RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 NACADO15069 1562 aa9.53□□□□□ -0.88
PTPRM-207ENST00000578571 BAP1Q92560 729 aa9.52□□□□□ -0.89
PTPRM-207ENST00000578571 FKBPLQ9UIM3 349 aa9.52□□□□□ -0.89
PTPRM-207ENST00000578571 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
PTPRM-207ENST00000578571 APBB1O00213 710 aa9.51□□□□□ -0.89
PTPRM-207ENST00000578571 LINC01559Q495D7 138 aa9.51□□□□□ -0.89
PTPRM-207ENST00000578571 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
PTPRM-207ENST00000578571 TBC1D2BQ9UPU7 963 aa9.51□□□□□ -0.89
PTPRM-207ENST00000578571 NDUFB9Q9Y6M9 179 aa9.51□□□□□ -0.89
PTPRM-207ENST00000578571 RB1CC1Q8TDY2 1594 aa9.5□□□□□ -0.89
PTPRM-207ENST00000578571 RGS20O76081 388 aa9.5□□□□□ -0.89
PTPRM-207ENST00000578571 SKOR1P84550 965 aa9.5□□□□□ -0.89
PTPRM-207ENST00000578571 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
PTPRM-207ENST00000578571 POM121Q96HA1 1249 aa9.5□□□□□ -0.89
PTPRM-207ENST00000578571 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
PTPRM-207ENST00000578571 CD2BP2O95400 341 aaKnown RBP9.49□□□□□ -0.89
PTPRM-207ENST00000578571 SH3BP2P78314 561 aa9.49□□□□□ -0.89
PTPRM-207ENST00000578571 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
PTPRM-207ENST00000578571 GDPD2Q9HCC8 539 aa9.49□□□□□ -0.89
PTPRM-207ENST00000578571 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
PTPRM-207ENST00000578571 UBTFP17480 764 aaKnown RBP9.48□□□□□ -0.89
PTPRM-207ENST00000578571 NBPF14Q5TI25 921 aa9.48□□□□□ -0.89
PTPRM-207ENST00000578571 GPKOWQ92917 476 aaPredicted RBP eCLIP9.48□□□□□ -0.89
PTPRM-207ENST00000578571 WNT7BP56706 349 aa9.47□□□□□ -0.89
PTPRM-207ENST00000578571 ZNF598Q86UK7 904 aaKnown RBP9.47□□□□□ -0.89
PTPRM-207ENST00000578571 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
PTPRM-207ENST00000578571 IRF5Q13568 498 aa9.46□□□□□ -0.9
PTPRM-207ENST00000578571 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.9
PTPRM-207ENST00000578571 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
PTPRM-207ENST00000578571 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
PTPRM-207ENST00000578571 PNMA1Q8ND90 353 aa9.46□□□□□ -0.9
PTPRM-207ENST00000578571 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
PTPRM-207ENST00000578571 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
PTPRM-207ENST00000578571 SH3RF1Q7Z6J0 888 aa9.45□□□□□ -0.9
PTPRM-207ENST00000578571 CLUAP1Q96AJ1 413 aa9.45□□□□□ -0.9
PTPRM-207ENST00000578571 ABL2P42684 1182 aa9.44□□□□□ -0.9
PTPRM-207ENST00000578571 PRM3Q9NNZ6 103 aa9.44□□□□□ -0.9
PTPRM-207ENST00000578571 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
PTPRM-207ENST00000578571 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
PTPRM-207ENST00000578571 WNT7AO00755 349 aa9.42□□□□□ -0.9
PTPRM-207ENST00000578571 RAD21O60216 631 aa9.42□□□□□ -0.9
PTPRM-207ENST00000578571 GPSM3Q9Y4H4 160 aa9.42□□□□□ -0.9
PTPRM-207ENST00000578571 FBXO45P0C2W1 286 aa9.41□□□□□ -0.9
PTPRM-207ENST00000578571 TRIM67Q6ZTA4 783 aa9.41□□□□□ -0.9
PTPRM-207ENST00000578571 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-207ENST00000578571 ARHGAP9Q9BRR9 750 aa9.41□□□□□ -0.9
PTPRM-207ENST00000578571 A6NJR5 290 aa9.4□□□□□ -0.9
PTPRM-207ENST00000578571 GDF9O60383 454 aa9.4□□□□□ -0.9
PTPRM-207ENST00000578571 PTK2Q05397 1052 aa9.4□□□□□ -0.9
PTPRM-207ENST00000578571 C1QTNF2Q9BXJ5 285 aa9.4□□□□□ -0.9
PTPRM-207ENST00000578571 ZBBXA8MT70 800 aa9.39□□□□□ -0.91
PTPRM-207ENST00000578571 FOXC1Q12948 553 aa9.39□□□□□ -0.91
PTPRM-207ENST00000578571 NR1H3Q13133 447 aa9.39□□□□□ -0.91
PTPRM-207ENST00000578571 AGERQ15109 404 aa9.39□□□□□ -0.91
PTPRM-207ENST00000578571 FNBP4Q8N3X1 1017 aaPredicted RBP9.39□□□□□ -0.91
PTPRM-207ENST00000578571 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
PTPRM-207ENST00000578571 MRGPRX2Q96LB1 330 aa9.39□□□□□ -0.91
PTPRM-207ENST00000578571 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
PTPRM-207ENST00000578571 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
PTPRM-207ENST00000578571 SIAH2O43255 324 aa9.38□□□□□ -0.91
PTPRM-207ENST00000578571 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
PTPRM-207ENST00000578571 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
PTPRM-207ENST00000578571 ADAM32Q8TC27 787 aa9.38□□□□□ -0.91
PTPRM-207ENST00000578571 ERFEQ4G0M1 354 aa9.37□□□□□ -0.91
PTPRM-207ENST00000578571 C14orf37Q86TY3 774 aa9.37□□□□□ -0.91
PTPRM-207ENST00000578571 TNFRSF10AO00220 468 aa9.36□□□□□ -0.91
PTPRM-207ENST00000578571 VAC14Q08AM6 782 aa9.36□□□□□ -0.91
PTPRM-207ENST00000578571 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
PTPRM-207ENST00000578571 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
PTPRM-207ENST00000578571 PRR20EP86478 221 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 PRR20CP86479 221 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 PRR20DP86480 221 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 PRR20BP86481 221 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 PRR20AP86496 221 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 WASHC4Q2M389 1173 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
PTPRM-207ENST00000578571 FAM174AQ8TBP5 190 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
PTPRM-207ENST00000578571 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
PTPRM-207ENST00000578571 MPNDQ8N594 471 aa9.33□□□□□ -0.92
PTPRM-207ENST00000578571 TOR4AQ9NXH8 423 aa9.33□□□□□ -0.92
PTPRM-207ENST00000578571 POM121CA8CG34 1229 aa9.32□□□□□ -0.92
PTPRM-207ENST00000578571 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
PTPRM-207ENST00000578571 CDK15Q96Q40 435 aa9.32□□□□□ -0.92
PTPRM-207ENST00000578571 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
PTPRM-207ENST00000578571 TRAK2O60296 914 aa9.31□□□□□ -0.92
PTPRM-207ENST00000578571 SNIP1Q8TAD8 396 aaKnown RBP9.31□□□□□ -0.92
PTPRM-207ENST00000578571 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-207ENST00000578571 CYP4X1Q8N118 509 aa9.3□□□□□ -0.92
PTPRM-207ENST00000578571 SLC10A4Q96EP9 437 aa9.3□□□□□ -0.92
PTPRM-207ENST00000578571 MAP4K5Q9Y4K4 846 aa9.3□□□□□ -0.92
PTPRM-207ENST00000578571 PCDHB9Q9Y5E1 797 aa9.3□□□□□ -0.92
PTPRM-207ENST00000578571 DZIP3Q86Y13 1208 aaKnown RBP9.29□□□□□ -0.92
PTPRM-207ENST00000578571 J3QL48 77 aa9.28□□□□□ -0.92
PTPRM-207ENST00000578571 ALDH1A1P00352 501 aa9.28□□□□□ -0.92
PTPRM-207ENST00000578571 GRM5P41594 1212 aa9.28□□□□□ -0.92
PTPRM-207ENST00000578571 EIF4G2P78344 907 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPRM-207ENST00000578571 ARID5BQ14865 1188 aa9.28□□□□□ -0.92
PTPRM-207ENST00000578571 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
PTPRM-207ENST00000578571 ADAMTS19Q8TE59 1207 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms