RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
CTNS-210ENST00000576979 BICRAQ9NZM4 1560 aa8.69□□□□□ -1.02
CTNS-210ENST00000576979 JUNDP17535 347 aa8.68□□□□□ -1.02
CTNS-210ENST00000576979 SH3BP2P78314 561 aa8.68□□□□□ -1.02
CTNS-210ENST00000576979 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
CTNS-210ENST00000576979 WRNQ14191 1432 aaPredicted RBP eCLIP8.67□□□□□ -1.02
CTNS-210ENST00000576979 MRPL14Q6P1L8 145 aaKnown RBP8.67□□□□□ -1.02
CTNS-210ENST00000576979 GDF11O95390 407 aa8.66□□□□□ -1.02
CTNS-210ENST00000576979 RASSF7Q02833 373 aa8.66□□□□□ -1.02
CTNS-210ENST00000576979 TMEM151AQ8N4L1 468 aa8.66□□□□□ -1.02
CTNS-210ENST00000576979 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
CTNS-210ENST00000576979 CEP162Q5TB80 1403 aa8.64□□□□□ -1.03
CTNS-210ENST00000576979 TNIKQ9UKE5 1360 aa8.64□□□□□ -1.03
CTNS-210ENST00000576979 HOXA2O43364 376 aa8.64□□□□□ -1.03
CTNS-210ENST00000576979 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
CTNS-210ENST00000576979 TESPA1A2RU30 521 aaPredicted RBP8.63□□□□□ -1.03
CTNS-210ENST00000576979 TIMP2P16035 220 aa8.63□□□□□ -1.03
CTNS-210ENST00000576979 NNTQ13423 1086 aa8.63□□□□□ -1.03
CTNS-210ENST00000576979 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
CTNS-210ENST00000576979 KIF21BO75037 1637 aa8.62□□□□□ -1.03
CTNS-210ENST00000576979 SCARF1Q14162 830 aa8.62□□□□□ -1.03
CTNS-210ENST00000576979 KRT76Q01546 638 aa8.61□□□□□ -1.03
CTNS-210ENST00000576979 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
CTNS-210ENST00000576979 SOGA1O94964 1423 aa8.61□□□□□ -1.03
CTNS-210ENST00000576979 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
CTNS-210ENST00000576979 WDR4P57081 412 aaKnown RBP8.6□□□□□ -1.03
CTNS-210ENST00000576979 BAP1Q92560 729 aa8.59□□□□□ -1.03
CTNS-210ENST00000576979 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
CTNS-210ENST00000576979 ADAMTS8Q9UP79 889 aa8.59□□□□□ -1.03
CTNS-210ENST00000576979 BAZ1BQ9UIG0 1483 aaKnown RBP8.58□□□□□ -1.04
CTNS-210ENST00000576979 SYNJ1O43426 1573 aa8.58□□□□□ -1.04
CTNS-210ENST00000576979 UBTFP17480 764 aaKnown RBP8.58□□□□□ -1.04
CTNS-210ENST00000576979 USP46P62068 366 aa8.58□□□□□ -1.04
CTNS-210ENST00000576979 P3H3Q8IVL6 736 aa8.58□□□□□ -1.04
CTNS-210ENST00000576979 KLF16Q9BXK1 252 aaPredicted RBP8.58□□□□□ -1.04
CTNS-210ENST00000576979 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
CTNS-210ENST00000576979 MAN1A2O60476 641 aa8.57□□□□□ -1.04
CTNS-210ENST00000576979 ADH1CP00326 375 aa8.57□□□□□ -1.04
CTNS-210ENST00000576979 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
CTNS-210ENST00000576979 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
CTNS-210ENST00000576979 UNC93B1Q9H1C4 597 aa8.57□□□□□ -1.04
CTNS-210ENST00000576979 RUSC2Q8N2Y8 1516 aa8.56□□□□□ -1.04
CTNS-210ENST00000576979 CCNYL3P0C7X3 344 aa8.56□□□□□ -1.04
CTNS-210ENST00000576979 MDM2Q00987 491 aaPredicted RBP8.56□□□□□ -1.04
CTNS-210ENST00000576979 GPAT2Q6NUI2 795 aa8.56□□□□□ -1.04
CTNS-210ENST00000576979 RETREG3Q86VR2 466 aa8.56□□□□□ -1.04
CTNS-210ENST00000576979 ZFAND3Q9H8U3 227 aa8.56□□□□□ -1.04
CTNS-210ENST00000576979 CNTNAP3BQ96NU0 1288 aa8.55□□□□□ -1.04
CTNS-210ENST00000576979 ARXQ96QS3 562 aa8.55□□□□□ -1.04
CTNS-210ENST00000576979 CNTNAP3Q9BZ76 1288 aa8.55□□□□□ -1.04
CTNS-210ENST00000576979 ATAD2BQ9ULI0 1458 aa8.55□□□□□ -1.04
CTNS-210ENST00000576979 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
CTNS-210ENST00000576979 MS4A1P11836 297 aa8.54□□□□□ -1.04
CTNS-210ENST00000576979 XP32Q5T750 250 aa8.54□□□□□ -1.04
CTNS-210ENST00000576979 BIVM-ERCC5R4GMW8 1640 aa8.54□□□□□ -1.04
CTNS-210ENST00000576979 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
CTNS-210ENST00000576979 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
CTNS-210ENST00000576979 TOP2BQ02880 1626 aa8.52□□□□□ -1.05
CTNS-210ENST00000576979 PLEKHG3A1L390 1219 aa8.52□□□□□ -1.05
CTNS-210ENST00000576979 VARSP26640 1264 aaKnown RBP8.52□□□□□ -1.05
CTNS-210ENST00000576979 SMYD5Q6GMV2 418 aa8.52□□□□□ -1.05
CTNS-210ENST00000576979 ITPKCQ96DU7 683 aa8.52□□□□□ -1.05
CTNS-210ENST00000576979 PRDM2Q13029 1718 aa8.51□□□□□ -1.05
CTNS-210ENST00000576979 RNF225M0QZC1 329 aaPredicted RBP8.51□□□□□ -1.05
CTNS-210ENST00000576979 ZIC2O95409 532 aaPredicted RBP8.51□□□□□ -1.05
CTNS-210ENST00000576979 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
CTNS-210ENST00000576979 GPIHBP1Q8IV16 184 aa8.51□□□□□ -1.05
CTNS-210ENST00000576979 EVA1BQ9NVM1 165 aa8.51□□□□□ -1.05
CTNS-210ENST00000576979 DNMT3LQ9UJW3 386 aa8.51□□□□□ -1.05
CTNS-210ENST00000576979 TTBK1Q5TCY1 1321 aaPredicted RBP8.51□□□□□ -1.05
CTNS-210ENST00000576979 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
CTNS-210ENST00000576979 NR3C2P08235 984 aa8.5□□□□□ -1.05
CTNS-210ENST00000576979 IRS1P35568 1242 aa8.5□□□□□ -1.05
CTNS-210ENST00000576979 ZNF385CQ66K41 422 aaPredicted RBP8.5□□□□□ -1.05
CTNS-210ENST00000576979 MPNDQ8N594 471 aa8.5□□□□□ -1.05
CTNS-210ENST00000576979 CLIP1P30622 1438 aa8.49□□□□□ -1.05
CTNS-210ENST00000576979 PTPRNQ16849 979 aa8.49□□□□□ -1.05
CTNS-210ENST00000576979 WHAMMQ8TF30 809 aa8.49□□□□□ -1.05
CTNS-210ENST00000576979 BMP2P12643 396 aa8.48□□□□□ -1.05
CTNS-210ENST00000576979 KCNH2Q12809 1159 aa8.48□□□□□ -1.05
CTNS-210ENST00000576979 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
CTNS-210ENST00000576979 GTF3C3Q9Y5Q9 886 aa8.48□□□□□ -1.05
CTNS-210ENST00000576979 VPS8Q8N3P4 1428 aa8.47□□□□□ -1.05
CTNS-210ENST00000576979 FDX1P10109 184 aa8.47□□□□□ -1.05
CTNS-210ENST00000576979 ARID5BQ14865 1188 aa8.47□□□□□ -1.05
CTNS-210ENST00000576979 COL25A1Q9BXS0 654 aaPredicted RBP8.47□□□□□ -1.05
CTNS-210ENST00000576979 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
CTNS-210ENST00000576979 HMGXB3Q12766 1538 aa8.47□□□□□ -1.05
CTNS-210ENST00000576979 ERICH3Q5RHP9 1530 aa8.46□□□□□ -1.05
CTNS-210ENST00000576979 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
CTNS-210ENST00000576979 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
CTNS-210ENST00000576979 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.06
CTNS-210ENST00000576979 CENPBP07199 599 aaPredicted RBP8.45□□□□□ -1.06
CTNS-210ENST00000576979 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
CTNS-210ENST00000576979 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
CTNS-210ENST00000576979 FOXJ1Q92949 421 aa8.45□□□□□ -1.06
CTNS-210ENST00000576979 DIEXFQ68CQ4 756 aaKnown RBP8.44□□□□□ -1.06
CTNS-210ENST00000576979 FAM174AQ8TBP5 190 aa8.44□□□□□ -1.06
CTNS-210ENST00000576979 MEIOBQ8N635 442 aa8.43□□□□□ -1.06
CTNS-210ENST00000576979 CDK15Q96Q40 435 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 485.3 ms