RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SRPK2P78362 688 aaKnown RBP22.81■■□□□ 1.24
CRLF3-203ENST00000578692 CCDC9Q9Y3X0 531 aaKnown RBP22.81■■□□□ 1.24
CRLF3-203ENST00000578692 NWD2Q9ULI1 1742 aa22.81■■□□□ 1.24
CRLF3-203ENST00000578692 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
CRLF3-203ENST00000578692 GLI3P10071 1580 aa22.8■■□□□ 1.24
CRLF3-203ENST00000578692 POLR3AO14802 1390 aaPredicted RBP22.8■■□□□ 1.24
CRLF3-203ENST00000578692 BTG4Q9NY30 223 aa22.78■■□□□ 1.24
CRLF3-203ENST00000578692 CABP2Q9NPB3 220 aa22.77■■□□□ 1.24
CRLF3-203ENST00000578692 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
CRLF3-203ENST00000578692 TRPM1Q7Z4N2 1603 aa22.76■■□□□ 1.23
CRLF3-203ENST00000578692 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
CRLF3-203ENST00000578692 SEPT12Q8IYM1 358 aa22.76■■□□□ 1.23
CRLF3-203ENST00000578692 NUTM2GQ5VZR2 741 aa22.75■■□□□ 1.23
CRLF3-203ENST00000578692 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
CRLF3-203ENST00000578692 COL14A1Q05707 1796 aaKnown RBP22.74■■□□□ 1.23
CRLF3-203ENST00000578692 CCDC125Q86Z20 511 aa22.74■■□□□ 1.23
CRLF3-203ENST00000578692 PRDM11Q9NQV5 511 aa22.74■■□□□ 1.23
CRLF3-203ENST00000578692 ROCK2O75116 1388 aaKnown RBP22.73■■□□□ 1.23
CRLF3-203ENST00000578692 CRYBG1Q9Y4K1 1723 aa22.73■■□□□ 1.23
CRLF3-203ENST00000578692 PPIP5K1Q6PFW1 1433 aa22.73■■□□□ 1.23
CRLF3-203ENST00000578692 ABTB2Q8N961 1025 aa22.73■■□□□ 1.23
CRLF3-203ENST00000578692 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
CRLF3-203ENST00000578692 EVC2Q86UK5 1308 aa22.71■■□□□ 1.23
CRLF3-203ENST00000578692 NRAPQ86VF7 1730 aa22.71■■□□□ 1.23
CRLF3-203ENST00000578692 ZC3H6P61129 1189 aaKnown RBP22.7■■□□□ 1.22
CRLF3-203ENST00000578692 BRWD3Q6RI45 1802 aa22.7■■□□□ 1.22
CRLF3-203ENST00000578692 KIAA0232Q92628 1395 aa22.69■■□□□ 1.22
CRLF3-203ENST00000578692 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
CRLF3-203ENST00000578692 CHRNA2Q15822 529 aa22.68■■□□□ 1.22
CRLF3-203ENST00000578692 FAM98CQ17RN3 349 aaKnown RBP22.68■■□□□ 1.22
CRLF3-203ENST00000578692 A0A0G2JS52 829 aa22.67■■□□□ 1.22
CRLF3-203ENST00000578692 MYT1Q01538 1121 aa22.67■■□□□ 1.22
CRLF3-203ENST00000578692 KRT27Q7Z3Y8 459 aa22.67■■□□□ 1.22
CRLF3-203ENST00000578692 NLRP13Q86W25 1043 aa22.67■■□□□ 1.22
CRLF3-203ENST00000578692 SPATA31A5Q5VU36 1347 aa22.66■■□□□ 1.22
CRLF3-203ENST00000578692 SPATA31A7Q8IWB4 1347 aa22.66■■□□□ 1.22
CRLF3-203ENST00000578692 PHRF1Q9P1Y6 1649 aaKnown RBP22.66■■□□□ 1.22
CRLF3-203ENST00000578692 BRD4O60885 1362 aaPredicted RBP22.66■■□□□ 1.22
CRLF3-203ENST00000578692 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
CRLF3-203ENST00000578692 EP400Q96L91 3159 aa22.63■■□□□ 1.21
CRLF3-203ENST00000578692 GCP02774 474 aa22.63■■□□□ 1.21
CRLF3-203ENST00000578692 STRN4Q9NRL3 753 aa22.63■■□□□ 1.21
CRLF3-203ENST00000578692 BLMP54132 1417 aaPredicted RBP22.63■■□□□ 1.21
CRLF3-203ENST00000578692 USP19O94966 1318 aa22.62■■□□□ 1.21
CRLF3-203ENST00000578692 EVA1CP58658 441 aa22.62■■□□□ 1.21
CRLF3-203ENST00000578692 CARD11Q9BXL7 1154 aa22.62■■□□□ 1.21
CRLF3-203ENST00000578692 USP6P35125 1406 aa22.61■■□□□ 1.21
CRLF3-203ENST00000578692 SF3B2Q13435 895 aaKnown RBP22.61■■□□□ 1.21
CRLF3-203ENST00000578692 ZNF692Q9BU19 519 aaPredicted RBP22.61■■□□□ 1.21
CRLF3-203ENST00000578692 NLRP6P59044 892 aa22.6■■□□□ 1.21
CRLF3-203ENST00000578692 SPATA31A1Q5TZJ5 1347 aa22.59■■□□□ 1.21
CRLF3-203ENST00000578692 CPDO75976 1380 aa22.59■■□□□ 1.21
CRLF3-203ENST00000578692 NRKQ7Z2Y5 1582 aa22.58■■□□□ 1.21
CRLF3-203ENST00000578692 ZRANB1Q9UGI0 708 aa22.58■■□□□ 1.21
CRLF3-203ENST00000578692 SSH2Q76I76 1423 aa22.56■■□□□ 1.2
CRLF3-203ENST00000578692 CAMTA1Q9Y6Y1 1673 aa22.55■■□□□ 1.2
CRLF3-203ENST00000578692 DEFB132Q7Z7B7 95 aa22.55■■□□□ 1.2
CRLF3-203ENST00000578692 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
CRLF3-203ENST00000578692 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
CRLF3-203ENST00000578692 FAM182BQ5T319 152 aa22.53■■□□□ 1.2
CRLF3-203ENST00000578692 LARP1Q6PKG0 1096 aaKnown RBP22.53■■□□□ 1.2
CRLF3-203ENST00000578692 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
CRLF3-203ENST00000578692 THSD7AQ9UPZ6 1657 aa22.52■■□□□ 1.2
CRLF3-203ENST00000578692 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
CRLF3-203ENST00000578692 ZBTB7CA1YPR0 619 aa22.51■■□□□ 1.19
CRLF3-203ENST00000578692 BARGINQ6ZT62 677 aa22.51■■□□□ 1.19
CRLF3-203ENST00000578692 CPSF1Q10570 1443 aaKnown RBP22.5■■□□□ 1.19
CRLF3-203ENST00000578692 AKAP12Q02952 1782 aa22.5■■□□□ 1.19
CRLF3-203ENST00000578692 TTC21AQ8NDW8 1320 aa22.49■■□□□ 1.19
CRLF3-203ENST00000578692 KTN1Q86UP2 1357 aaKnown RBP22.49■■□□□ 1.19
CRLF3-203ENST00000578692 SLIT3O75094 1523 aa22.49■■□□□ 1.19
CRLF3-203ENST00000578692 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
CRLF3-203ENST00000578692 BAG6P46379 1132 aa22.49■■□□□ 1.19
CRLF3-203ENST00000578692 TCP11L2Q8N4U5 519 aa22.49■■□□□ 1.19
CRLF3-203ENST00000578692 THRAP3Q9Y2W1 955 aaKnown RBP22.48■■□□□ 1.19
CRLF3-203ENST00000578692 AATKQ6ZMQ8 1374 aa22.48■■□□□ 1.19
CRLF3-203ENST00000578692 KCNH5Q8NCM2 988 aa22.47■■□□□ 1.19
CRLF3-203ENST00000578692 TMC1Q8TDI8 760 aa22.47■■□□□ 1.19
CRLF3-203ENST00000578692 COL5A2P05997 1499 aaPredicted RBP22.46■■□□□ 1.19
CRLF3-203ENST00000578692 PDE3BQ13370 1112 aa22.46■■□□□ 1.19
CRLF3-203ENST00000578692 FAM196AQ6ZSG2 479 aa22.46■■□□□ 1.19
CRLF3-203ENST00000578692 ARHGEF25Q86VW2 580 aa22.44■■□□□ 1.18
CRLF3-203ENST00000578692 PUS7Q96PZ0 661 aaKnown RBP22.44■■□□□ 1.18
CRLF3-203ENST00000578692 SLC12A5Q9H2X9 1139 aa22.44■■□□□ 1.18
CRLF3-203ENST00000578692 SOX12O15370 315 aa22.43■■□□□ 1.18
CRLF3-203ENST00000578692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.43■■□□□ 1.18
CRLF3-203ENST00000578692 AXIN2Q9Y2T1 843 aa22.43■■□□□ 1.18
CRLF3-203ENST00000578692 CRB1P82279 1406 aa22.43■■□□□ 1.18
CRLF3-203ENST00000578692 ST20-MTHFSA0A0A6YYL1 179 aa22.42■■□□□ 1.18
CRLF3-203ENST00000578692 HDGFL2Q7Z4V5 671 aaPredicted RBP22.42■■□□□ 1.18
CRLF3-203ENST00000578692 EN1Q05925 392 aaPredicted RBP22.41■■□□□ 1.18
CRLF3-203ENST00000578692 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
CRLF3-203ENST00000578692 RGPD1P0DJD0 1748 aa22.41■■□□□ 1.18
CRLF3-203ENST00000578692 COL18A1P39060 1754 aa22.41■■□□□ 1.18
CRLF3-203ENST00000578692 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
CRLF3-203ENST00000578692 CD163L1Q9NR16 1453 aa22.4■■□□□ 1.18
CRLF3-203ENST00000578692 SLC24A1O60721 1099 aa22.4■■□□□ 1.18
CRLF3-203ENST00000578692 TRIM37O94972 964 aa22.4■■□□□ 1.18
CRLF3-203ENST00000578692 TESK2Q96S53 571 aa22.4■■□□□ 1.18
CRLF3-203ENST00000578692 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms