RNA–Protein interactions for RNA: ENST00000577535.1

TNFAIP1-203, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-203ENST00000577535 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
TNFAIP1-203ENST00000577535 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.36
TNFAIP1-203ENST00000577535 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.36
TNFAIP1-203ENST00000577535 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
TNFAIP1-203ENST00000577535 PPIP5K1Q6PFW1 1433 aa17.26■□□□□ 0.35
TNFAIP1-203ENST00000577535 VPS72Q15906 364 aa17.25■□□□□ 0.35
TNFAIP1-203ENST00000577535 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
TNFAIP1-203ENST00000577535 ABTB2Q8N961 1025 aa17.24■□□□□ 0.35
TNFAIP1-203ENST00000577535 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
TNFAIP1-203ENST00000577535 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
TNFAIP1-203ENST00000577535 BRD4O60885 1362 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP1-203ENST00000577535 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
TNFAIP1-203ENST00000577535 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
TNFAIP1-203ENST00000577535 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
TNFAIP1-203ENST00000577535 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
TNFAIP1-203ENST00000577535 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
TNFAIP1-203ENST00000577535 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
TNFAIP1-203ENST00000577535 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
TNFAIP1-203ENST00000577535 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
TNFAIP1-203ENST00000577535 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
TNFAIP1-203ENST00000577535 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
TNFAIP1-203ENST00000577535 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
TNFAIP1-203ENST00000577535 SBNO2Q9Y2G9 1366 aa17.18■□□□□ 0.34
TNFAIP1-203ENST00000577535 ZC3H6P61129 1189 aaKnown RBP17.18■□□□□ 0.34
TNFAIP1-203ENST00000577535 NWD2Q9ULI1 1742 aa17.18■□□□□ 0.34
TNFAIP1-203ENST00000577535 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
TNFAIP1-203ENST00000577535 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
TNFAIP1-203ENST00000577535 GLI3P10071 1580 aa17.16■□□□□ 0.34
TNFAIP1-203ENST00000577535 USP6P35125 1406 aa17.16■□□□□ 0.34
TNFAIP1-203ENST00000577535 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-203ENST00000577535 PLCH1Q4KWH8 1693 aa17.16■□□□□ 0.34
TNFAIP1-203ENST00000577535 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
TNFAIP1-203ENST00000577535 GCP02774 474 aa17.15■□□□□ 0.34
TNFAIP1-203ENST00000577535 NLRP6P59044 892 aa17.15■□□□□ 0.34
TNFAIP1-203ENST00000577535 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
TNFAIP1-203ENST00000577535 CCDC125Q86Z20 511 aa17.15■□□□□ 0.34
TNFAIP1-203ENST00000577535 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
TNFAIP1-203ENST00000577535 USP19O94966 1318 aa17.15■□□□□ 0.34
TNFAIP1-203ENST00000577535 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
TNFAIP1-203ENST00000577535 EVA1CP58658 441 aa17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 CPDO75976 1380 aa17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 CRYBG1Q9Y4K1 1723 aa17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
TNFAIP1-203ENST00000577535 A0A0G2JS52 829 aa17.12■□□□□ 0.33
TNFAIP1-203ENST00000577535 MYT1Q01538 1121 aa17.12■□□□□ 0.33
TNFAIP1-203ENST00000577535 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
TNFAIP1-203ENST00000577535 TTC21BQ7Z4L5 1316 aa17.12■□□□□ 0.33
TNFAIP1-203ENST00000577535 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
TNFAIP1-203ENST00000577535 STRN4Q9NRL3 753 aa17.11■□□□□ 0.33
TNFAIP1-203ENST00000577535 ST20-MTHFSA0A0A6YYL1 179 aa17.1■□□□□ 0.33
TNFAIP1-203ENST00000577535 TMC1Q8TDI8 760 aa17.1■□□□□ 0.33
TNFAIP1-203ENST00000577535 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
TNFAIP1-203ENST00000577535 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
TNFAIP1-203ENST00000577535 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
TNFAIP1-203ENST00000577535 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
TNFAIP1-203ENST00000577535 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
TNFAIP1-203ENST00000577535 NRAPQ86VF7 1730 aa17.09■□□□□ 0.33
TNFAIP1-203ENST00000577535 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP1-203ENST00000577535 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
TNFAIP1-203ENST00000577535 TESK2Q96S53 571 aa17.08■□□□□ 0.32
TNFAIP1-203ENST00000577535 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
TNFAIP1-203ENST00000577535 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
TNFAIP1-203ENST00000577535 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
TNFAIP1-203ENST00000577535 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
TNFAIP1-203ENST00000577535 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
TNFAIP1-203ENST00000577535 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
TNFAIP1-203ENST00000577535 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
TNFAIP1-203ENST00000577535 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
TNFAIP1-203ENST00000577535 AATKQ6ZMQ8 1374 aa17.04■□□□□ 0.32
TNFAIP1-203ENST00000577535 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
TNFAIP1-203ENST00000577535 BARGINQ6ZT62 677 aa17.04■□□□□ 0.32
TNFAIP1-203ENST00000577535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
TNFAIP1-203ENST00000577535 SLIT3O75094 1523 aa17.04■□□□□ 0.32
TNFAIP1-203ENST00000577535 TCP11L2Q8N4U5 519 aa17.03■□□□□ 0.32
TNFAIP1-203ENST00000577535 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
TNFAIP1-203ENST00000577535 EP400Q96L91 3159 aa17.02■□□□□ 0.32
TNFAIP1-203ENST00000577535 TMF1P82094 1093 aa17.02■□□□□ 0.32
TNFAIP1-203ENST00000577535 ARHGEF25Q86VW2 580 aa17.02■□□□□ 0.32
TNFAIP1-203ENST00000577535 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
TNFAIP1-203ENST00000577535 USP47Q96K76 1375 aa17.02■□□□□ 0.31
TNFAIP1-203ENST00000577535 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.31
TNFAIP1-203ENST00000577535 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
TNFAIP1-203ENST00000577535 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
TNFAIP1-203ENST00000577535 SOX12O15370 315 aa17.01■□□□□ 0.31
TNFAIP1-203ENST00000577535 AKAP12Q02952 1782 aa17.01■□□□□ 0.31
TNFAIP1-203ENST00000577535 USP31Q70CQ4 1352 aa17.01■□□□□ 0.31
TNFAIP1-203ENST00000577535 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
TNFAIP1-203ENST00000577535 LMO7Q8WWI1 1683 aa17■□□□□ 0.31
TNFAIP1-203ENST00000577535 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
TNFAIP1-203ENST00000577535 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
TNFAIP1-203ENST00000577535 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
TNFAIP1-203ENST00000577535 CDCA8Q53HL2 280 aa16.99■□□□□ 0.31
TNFAIP1-203ENST00000577535 NME9Q86XW9 330 aa16.99■□□□□ 0.31
TNFAIP1-203ENST00000577535 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
TNFAIP1-203ENST00000577535 CRB1P82279 1406 aa16.98■□□□□ 0.31
TNFAIP1-203ENST00000577535 TOM1L2Q6ZVM7 507 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms