RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 CCER1Q8TC90 406 aaPredicted RBP37.42■■■■□ 3.58
PPP4R1-204ENST00000577393 CABP1Q9NZU7 370 aa37.41■■■■□ 3.58
PPP4R1-204ENST00000577393 SBNO2Q9Y2G9 1366 aa37.41■■■■□ 3.58
PPP4R1-204ENST00000577393 ABCA3Q99758 1704 aa37.36■■■■□ 3.57
PPP4R1-204ENST00000577393 RBM6P78332 1123 aaKnown RBP37.33■■■■□ 3.57
PPP4R1-204ENST00000577393 TRPC5Q9UL62 973 aaPredicted RBP37.33■■■■□ 3.57
PPP4R1-204ENST00000577393 BCL9LQ86UU0 1499 aa37.33■■■■□ 3.57
PPP4R1-204ENST00000577393 ATAD2Q6PL18 1390 aa37.29■■■■□ 3.56
PPP4R1-204ENST00000577393 ST20-MTHFSA0A0A6YYL1 179 aa37.29■■■■□ 3.56
PPP4R1-204ENST00000577393 NUTM2GQ5VZR2 741 aa37.29■■■■□ 3.56
PPP4R1-204ENST00000577393 SLIT2O94813 1529 aa37.29■■■■□ 3.56
PPP4R1-204ENST00000577393 ATRNO75882 1429 aa37.28■■■■□ 3.56
PPP4R1-204ENST00000577393 FAM83GA6ND36 823 aa37.26■■■■□ 3.56
PPP4R1-204ENST00000577393 ABTB2Q8N961 1025 aa37.26■■■■□ 3.56
PPP4R1-204ENST00000577393 CDK12Q9NYV4 1490 aaPredicted RBP37.26■■■■□ 3.55
PPP4R1-204ENST00000577393 UNC5CLQ8IV45 518 aa37.25■■■■□ 3.55
PPP4R1-204ENST00000577393 TESK2Q96S53 571 aa37.25■■■■□ 3.55
PPP4R1-204ENST00000577393 BRD4O60885 1362 aaPredicted RBP37.25■■■■□ 3.55
PPP4R1-204ENST00000577393 USP6P35125 1406 aa37.25■■■■□ 3.55
PPP4R1-204ENST00000577393 CRYBG1Q9Y4K1 1723 aa37.24■■■■□ 3.55
PPP4R1-204ENST00000577393 USP47Q96K76 1375 aa37.2■■■■□ 3.55
PPP4R1-204ENST00000577393 ZNF692Q9BU19 519 aaPredicted RBP37.2■■■■□ 3.55
PPP4R1-204ENST00000577393 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.19■■■■□ 3.54
PPP4R1-204ENST00000577393 RGS12O14924 1447 aa37.18■■■■□ 3.54
PPP4R1-204ENST00000577393 SSH2Q76I76 1423 aa37.18■■■■□ 3.54
PPP4R1-204ENST00000577393 PLCH1Q4KWH8 1693 aa37.17■■■■□ 3.54
PPP4R1-204ENST00000577393 NLRP13Q86W25 1043 aa37.16■■■■□ 3.54
PPP4R1-204ENST00000577393 GJD4Q96KN9 370 aaPredicted RBP37.16■■■■□ 3.54
PPP4R1-204ENST00000577393 PUS7Q96PZ0 661 aaKnown RBP37.16■■■■□ 3.54
PPP4R1-204ENST00000577393 PHRF1Q9P1Y6 1649 aaKnown RBP37.15■■■■□ 3.54
PPP4R1-204ENST00000577393 CPSF1Q10570 1443 aaKnown RBP37.15■■■■□ 3.54
PPP4R1-204ENST00000577393 NWD2Q9ULI1 1742 aa37.14■■■■□ 3.54
PPP4R1-204ENST00000577393 SLC24A1O60721 1099 aa37.14■■■■□ 3.54
PPP4R1-204ENST00000577393 TMC1Q8TDI8 760 aa37.14■■■■□ 3.54
PPP4R1-204ENST00000577393 USP19O94966 1318 aa37.13■■■■□ 3.54
PPP4R1-204ENST00000577393 PRDM11Q9NQV5 511 aa37.13■■■■□ 3.53
PPP4R1-204ENST00000577393 AKAP12Q02952 1782 aa37.13■■■■□ 3.53
PPP4R1-204ENST00000577393 BTG4Q9NY30 223 aa37.12■■■■□ 3.53
PPP4R1-204ENST00000577393 KIAA0232Q92628 1395 aa37.12■■■■□ 3.53
PPP4R1-204ENST00000577393 COL14A1Q05707 1796 aaKnown RBP37.12■■■■□ 3.53
PPP4R1-204ENST00000577393 TTC21BQ7Z4L5 1316 aa37.11■■■■□ 3.53
PPP4R1-204ENST00000577393 ZC3H6P61129 1189 aaKnown RBP37.11■■■■□ 3.53
PPP4R1-204ENST00000577393 SLC12A5Q9H2X9 1139 aa37.11■■■■□ 3.53
PPP4R1-204ENST00000577393 KTN1Q86UP2 1357 aaKnown RBP37.1■■■■□ 3.53
PPP4R1-204ENST00000577393 NLRP6P59044 892 aa37.1■■■■□ 3.53
PPP4R1-204ENST00000577393 VPS72Q15906 364 aa37.1■■■■□ 3.53
PPP4R1-204ENST00000577393 CHRNA2Q15822 529 aa37.07■■■■□ 3.52
PPP4R1-204ENST00000577393 GCP02774 474 aa37.06■■■■□ 3.52
PPP4R1-204ENST00000577393 NRKQ7Z2Y5 1582 aa37.06■■■■□ 3.52
PPP4R1-204ENST00000577393 CD163L1Q9NR16 1453 aa37.06■■■■□ 3.52
PPP4R1-204ENST00000577393 CCDC9Q9Y3X0 531 aaKnown RBP37.05■■■■□ 3.52
PPP4R1-204ENST00000577393 TTC21AQ8NDW8 1320 aa37.05■■■■□ 3.52
PPP4R1-204ENST00000577393 GLI3P10071 1580 aa37.04■■■■□ 3.52
PPP4R1-204ENST00000577393 TMF1P82094 1093 aa37.04■■■■□ 3.52
PPP4R1-204ENST00000577393 PIK3C2AO00443 1686 aa37.04■■■■□ 3.52
PPP4R1-204ENST00000577393 NRAPQ86VF7 1730 aa37.03■■■■□ 3.52
PPP4R1-204ENST00000577393 HDGFL2Q7Z4V5 671 aaPredicted RBP37.03■■■■□ 3.52
PPP4R1-204ENST00000577393 MON2Q7Z3U7 1717 aa37.02■■■■□ 3.52
PPP4R1-204ENST00000577393 TERF2IPQ9NYB0 399 aa37■■■■□ 3.51
PPP4R1-204ENST00000577393 CPDO75976 1380 aa37■■■■□ 3.51
PPP4R1-204ENST00000577393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.98■■■■□ 3.51
PPP4R1-204ENST00000577393 SLIT3O75094 1523 aa36.97■■■■□ 3.51
PPP4R1-204ENST00000577393 NINLQ9Y2I6 1382 aa36.97■■■■□ 3.51
PPP4R1-204ENST00000577393 A0A1W2PP64 1363 aa36.96■■■■□ 3.51
PPP4R1-204ENST00000577393 UPF1Q92900 1129 aaKnown RBP eCLIP36.95■■■■□ 3.51
PPP4R1-204ENST00000577393 STRN4Q9NRL3 753 aa36.92■■■■□ 3.5
PPP4R1-204ENST00000577393 EDC4Q6P2E9 1401 aaKnown RBP36.92■■■■□ 3.5
PPP4R1-204ENST00000577393 ONECUT3O60422 494 aaPredicted RBP36.91■■■■□ 3.5
PPP4R1-204ENST00000577393 CDCA8Q53HL2 280 aa36.91■■■■□ 3.5
PPP4R1-204ENST00000577393 ZRANB1Q9UGI0 708 aa36.91■■■■□ 3.5
PPP4R1-204ENST00000577393 SPATA31A5Q5VU36 1347 aa36.9■■■■□ 3.5
PPP4R1-204ENST00000577393 SPATA31A7Q8IWB4 1347 aa36.9■■■■□ 3.5
PPP4R1-204ENST00000577393 NME9Q86XW9 330 aa36.9■■■■□ 3.5
PPP4R1-204ENST00000577393 SEPT12Q8IYM1 358 aa36.9■■■■□ 3.5
PPP4R1-204ENST00000577393 CAMTA1Q9Y6Y1 1673 aa36.9■■■■□ 3.5
PPP4R1-204ENST00000577393 ZBTB7CA1YPR0 619 aa36.89■■■■□ 3.5
PPP4R1-204ENST00000577393 KCNH5Q8NCM2 988 aa36.89■■■■□ 3.5
PPP4R1-204ENST00000577393 EVA1CP58658 441 aa36.88■■■■□ 3.49
PPP4R1-204ENST00000577393 USP31Q70CQ4 1352 aa36.88■■■■□ 3.49
PPP4R1-204ENST00000577393 LMO7Q8WWI1 1683 aa36.87■■■■□ 3.49
PPP4R1-204ENST00000577393 SOX12O15370 315 aa36.87■■■■□ 3.49
PPP4R1-204ENST00000577393 FAM98CQ17RN3 349 aaKnown RBP36.86■■■■□ 3.49
PPP4R1-204ENST00000577393 EIF4G2P78344 907 aaKnown RBP eCLIP36.85■■■■□ 3.49
PPP4R1-204ENST00000577393 AATKQ6ZMQ8 1374 aa36.84■■■■□ 3.49
PPP4R1-204ENST00000577393 ANKRD36BQ8N2N9 1353 aa36.83■■■■□ 3.49
PPP4R1-204ENST00000577393 SPATA31A1Q5TZJ5 1347 aa36.83■■■■□ 3.49
PPP4R1-204ENST00000577393 HSPA5P11021 654 aaKnown RBP36.82■■■■□ 3.48
PPP4R1-204ENST00000577393 ARHGEF25Q86VW2 580 aa36.82■■■■□ 3.48
PPP4R1-204ENST00000577393 A0A0G2JS52 829 aa36.8■■■■□ 3.48
PPP4R1-204ENST00000577393 MYT1Q01538 1121 aa36.8■■■■□ 3.48
PPP4R1-204ENST00000577393 LARP1Q6PKG0 1096 aaKnown RBP36.8■■■■□ 3.48
PPP4R1-204ENST00000577393 BRWD3Q6RI45 1802 aa36.79■■■■□ 3.48
PPP4R1-204ENST00000577393 USP54Q70EL1 1684 aa36.79■■■■□ 3.48
PPP4R1-204ENST00000577393 NFAT5O94916 1531 aa36.79■■■■□ 3.48
PPP4R1-204ENST00000577393 COL5A2P05997 1499 aaPredicted RBP36.77■■■■□ 3.48
PPP4R1-204ENST00000577393 USP35Q9P2H5 1018 aa36.76■■■■□ 3.48
PPP4R1-204ENST00000577393 AXIN2Q9Y2T1 843 aa36.76■■■■□ 3.48
PPP4R1-204ENST00000577393 COL18A1P39060 1754 aa36.76■■■■□ 3.47
PPP4R1-204ENST00000577393 KRT27Q7Z3Y8 459 aa36.73■■■■□ 3.47
PPP4R1-204ENST00000577393 OVOS2A0A0J9YW53 1432 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms