RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TESK2Q96S53 571 aa15.66■□□□□ 0.1
CDK5RAP3-204ENST00000577664 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
CDK5RAP3-204ENST00000577664 ADGRB2O60241 1585 aa15.66■□□□□ 0.1
CDK5RAP3-204ENST00000577664 ST20-MTHFSA0A0A6YYL1 179 aa15.65■□□□□ 0.1
CDK5RAP3-204ENST00000577664 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
CDK5RAP3-204ENST00000577664 RREB1Q92766 1687 aa15.64■□□□□ 0.09
CDK5RAP3-204ENST00000577664 STK26Q9P289 416 aa15.64■□□□□ 0.09
CDK5RAP3-204ENST00000577664 PPP1R1BQ9UD71 204 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-204ENST00000577664 ROBO2Q9HCK4 1378 aa15.63■□□□□ 0.09
CDK5RAP3-204ENST00000577664 ARHGEF28Q8N1W1 1705 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-204ENST00000577664 KCNQ2O43526 872 aa15.63■□□□□ 0.09
CDK5RAP3-204ENST00000577664 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-204ENST00000577664 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-204ENST00000577664 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
CDK5RAP3-204ENST00000577664 SPATA31A3Q5VYP0 1347 aa15.62■□□□□ 0.09
CDK5RAP3-204ENST00000577664 CHD4Q14839 1912 aa15.61■□□□□ 0.09
CDK5RAP3-204ENST00000577664 FOXO3O43524 673 aa15.61■□□□□ 0.09
CDK5RAP3-204ENST00000577664 NUP188Q5SRE5 1749 aa15.6■□□□□ 0.09
CDK5RAP3-204ENST00000577664 ESCO1Q5FWF5 840 aa15.6■□□□□ 0.09
CDK5RAP3-204ENST00000577664 WAPLQ7Z5K2 1190 aa15.6■□□□□ 0.09
CDK5RAP3-204ENST00000577664 CDC42BPGQ6DT37 1551 aa15.59■□□□□ 0.09
CDK5RAP3-204ENST00000577664 POGKQ9P215 609 aa15.59■□□□□ 0.09
CDK5RAP3-204ENST00000577664 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-204ENST00000577664 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-204ENST00000577664 FAM98CQ17RN3 349 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-204ENST00000577664 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.08
CDK5RAP3-204ENST00000577664 THSD7AQ9UPZ6 1657 aa15.57■□□□□ 0.08
CDK5RAP3-204ENST00000577664 NRAPQ86VF7 1730 aa15.57■□□□□ 0.08
CDK5RAP3-204ENST00000577664 FAM182BQ5T319 152 aa15.56■□□□□ 0.08
CDK5RAP3-204ENST00000577664 NBPF14Q5TI25 921 aa15.56■□□□□ 0.08
CDK5RAP3-204ENST00000577664 A0A0G2JS52 829 aa15.55■□□□□ 0.08
CDK5RAP3-204ENST00000577664 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-204ENST00000577664 TMF1P82094 1093 aa15.55■□□□□ 0.08
CDK5RAP3-204ENST00000577664 MYT1Q01538 1121 aa15.55■□□□□ 0.08
CDK5RAP3-204ENST00000577664 EVC2Q86UK5 1308 aa15.54■□□□□ 0.08
CDK5RAP3-204ENST00000577664 C11orf95C9JLR9 678 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-204ENST00000577664 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
CDK5RAP3-204ENST00000577664 QRICH2Q9H0J4 1663 aa15.54■□□□□ 0.08
CDK5RAP3-204ENST00000577664 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-204ENST00000577664 ABCA3Q99758 1704 aa15.53■□□□□ 0.08
CDK5RAP3-204ENST00000577664 GIGYF1O75420 1035 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-204ENST00000577664 TRIM37O94972 964 aa15.52■□□□□ 0.08
CDK5RAP3-204ENST00000577664 APBA3O96018 575 aa15.52■□□□□ 0.08
CDK5RAP3-204ENST00000577664 FAM196AQ6ZSG2 479 aa15.52■□□□□ 0.08
CDK5RAP3-204ENST00000577664 HIRIP3Q9BW71 556 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-204ENST00000577664 NRKQ7Z2Y5 1582 aa15.5■□□□□ 0.07
CDK5RAP3-204ENST00000577664 MINK1Q8N4C8 1332 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-204ENST00000577664 FAM83GA6ND36 823 aa15.5■□□□□ 0.07
CDK5RAP3-204ENST00000577664 SAFB2Q14151 953 aaKnown RBP eCLIP15.5■□□□□ 0.07
CDK5RAP3-204ENST00000577664 CDK19Q9BWU1 502 aa15.5■□□□□ 0.07
CDK5RAP3-204ENST00000577664 TNS3Q68CZ2 1445 aa15.5■□□□□ 0.07
CDK5RAP3-204ENST00000577664 SPATA31A5Q5VU36 1347 aa15.49■□□□□ 0.07
CDK5RAP3-204ENST00000577664 WASHC2AQ641Q2 1341 aa15.49■□□□□ 0.07
CDK5RAP3-204ENST00000577664 SPATA31A7Q8IWB4 1347 aa15.49■□□□□ 0.07
CDK5RAP3-204ENST00000577664 TULP4Q9NRJ4 1543 aa15.49■□□□□ 0.07
CDK5RAP3-204ENST00000577664 KIF1AQ12756 1690 aa15.49■□□□□ 0.07
CDK5RAP3-204ENST00000577664 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
CDK5RAP3-204ENST00000577664 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
CDK5RAP3-204ENST00000577664 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-204ENST00000577664 CCDC7Q96M83 1385 aa15.48■□□□□ 0.07
CDK5RAP3-204ENST00000577664 CABLES1Q8TDN4 633 aa15.47■□□□□ 0.07
CDK5RAP3-204ENST00000577664 ANKARQ7Z5J8 1434 aa15.46■□□□□ 0.07
CDK5RAP3-204ENST00000577664 KRT28Q7Z3Y7 464 aa15.46■□□□□ 0.07
CDK5RAP3-204ENST00000577664 MYOM1P52179 1685 aa15.45■□□□□ 0.06
CDK5RAP3-204ENST00000577664 PTGER2P43116 358 aa15.45■□□□□ 0.06
CDK5RAP3-204ENST00000577664 SYT17Q9BSW7 474 aa15.45■□□□□ 0.06
CDK5RAP3-204ENST00000577664 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
CDK5RAP3-204ENST00000577664 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
CDK5RAP3-204ENST00000577664 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
CDK5RAP3-204ENST00000577664 NUDT16Q96DE0 195 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-204ENST00000577664 SBNO1A3KN83 1393 aa15.44■□□□□ 0.06
CDK5RAP3-204ENST00000577664 COL14A1Q05707 1796 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-204ENST00000577664 SRPK2P78362 688 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-204ENST00000577664 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
CDK5RAP3-204ENST00000577664 ARHGEF10O15013 1369 aa15.43■□□□□ 0.06
CDK5RAP3-204ENST00000577664 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
CDK5RAP3-204ENST00000577664 PRR36Q9H6K5 1346 aa15.43■□□□□ 0.06
CDK5RAP3-204ENST00000577664 ATP7BP35670 1465 aa15.41■□□□□ 0.06
CDK5RAP3-204ENST00000577664 PSME1Q06323 249 aa15.41■□□□□ 0.06
CDK5RAP3-204ENST00000577664 RGPD3A6NKT7 1758 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-204ENST00000577664 RGPD4Q7Z3J3 1758 aa15.41■□□□□ 0.06
CDK5RAP3-204ENST00000577664 FHDC1Q9C0D6 1143 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-204ENST00000577664 SHANK3Q9BYB0 1731 aa15.39■□□□□ 0.05
CDK5RAP3-204ENST00000577664 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-204ENST00000577664 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
CDK5RAP3-204ENST00000577664 CABP1Q9NZU7 370 aa15.38■□□□□ 0.05
CDK5RAP3-204ENST00000577664 SPATA31A1Q5TZJ5 1347 aa15.38■□□□□ 0.05
CDK5RAP3-204ENST00000577664 POLR3AO14802 1390 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-204ENST00000577664 MAP3K5Q99683 1374 aa15.37■□□□□ 0.05
CDK5RAP3-204ENST00000577664 CPSF1Q10570 1443 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-204ENST00000577664 NUTM2FA1L443 756 aa15.37■□□□□ 0.05
CDK5RAP3-204ENST00000577664 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-204ENST00000577664 TOPAZ1Q8N9V7 1692 aa15.37■□□□□ 0.05
CDK5RAP3-204ENST00000577664 CD163L1Q9NR16 1453 aa15.36■□□□□ 0.05
CDK5RAP3-204ENST00000577664 SGIP1Q9BQI5 828 aa15.36■□□□□ 0.05
CDK5RAP3-204ENST00000577664 ANO8Q9HCE9 1232 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-204ENST00000577664 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
CDK5RAP3-204ENST00000577664 PPIP5K1Q6PFW1 1433 aa15.35■□□□□ 0.05
CDK5RAP3-204ENST00000577664 PDGFDQ9GZP0 370 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-204ENST00000577664 BRD4O60885 1362 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms