RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TRIM37O94972 964 aa15.02■□□□□ -0
NPLOC4-220ENST00000576940 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
NPLOC4-220ENST00000576940 NGDNQ8NEJ9 315 aaKnown RBP15.01□□□□□ -0.01
NPLOC4-220ENST00000576940 CAMKK2Q96RR4 588 aa15.01□□□□□ -0.01
NPLOC4-220ENST00000576940 PRDM11Q9NQV5 511 aa15.01□□□□□ -0.01
NPLOC4-220ENST00000576940 WASLO00401 505 aaPredicted RBP15□□□□□ -0.01
NPLOC4-220ENST00000576940 CHRNA2Q15822 529 aa15□□□□□ -0.01
NPLOC4-220ENST00000576940 STRN4Q9NRL3 753 aa15□□□□□ -0.01
NPLOC4-220ENST00000576940 TRPM3Q9HCF6 1732 aaPredicted RBP15□□□□□ -0.01
NPLOC4-220ENST00000576940 COL14A1Q05707 1796 aaKnown RBP14.99□□□□□ -0.01
NPLOC4-220ENST00000576940 APBA3O96018 575 aa14.99□□□□□ -0.01
NPLOC4-220ENST00000576940 KDM2AQ9Y2K7 1162 aa14.99□□□□□ -0.01
NPLOC4-220ENST00000576940 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
NPLOC4-220ENST00000576940 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
NPLOC4-220ENST00000576940 ZC3H6P61129 1189 aaKnown RBP14.98□□□□□ -0.01
NPLOC4-220ENST00000576940 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
NPLOC4-220ENST00000576940 USP35Q9P2H5 1018 aa14.98□□□□□ -0.01
NPLOC4-220ENST00000576940 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
NPLOC4-220ENST00000576940 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
NPLOC4-220ENST00000576940 NUTM2GQ5VZR2 741 aa14.97□□□□□ -0.01
NPLOC4-220ENST00000576940 DISP2A7MBM2 1401 aa14.96□□□□□ -0.01
NPLOC4-220ENST00000576940 KIAA0232Q92628 1395 aa14.96□□□□□ -0.02
NPLOC4-220ENST00000576940 THSD7AQ9UPZ6 1657 aa14.94□□□□□ -0.02
NPLOC4-220ENST00000576940 EVA1CP58658 441 aa14.94□□□□□ -0.02
NPLOC4-220ENST00000576940 NUDT16Q96DE0 195 aaKnown RBP14.94□□□□□ -0.02
NPLOC4-220ENST00000576940 TNS1Q9HBL0 1735 aaKnown RBP14.94□□□□□ -0.02
NPLOC4-220ENST00000576940 ADGRB1O14514 1584 aa14.94□□□□□ -0.02
NPLOC4-220ENST00000576940 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
NPLOC4-220ENST00000576940 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
NPLOC4-220ENST00000576940 DCAF11Q8TEB1 546 aa14.93□□□□□ -0.02
NPLOC4-220ENST00000576940 TULP4Q9NRJ4 1543 aa14.92□□□□□ -0.02
NPLOC4-220ENST00000576940 EIF3AQ14152 1382 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-220ENST00000576940 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
NPLOC4-220ENST00000576940 YY1P25490 414 aa14.91□□□□□ -0.02
NPLOC4-220ENST00000576940 NBPF8Q3BBV2 869 aa14.91□□□□□ -0.02
NPLOC4-220ENST00000576940 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
NPLOC4-220ENST00000576940 LARP1Q6PKG0 1096 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-220ENST00000576940 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
NPLOC4-220ENST00000576940 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
NPLOC4-220ENST00000576940 ACEP12821 1306 aa14.88□□□□□ -0.03
NPLOC4-220ENST00000576940 PARD3Q8TEW0 1356 aa14.87□□□□□ -0.03
NPLOC4-220ENST00000576940 TCP11L2Q8N4U5 519 aa14.87□□□□□ -0.03
NPLOC4-220ENST00000576940 ABTB2Q8N961 1025 aa14.87□□□□□ -0.03
NPLOC4-220ENST00000576940 SSH2Q76I76 1423 aa14.86□□□□□ -0.03
NPLOC4-220ENST00000576940 PPP1R1BQ9UD71 204 aaPredicted RBP14.86□□□□□ -0.03
NPLOC4-220ENST00000576940 ATP7BP35670 1465 aa14.86□□□□□ -0.03
NPLOC4-220ENST00000576940 CAMTA1Q9Y6Y1 1673 aa14.85□□□□□ -0.03
NPLOC4-220ENST00000576940 KCNQ2O43526 872 aa14.85□□□□□ -0.03
NPLOC4-220ENST00000576940 SPON1Q9HCB6 807 aa14.85□□□□□ -0.03
NPLOC4-220ENST00000576940 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
NPLOC4-220ENST00000576940 PLEKHG3A1L390 1219 aa14.84□□□□□ -0.03
NPLOC4-220ENST00000576940 PHRF1Q9P1Y6 1649 aaKnown RBP14.84□□□□□ -0.03
NPLOC4-220ENST00000576940 RAB3GAP2Q9H2M9 1393 aa14.84□□□□□ -0.03
NPLOC4-220ENST00000576940 POLR3AO14802 1390 aaPredicted RBP14.83□□□□□ -0.04
NPLOC4-220ENST00000576940 RREB1Q92766 1687 aa14.82□□□□□ -0.04
NPLOC4-220ENST00000576940 ZBTB7CA1YPR0 619 aa14.82□□□□□ -0.04
NPLOC4-220ENST00000576940 GCP02774 474 aa14.82□□□□□ -0.04
NPLOC4-220ENST00000576940 THRAP3Q9Y2W1 955 aaKnown RBP14.82□□□□□ -0.04
NPLOC4-220ENST00000576940 NUP188Q5SRE5 1749 aa14.82□□□□□ -0.04
NPLOC4-220ENST00000576940 PTF1AQ7RTS3 328 aa14.81□□□□□ -0.04
NPLOC4-220ENST00000576940 NLRP13Q86W25 1043 aa14.81□□□□□ -0.04
NPLOC4-220ENST00000576940 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
NPLOC4-220ENST00000576940 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
NPLOC4-220ENST00000576940 PDGFDQ9GZP0 370 aaPredicted RBP14.8□□□□□ -0.04
NPLOC4-220ENST00000576940 CPDO75976 1380 aa14.8□□□□□ -0.04
NPLOC4-220ENST00000576940 ITSN1Q15811 1721 aa14.8□□□□□ -0.04
NPLOC4-220ENST00000576940 USP19O94966 1318 aa14.79□□□□□ -0.04
NPLOC4-220ENST00000576940 ARHGEF28Q8N1W1 1705 aaKnown RBP14.79□□□□□ -0.04
NPLOC4-220ENST00000576940 UTRNP46939 3433 aa14.78□□□□□ -0.04
NPLOC4-220ENST00000576940 PLSCR1O15162 318 aa14.78□□□□□ -0.04
NPLOC4-220ENST00000576940 NBPF1Q3BBV0 1214 aa14.78□□□□□ -0.04
NPLOC4-220ENST00000576940 PROM2Q8N271 834 aa14.78□□□□□ -0.04
NPLOC4-220ENST00000576940 CABP2Q9NPB3 220 aa14.78□□□□□ -0.04
NPLOC4-220ENST00000576940 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
NPLOC4-220ENST00000576940 SRPK2P78362 688 aaKnown RBP14.77□□□□□ -0.05
NPLOC4-220ENST00000576940 DDB1Q16531 1140 aa14.77□□□□□ -0.05
NPLOC4-220ENST00000576940 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.05
NPLOC4-220ENST00000576940 LMO7Q8WWI1 1683 aa14.77□□□□□ -0.05
NPLOC4-220ENST00000576940 COL5A2P05997 1499 aaPredicted RBP14.76□□□□□ -0.05
NPLOC4-220ENST00000576940 C11orf95C9JLR9 678 aaPredicted RBP14.75□□□□□ -0.05
NPLOC4-220ENST00000576940 ZBTB7AO95365 584 aa14.75□□□□□ -0.05
NPLOC4-220ENST00000576940 NLRP6P59044 892 aa14.75□□□□□ -0.05
NPLOC4-220ENST00000576940 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
NPLOC4-220ENST00000576940 BCL11BQ9C0K0 894 aaPredicted RBP14.75□□□□□ -0.05
NPLOC4-220ENST00000576940 AXIN2Q9Y2T1 843 aa14.75□□□□□ -0.05
NPLOC4-220ENST00000576940 CRB1P82279 1406 aa14.75□□□□□ -0.05
NPLOC4-220ENST00000576940 NINLQ9Y2I6 1382 aa14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 MARCH10Q8NA82 808 aaPredicted RBP14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 CABP1Q9NZU7 370 aa14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 TOPAZ1Q8N9V7 1692 aa14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 OVOS2A0A0G2JMS6 1433 aa14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 PPIP5K1Q6PFW1 1433 aa14.74□□□□□ -0.05
NPLOC4-220ENST00000576940 PARP4Q9UKK3 1724 aaKnown RBP14.73□□□□□ -0.05
NPLOC4-220ENST00000576940 PTGER2P43116 358 aa14.72□□□□□ -0.05
NPLOC4-220ENST00000576940 PEAK1Q9H792 1746 aa14.72□□□□□ -0.05
NPLOC4-220ENST00000576940 AATKQ6ZMQ8 1374 aa14.71□□□□□ -0.06
NPLOC4-220ENST00000576940 SBF2Q86WG5 1849 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms