RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
MKS1-205ENST00000577315 BRWD3Q6RI45 1802 aa21.49■■□□□ 1.03
MKS1-205ENST00000577315 QRICH2Q9H0J4 1663 aa21.49■■□□□ 1.03
MKS1-205ENST00000577315 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
MKS1-205ENST00000577315 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
MKS1-205ENST00000577315 FAM83GA6ND36 823 aa21.48■■□□□ 1.03
MKS1-205ENST00000577315 NRAPQ86VF7 1730 aa21.48■■□□□ 1.03
MKS1-205ENST00000577315 TRPM1Q7Z4N2 1603 aa21.47■■□□□ 1.03
MKS1-205ENST00000577315 CCDC9Q9Y3X0 531 aaKnown RBP21.46■■□□□ 1.03
MKS1-205ENST00000577315 SIN3AQ96ST3 1273 aa21.45■■□□□ 1.02
MKS1-205ENST00000577315 ACEP12821 1306 aa21.45■■□□□ 1.02
MKS1-205ENST00000577315 ONECUT3O60422 494 aaPredicted RBP21.44■■□□□ 1.02
MKS1-205ENST00000577315 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
MKS1-205ENST00000577315 NBPF8Q3BBV2 869 aa21.44■■□□□ 1.02
MKS1-205ENST00000577315 PHRF1Q9P1Y6 1649 aaKnown RBP21.44■■□□□ 1.02
MKS1-205ENST00000577315 BTG4Q9NY30 223 aa21.43■■□□□ 1.02
MKS1-205ENST00000577315 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
MKS1-205ENST00000577315 SEPT12Q8IYM1 358 aa21.42■■□□□ 1.02
MKS1-205ENST00000577315 BRD4O60885 1362 aaPredicted RBP21.41■■□□□ 1.02
MKS1-205ENST00000577315 PRDM11Q9NQV5 511 aa21.41■■□□□ 1.02
MKS1-205ENST00000577315 PPIP5K1Q6PFW1 1433 aa21.4■■□□□ 1.02
MKS1-205ENST00000577315 ROCK2O75116 1388 aaKnown RBP21.39■■□□□ 1.02
MKS1-205ENST00000577315 CABP2Q9NPB3 220 aa21.38■■□□□ 1.01
MKS1-205ENST00000577315 EP400Q96L91 3159 aa21.38■■□□□ 1.01
MKS1-205ENST00000577315 BLMP54132 1417 aaPredicted RBP21.38■■□□□ 1.01
MKS1-205ENST00000577315 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
MKS1-205ENST00000577315 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
MKS1-205ENST00000577315 ABTB2Q8N961 1025 aa21.37■■□□□ 1.01
MKS1-205ENST00000577315 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
MKS1-205ENST00000577315 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
MKS1-205ENST00000577315 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
MKS1-205ENST00000577315 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
MKS1-205ENST00000577315 A0A0G2JS52 829 aa21.34■■□□□ 1.01
MKS1-205ENST00000577315 MYT1Q01538 1121 aa21.34■■□□□ 1.01
MKS1-205ENST00000577315 SF3B2Q13435 895 aaKnown RBP21.34■■□□□ 1.01
MKS1-205ENST00000577315 NRKQ7Z2Y5 1582 aa21.33■■□□□ 1.01
MKS1-205ENST00000577315 FAM98CQ17RN3 349 aaKnown RBP21.33■■□□□ 1.01
MKS1-205ENST00000577315 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
MKS1-205ENST00000577315 ZC3H6P61129 1189 aaKnown RBP21.32■■□□□ 1
MKS1-205ENST00000577315 USP19O94966 1318 aa21.31■■□□□ 1
MKS1-205ENST00000577315 CABP1Q9NZU7 370 aa21.31■■□□□ 1
MKS1-205ENST00000577315 ZRANB1Q9UGI0 708 aa21.31■■□□□ 1
MKS1-205ENST00000577315 CPDO75976 1380 aa21.31■■□□□ 1
MKS1-205ENST00000577315 USP6P35125 1406 aa21.3■■□□□ 1
MKS1-205ENST00000577315 AKAP12Q02952 1782 aa21.29■■□□□ 1
MKS1-205ENST00000577315 THSD7AQ9UPZ6 1657 aa21.29■■□□□ 1
MKS1-205ENST00000577315 TONSLQ96HA7 1378 aa21.29■■□□□ 1
MKS1-205ENST00000577315 CHRNA2Q15822 529 aa21.29■■□□□ 1
MKS1-205ENST00000577315 ZNF692Q9BU19 519 aaPredicted RBP21.29■■□□□ 1
MKS1-205ENST00000577315 SPATA31A1Q5TZJ5 1347 aa21.28■■□□□ 1
MKS1-205ENST00000577315 SBNO2Q9Y2G9 1366 aa21.27■■□□□ 1
MKS1-205ENST00000577315 EVA1CP58658 441 aa21.27■■□□□ 1
MKS1-205ENST00000577315 STRN4Q9NRL3 753 aa21.27■■□□□ 1
MKS1-205ENST00000577315 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
MKS1-205ENST00000577315 GCP02774 474 aa21.26■□□□□ 0.99
MKS1-205ENST00000577315 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
MKS1-205ENST00000577315 RGPD1P0DJD0 1748 aa21.26■□□□□ 0.99
MKS1-205ENST00000577315 SSH2Q76I76 1423 aa21.25■□□□□ 0.99
MKS1-205ENST00000577315 NLRP6P59044 892 aa21.24■□□□□ 0.99
MKS1-205ENST00000577315 CARD11Q9BXL7 1154 aa21.24■□□□□ 0.99
MKS1-205ENST00000577315 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
MKS1-205ENST00000577315 SLIT3O75094 1523 aa21.23■□□□□ 0.99
MKS1-205ENST00000577315 PIK3C2AO00443 1686 aa21.22■□□□□ 0.99
MKS1-205ENST00000577315 BAG6P46379 1132 aa21.22■□□□□ 0.99
MKS1-205ENST00000577315 BARGINQ6ZT62 677 aa21.22■□□□□ 0.99
MKS1-205ENST00000577315 DEFB132Q7Z7B7 95 aa21.21■□□□□ 0.99
MKS1-205ENST00000577315 THRAP3Q9Y2W1 955 aaKnown RBP21.21■□□□□ 0.99
MKS1-205ENST00000577315 TTC21AQ8NDW8 1320 aa21.21■□□□□ 0.99
MKS1-205ENST00000577315 MON2Q7Z3U7 1717 aa21.19■□□□□ 0.98
MKS1-205ENST00000577315 TTC21BQ7Z4L5 1316 aa21.19■□□□□ 0.98
MKS1-205ENST00000577315 CPSF1Q10570 1443 aaKnown RBP21.19■□□□□ 0.98
MKS1-205ENST00000577315 TCP11L2Q8N4U5 519 aa21.18■□□□□ 0.98
MKS1-205ENST00000577315 KCNH5Q8NCM2 988 aa21.18■□□□□ 0.98
MKS1-205ENST00000577315 USP35Q9P2H5 1018 aa21.18■□□□□ 0.98
MKS1-205ENST00000577315 AATKQ6ZMQ8 1374 aa21.18■□□□□ 0.98
MKS1-205ENST00000577315 COL5A2P05997 1499 aaPredicted RBP21.18■□□□□ 0.98
MKS1-205ENST00000577315 LARP1Q6PKG0 1096 aaKnown RBP21.17■□□□□ 0.98
MKS1-205ENST00000577315 FAM196AQ6ZSG2 479 aa21.17■□□□□ 0.98
MKS1-205ENST00000577315 COL18A1P39060 1754 aa21.16■□□□□ 0.98
MKS1-205ENST00000577315 KTN1Q86UP2 1357 aaKnown RBP21.16■□□□□ 0.98
MKS1-205ENST00000577315 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
MKS1-205ENST00000577315 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
MKS1-205ENST00000577315 PUS7Q96PZ0 661 aaKnown RBP21.15■□□□□ 0.98
MKS1-205ENST00000577315 TNS1Q9HBL0 1735 aaKnown RBP21.15■□□□□ 0.98
MKS1-205ENST00000577315 CRB1P82279 1406 aa21.14■□□□□ 0.98
MKS1-205ENST00000577315 PDE3BQ13370 1112 aa21.14■□□□□ 0.97
MKS1-205ENST00000577315 DISP2A7MBM2 1401 aa21.13■□□□□ 0.97
MKS1-205ENST00000577315 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
MKS1-205ENST00000577315 RGPD5Q99666 1765 aa21.13■□□□□ 0.97
MKS1-205ENST00000577315 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
MKS1-205ENST00000577315 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
MKS1-205ENST00000577315 FAM182BQ5T319 152 aa21.12■□□□□ 0.97
MKS1-205ENST00000577315 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
MKS1-205ENST00000577315 ARHGEF25Q86VW2 580 aa21.1■□□□□ 0.97
MKS1-205ENST00000577315 ABCC6O95255 1503 aa21.09■□□□□ 0.97
MKS1-205ENST00000577315 WNK3Q9BYP7 1800 aa21.09■□□□□ 0.97
MKS1-205ENST00000577315 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
MKS1-205ENST00000577315 USP31Q70CQ4 1352 aa21.09■□□□□ 0.97
MKS1-205ENST00000577315 EN1Q05925 392 aaPredicted RBP21.08■□□□□ 0.97
MKS1-205ENST00000577315 TOM1L2Q6ZVM7 507 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms