205ENST00000578826 NRKQ7Z2Y5 1582 aa21.99■■□□□ 1.11
MSL1-205ENST00000578826 CPDO75976 1380 aa21.99■■□□□ 1.11
MSL1-205ENST00000578826 NRAPQ86VF7 1730 aa21.98■■□□□ 1.11
MSL1-205ENST00000578826 TTC21BQ7Z4L5 1316 aa21.98■■□□□ 1.11
MSL1-205ENST00000578826 CD163L1Q9NR16 1453 aa21.97■■□□□ 1.11
MSL1-205ENST00000578826 GCP02774 474 aa21.97■■□□□ 1.11
MSL1-205ENST00000578826 UPF1Q92900 1129 aaKnown RBP eCLIP21.97■■□□□ 1.11
MSL1-205ENST00000578826 TTC21AQ8NDW8 1320 aa21.97■■□□□ 1.11
MSL1-205ENST00000578826 AKAP12Q02952 1782 aa21.97■■□□□ 1.11
MSL1-205ENST00000578826 NLRP6P59044 892 aa21.96■■□□□ 1.11
MSL1-205ENST00000578826 ZC3H6P61129 1189 aaKnown RBP21.96■■□□□ 1.11
MSL1-205ENST00000578826 KTN1Q86UP2 1357 aaKnown RBP21.96■■□□□ 1.11
MSL1-205ENST00000578826 SLIT3O75094 1523 aa21.96■■□□□ 1.11
MSL1-205ENST00000578826 ONECUT3O60422 494 aaPredicted RBP21.95■■□□□ 1.1
MSL1-205ENST00000578826 PIK3C2AO00443 1686 aa21.95■■□□□ 1.1
MSL1-205ENST00000578826 SLC12A5Q9H2X9 1139 aa21.94■■□□□ 1.1
MSL1-205ENST00000578826 NINLQ9Y2I6 1382 aa21.94■■□□□ 1.1
MSL1-205ENST00000578826 CHRNA2Q15822 529 aa21.93■■□□□ 1.1
MSL1-205ENST00000578826 TMC1Q8TDI8 760 aa21.93■■□□□ 1.1
MSL1-205ENST00000578826 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
MSL1-205ENST00000578826 MON2Q7Z3U7 1717 aa21.92■■□□□ 1.1
MSL1-205ENST00000578826 SPATA31A5Q5VU36 1347 aa21.91■■□□□ 1.1
MSL1-205ENST00000578826 SPATA31A7Q8IWB4 1347 aa21.91■■□□□ 1.1
MSL1-205ENST00000578826 HDGFL2Q7Z4V5 671 aaPredicted RBP21.91■■□□□ 1.1
MSL1-205ENST00000578826 TMF1P82094 1093 aa21.9■■□□□ 1.1
MSL1-205ENST00000578826 TERF2IPQ9NYB0 399 aa21.9■■□□□ 1.1
MSL1-205ENST00000578826 A0A1W2PP64 1363 aa21.89■■□□□ 1.1
MSL1-205ENST00000578826 LMO7Q8WWI1 1683 aa21.89■■□□□ 1.1
MSL1-205ENST00000578826 SEPT12Q8IYM1 358 aa21.89■■□□□ 1.09
MSL1-205ENST00000578826 EDC4Q6P2E9 1401 aaKnown RBP21.89■■□□□ 1.09
MSL1-205ENST00000578826 USP31Q70CQ4 1352 aa21.88■■□□□ 1.09
MSL1-205ENST00000578826 CAMTA1Q9Y6Y1 1673 aa21.88■■□□□ 1.09
MSL1-205ENST00000578826 KCNH5Q8NCM2 988 aa21.87■■□□□ 1.09
MSL1-205ENST00000578826 AATKQ6ZMQ8 1374 aa21.87■■□□□ 1.09
MSL1-205ENST00000578826 SPATA31A1Q5TZJ5 1347 aa21.85■■□□□ 1.09
MSL1-205ENST00000578826 FAM98CQ17RN3 349 aaKnown RBP21.85■■□□□ 1.09
MSL1-205ENST00000578826 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.85■■□□□ 1.09
MSL1-205ENST00000578826 STRN4Q9NRL3 753 aa21.85■■□□□ 1.09
MSL1-205ENST00000578826 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
MSL1-205ENST00000578826 COL5A2P05997 1499 aaPredicted RBP21.83■■□□□ 1.09
MSL1-205ENST00000578826 USP54Q70EL1 1684 aa21.83■■□□□ 1.09
MSL1-205ENST00000578826 ARHGEF25Q86VW2 580 aa21.83■■□□□ 1.09
MSL1-205ENST00000578826 NME9Q86XW9 330 aa21.83■■□□□ 1.09
MSL1-205ENST00000578826 NFAT5O94916 1531 aa21.83■■□□□ 1.09
MSL1-205ENST00000578826 ANKRD36BQ8N2N9 1353 aa21.83■■□□□ 1.08
MSL1-205ENST00000578826 EVA1CP58658 441 aa21.82■■□□□ 1.08
MSL1-205ENST00000578826 LARP1Q6PKG0 1096 aaKnown RBP21.81■■□□□ 1.08
MSL1-205ENST00000578826 KRT27Q7Z3Y8 459 aa21.81■■□□□ 1.08
MSL1-205ENST00000578826 ZRANB1Q9UGI0 708 aa21.81■■□□□ 1.08
MSL1-205ENST00000578826 THSD7AQ9UPZ6 1657 aa21.8■■□□□ 1.08
MSL1-205ENST00000578826 BARGINQ6ZT62 677 aa21.79■■□□□ 1.08
MSL1-205ENST00000578826 EP400Q96L91 3159 aa21.79■■□□□ 1.08
MSL1-205ENST00000578826 OVOS2A0A0J9YW53 1432 aa21.79■■□□□ 1.08
MSL1-205ENST00000578826 OVOS2Q6IE36 1432 aa21.79■■□□□ 1.08
MSL1-205ENST00000578826 COL18A1P39060 1754 aa21.79■■□□□ 1.08
MSL1-205ENST00000578826 CCDC125Q86Z20 511 aa21.78■■□□□ 1.08
MSL1-205ENST00000578826 BRWD3Q6RI45 1802 aa21.78■■□□□ 1.08
MSL1-205ENST00000578826 ABCC6O95255 1503 aa21.77■■□□□ 1.08
MSL1-205ENST00000578826 A0A0G2JS52 829 aa21.77■■□□□ 1.08
MSL1-205ENST00000578826 ZBTB7CA1YPR0 619 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms