RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
UPF3AP2-202ENST00000578315 COL14A1Q05707 1796 aaKnown RBP20.09■□□□□ 0.81
UPF3AP2-202ENST00000578315 ADGRB1O14514 1584 aa20.08■□□□□ 0.81
UPF3AP2-202ENST00000578315 HRCP23327 699 aa20.08■□□□□ 0.81
UPF3AP2-202ENST00000578315 NGDNQ8NEJ9 315 aaKnown RBP20.08■□□□□ 0.81
UPF3AP2-202ENST00000578315 SPATA31A5Q5VU36 1347 aa20.06■□□□□ 0.8
UPF3AP2-202ENST00000578315 SPATA31A7Q8IWB4 1347 aa20.06■□□□□ 0.8
UPF3AP2-202ENST00000578315 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
UPF3AP2-202ENST00000578315 PRDM11Q9NQV5 511 aa20.05■□□□□ 0.8
UPF3AP2-202ENST00000578315 TULP4Q9NRJ4 1543 aa20.05■□□□□ 0.8
UPF3AP2-202ENST00000578315 R3HDM1Q15032 1099 aaKnown RBP20.04■□□□□ 0.8
UPF3AP2-202ENST00000578315 DCAF11Q8TEB1 546 aa20.04■□□□□ 0.8
UPF3AP2-202ENST00000578315 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
UPF3AP2-202ENST00000578315 RGPD1P0DJD0 1748 aa20.04■□□□□ 0.8
UPF3AP2-202ENST00000578315 CHRNA2Q15822 529 aa20.03■□□□□ 0.8
UPF3AP2-202ENST00000578315 CRYBG1Q9Y4K1 1723 aa20.02■□□□□ 0.8
UPF3AP2-202ENST00000578315 RAB3GAP2Q9H2M9 1393 aa20.02■□□□□ 0.8
UPF3AP2-202ENST00000578315 THSD7AQ9UPZ6 1657 aa20.01■□□□□ 0.79
UPF3AP2-202ENST00000578315 EZH2Q15910 746 aaKnown RBP20.01■□□□□ 0.79
UPF3AP2-202ENST00000578315 NUTM2GQ5VZR2 741 aa20.01■□□□□ 0.79
UPF3AP2-202ENST00000578315 STRN4Q9NRL3 753 aa20.01■□□□□ 0.79
UPF3AP2-202ENST00000578315 KIAA0232Q92628 1395 aa20■□□□□ 0.79
UPF3AP2-202ENST00000578315 ZC3H6P61129 1189 aaKnown RBP19.99■□□□□ 0.79
UPF3AP2-202ENST00000578315 NUDT16Q96DE0 195 aaKnown RBP19.99■□□□□ 0.79
UPF3AP2-202ENST00000578315 SPATA31A1Q5TZJ5 1347 aa19.99■□□□□ 0.79
UPF3AP2-202ENST00000578315 TNS1Q9HBL0 1735 aaKnown RBP19.99■□□□□ 0.79
UPF3AP2-202ENST00000578315 TRIM37O94972 964 aa19.98■□□□□ 0.79
UPF3AP2-202ENST00000578315 USP35Q9P2H5 1018 aa19.98■□□□□ 0.79
UPF3AP2-202ENST00000578315 ATP7BP35670 1465 aa19.96■□□□□ 0.79
UPF3AP2-202ENST00000578315 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
UPF3AP2-202ENST00000578315 PHRF1Q9P1Y6 1649 aaKnown RBP19.94■□□□□ 0.78
UPF3AP2-202ENST00000578315 ITSN1Q15811 1721 aa19.94■□□□□ 0.78
UPF3AP2-202ENST00000578315 ARHGEF28Q8N1W1 1705 aaKnown RBP19.94■□□□□ 0.78
UPF3AP2-202ENST00000578315 APBA3O96018 575 aa19.94■□□□□ 0.78
UPF3AP2-202ENST00000578315 FAM196AQ6ZSG2 479 aa19.94■□□□□ 0.78
UPF3AP2-202ENST00000578315 CAMKK2Q96RR4 588 aa19.94■□□□□ 0.78
UPF3AP2-202ENST00000578315 CDK19Q9BWU1 502 aa19.94■□□□□ 0.78
UPF3AP2-202ENST00000578315 EVA1CP58658 441 aa19.93■□□□□ 0.78
UPF3AP2-202ENST00000578315 ACEP12821 1306 aa19.91■□□□□ 0.78
UPF3AP2-202ENST00000578315 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
UPF3AP2-202ENST00000578315 NBPF8Q3BBV2 869 aa19.9■□□□□ 0.78
UPF3AP2-202ENST00000578315 LARP1Q6PKG0 1096 aaKnown RBP19.89■□□□□ 0.77
UPF3AP2-202ENST00000578315 SSH2Q76I76 1423 aa19.88■□□□□ 0.77
UPF3AP2-202ENST00000578315 ABTB2Q8N961 1025 aa19.88■□□□□ 0.77
UPF3AP2-202ENST00000578315 STAC3Q96MF2 364 aa19.88■□□□□ 0.77
UPF3AP2-202ENST00000578315 POLR3AO14802 1390 aaPredicted RBP19.87■□□□□ 0.77
UPF3AP2-202ENST00000578315 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
UPF3AP2-202ENST00000578315 BARGINQ6ZT62 677 aa19.86■□□□□ 0.77
UPF3AP2-202ENST00000578315 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
UPF3AP2-202ENST00000578315 TOPAZ1Q8N9V7 1692 aa19.86■□□□□ 0.77
UPF3AP2-202ENST00000578315 TCP11L2Q8N4U5 519 aa19.85■□□□□ 0.77
UPF3AP2-202ENST00000578315 NRKQ7Z2Y5 1582 aa19.85■□□□□ 0.77
UPF3AP2-202ENST00000578315 PARD3Q8TEW0 1356 aa19.83■□□□□ 0.77
UPF3AP2-202ENST00000578315 PLEKHG3A1L390 1219 aa19.83■□□□□ 0.77
UPF3AP2-202ENST00000578315 ZBTB7CA1YPR0 619 aa19.83■□□□□ 0.77
UPF3AP2-202ENST00000578315 RREB1Q92766 1687 aa19.83■□□□□ 0.76
UPF3AP2-202ENST00000578315 NBPF14Q5TI25 921 aa19.82■□□□□ 0.76
UPF3AP2-202ENST00000578315 NUP188Q5SRE5 1749 aa19.82■□□□□ 0.76
UPF3AP2-202ENST00000578315 LMO7Q8WWI1 1683 aa19.81■□□□□ 0.76
UPF3AP2-202ENST00000578315 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
UPF3AP2-202ENST00000578315 USP19O94966 1318 aa19.8■□□□□ 0.76
UPF3AP2-202ENST00000578315 GCP02774 474 aa19.8■□□□□ 0.76
UPF3AP2-202ENST00000578315 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
UPF3AP2-202ENST00000578315 CPDO75976 1380 aa19.8■□□□□ 0.76
UPF3AP2-202ENST00000578315 NLRP13Q86W25 1043 aa19.79■□□□□ 0.76
UPF3AP2-202ENST00000578315 PPIP5K1Q6PFW1 1433 aa19.78■□□□□ 0.76
UPF3AP2-202ENST00000578315 CABP2Q9NPB3 220 aa19.78■□□□□ 0.76
UPF3AP2-202ENST00000578315 THRAP3Q9Y2W1 955 aaKnown RBP19.77■□□□□ 0.76
UPF3AP2-202ENST00000578315 COL5A2P05997 1499 aaPredicted RBP19.77■□□□□ 0.76
UPF3AP2-202ENST00000578315 PPP1R1BQ9UD71 204 aaPredicted RBP19.76■□□□□ 0.75
UPF3AP2-202ENST00000578315 PARP4Q9UKK3 1724 aaKnown RBP19.75■□□□□ 0.75
UPF3AP2-202ENST00000578315 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
UPF3AP2-202ENST00000578315 YY1P25490 414 aa19.74■□□□□ 0.75
UPF3AP2-202ENST00000578315 SPON1Q9HCB6 807 aa19.74■□□□□ 0.75
UPF3AP2-202ENST00000578315 CRB1P82279 1406 aa19.74■□□□□ 0.75
UPF3AP2-202ENST00000578315 CENPJQ9HC77 1338 aaPredicted RBP19.74■□□□□ 0.75
UPF3AP2-202ENST00000578315 NLRP6P59044 892 aa19.73■□□□□ 0.75
UPF3AP2-202ENST00000578315 KCNQ2O43526 872 aa19.72■□□□□ 0.75
UPF3AP2-202ENST00000578315 CABP1Q9NZU7 370 aa19.72■□□□□ 0.75
UPF3AP2-202ENST00000578315 OVOS2A0A0G2JMS6 1433 aa19.71■□□□□ 0.75
UPF3AP2-202ENST00000578315 OVOS2A0A0J9YW53 1432 aa19.71■□□□□ 0.75
UPF3AP2-202ENST00000578315 OVOS2Q6IE36 1432 aa19.71■□□□□ 0.75
UPF3AP2-202ENST00000578315 TOM1L2Q6ZVM7 507 aa19.71■□□□□ 0.75
UPF3AP2-202ENST00000578315 PTF1AQ7RTS3 328 aa19.71■□□□□ 0.75
UPF3AP2-202ENST00000578315 DDB1Q16531 1140 aa19.7■□□□□ 0.74
UPF3AP2-202ENST00000578315 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
UPF3AP2-202ENST00000578315 LRRC37A3O60309 1634 aa19.69■□□□□ 0.74
UPF3AP2-202ENST00000578315 QRICH2Q9H0J4 1663 aa19.68■□□□□ 0.74
UPF3AP2-202ENST00000578315 USP6P35125 1406 aa19.68■□□□□ 0.74
UPF3AP2-202ENST00000578315 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
UPF3AP2-202ENST00000578315 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
UPF3AP2-202ENST00000578315 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
UPF3AP2-202ENST00000578315 AXIN2Q9Y2T1 843 aa19.67■□□□□ 0.74
UPF3AP2-202ENST00000578315 SBF2Q86WG5 1849 aa19.67■□□□□ 0.74
UPF3AP2-202ENST00000578315 SLIT3O75094 1523 aa19.66■□□□□ 0.74
UPF3AP2-202ENST00000578315 SOX12O15370 315 aa19.66■□□□□ 0.74
UPF3AP2-202ENST00000578315 PDGFDQ9GZP0 370 aaPredicted RBP19.66■□□□□ 0.74
UPF3AP2-202ENST00000578315 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
UPF3AP2-202ENST00000578315 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
UPF3AP2-202ENST00000578315 PLSCR1O15162 318 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms