RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, human

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40B-210	ENST00000576148	NRAP	Q86VF7	1730 aa		11.32	□□□□□ -0.6
RAB40B-210	ENST00000576148	PLSCR1	O15162	318 aa		11.32	□□□□□ -0.6
RAB40B-210	ENST00000576148	KANK4	Q5T7N3	995 aa	Predicted RBP	11.32	□□□□□ -0.6
RAB40B-210	ENST00000576148	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.32	□□□□□ -0.6
RAB40B-210	ENST00000576148	C11orf95	C9JLR9	678 aa	Predicted RBP	11.31	□□□□□ -0.6
RAB40B-210	ENST00000576148	VGF	O15240	615 aa	Predicted RBP	11.31	□□□□□ -0.6
RAB40B-210	ENST00000576148	PHF8	Q9UPP1	1060 aa		11.31	□□□□□ -0.6
RAB40B-210	ENST00000576148	MAP3K5	Q99683	1374 aa		11.3	□□□□□ -0.6
RAB40B-210	ENST00000576148	SGIP1	Q9BQI5	828 aa		11.3	□□□□□ -0.6
RAB40B-210	ENST00000576148	STK32B	Q9NY57	414 aa		11.3	□□□□□ -0.6
RAB40B-210	ENST00000576148	CASZ1	Q86V15	1759 aa		11.3	□□□□□ -0.6
RAB40B-210	ENST00000576148		E9PCH4	1651 aa		11.3	□□□□□ -0.6
RAB40B-210	ENST00000576148	SHANK3	Q9BYB0	1731 aa		11.29	□□□□□ -0.6
RAB40B-210	ENST00000576148	APLP1	P51693	650 aa		11.29	□□□□□ -0.6
RAB40B-210	ENST00000576148	PRDM11	Q9NQV5	511 aa		11.29	□□□□□ -0.6
RAB40B-210	ENST00000576148	USP35	Q9P2H5	1018 aa		11.29	□□□□□ -0.6
RAB40B-210	ENST00000576148	KIF1A	Q12756	1690 aa		11.28	□□□□□ -0.6
RAB40B-210	ENST00000576148	BARGIN	Q6ZT62	677 aa		11.28	□□□□□ -0.6
RAB40B-210	ENST00000576148	WAPL	Q7Z5K2	1190 aa		11.28	□□□□□ -0.6
RAB40B-210	ENST00000576148	STRN4	Q9NRL3	753 aa		11.28	□□□□□ -0.6
RAB40B-210	ENST00000576148	COL14A1	Q05707	1796 aa	Known RBP	11.28	□□□□□ -0.6
RAB40B-210	ENST00000576148	ATP10D	Q9P241	1426 aa		11.27	□□□□□ -0.6
RAB40B-210	ENST00000576148	GRIN3B	O60391	1043 aa		11.27	□□□□□ -0.61
RAB40B-210	ENST00000576148	DNAJC5G	Q8N7S2	189 aa		11.27	□□□□□ -0.61
RAB40B-210	ENST00000576148	SLC15A2	Q16348	729 aa		11.26	□□□□□ -0.61
RAB40B-210	ENST00000576148	STK26	Q9P289	416 aa		11.26	□□□□□ -0.61
RAB40B-210	ENST00000576148	EVA1C	P58658	441 aa		11.25	□□□□□ -0.61
RAB40B-210	ENST00000576148	KLHL34	Q8N239	644 aa		11.25	□□□□□ -0.61
RAB40B-210	ENST00000576148	PROM2	Q8N271	834 aa		11.25	□□□□□ -0.61
RAB40B-210	ENST00000576148	ABCA3	Q99758	1704 aa		11.25	□□□□□ -0.61
RAB40B-210	ENST00000576148	NUP155	O75694	1391 aa		11.24	□□□□□ -0.61
RAB40B-210	ENST00000576148	TCP11L2	Q8N4U5	519 aa		11.23	□□□□□ -0.61
RAB40B-210	ENST00000576148	ZNF526	Q8TF50	670 aa	Predicted RBP	11.23	□□□□□ -0.61
RAB40B-210	ENST00000576148	TECPR2	O15040	1411 aa		11.23	□□□□□ -0.61
RAB40B-210	ENST00000576148	NRXN1	Q9ULB1	1477 aa		11.21	□□□□□ -0.61
RAB40B-210	ENST00000576148	CHRNA2	Q15822	529 aa		11.21	□□□□□ -0.61
RAB40B-210	ENST00000576148	PMFBP1	Q8TBY8	1022 aa		11.21	□□□□□ -0.61
RAB40B-210	ENST00000576148	TXNRD1	Q16881	649 aa		11.2	□□□□□ -0.62
RAB40B-210	ENST00000576148	THRAP3	Q9Y2W1	955 aa	Known RBP	11.2	□□□□□ -0.62
RAB40B-210	ENST00000576148	OVOS2	A0A0G2JMS6	1433 aa		11.19	□□□□□ -0.62
RAB40B-210	ENST00000576148	OVOS2	A0A0J9YW53	1432 aa		11.19	□□□□□ -0.62
RAB40B-210	ENST00000576148	OVOS2	Q6IE36	1432 aa		11.19	□□□□□ -0.62
RAB40B-210	ENST00000576148	KIAA0232	Q92628	1395 aa		11.19	□□□□□ -0.62
RAB40B-210	ENST00000576148	POLD1	P28340	1107 aa		11.19	□□□□□ -0.62
RAB40B-210	ENST00000576148	WWC3	Q9ULE0	1092 aa		11.19	□□□□□ -0.62
RAB40B-210	ENST00000576148	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	RGPD4	Q7Z3J3	1758 aa		11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	FMN2	Q9NZ56	1722 aa		11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	GPRASP1	Q5JY77	1395 aa		11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	PLEKHH1	Q9ULM0	1364 aa		11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	RPGRIP1L	Q68CZ1	1315 aa		11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	GOLGB1	Q14789	3259 aa	Known RBP	11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	YBX3	P16989	372 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	FAM50A	Q14320	339 aa	Known RBP	11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	LARP1	Q6PKG0	1096 aa	Known RBP	11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	PTF1A	Q7RTS3	328 aa		11.18	□□□□□ -0.62
RAB40B-210	ENST00000576148	DHX57	Q6P158	1386 aa	Known RBP	11.17	□□□□□ -0.62
RAB40B-210	ENST00000576148	AATK	Q6ZMQ8	1374 aa		11.17	□□□□□ -0.62
RAB40B-210	ENST00000576148	JMY	Q8N9B5	988 aa		11.17	□□□□□ -0.62
RAB40B-210	ENST00000576148	NLGN2	Q8NFZ4	835 aa		11.17	□□□□□ -0.62
RAB40B-210	ENST00000576148	SSH2	Q76I76	1423 aa		11.17	□□□□□ -0.62
RAB40B-210	ENST00000576148	ABCC11	Q96J66	1382 aa		11.16	□□□□□ -0.62
RAB40B-210	ENST00000576148	PAK3	O75914	559 aa	Predicted RBP	11.16	□□□□□ -0.62
RAB40B-210	ENST00000576148	ZC3H6	P61129	1189 aa	Known RBP	11.16	□□□□□ -0.62
RAB40B-210	ENST00000576148	KLRG1	Q96E93	195 aa		11.16	□□□□□ -0.62
RAB40B-210	ENST00000576148	KIF3C	O14782	793 aa		11.15	□□□□□ -0.62
RAB40B-210	ENST00000576148	VPS8	Q8N3P4	1428 aa		11.15	□□□□□ -0.62
RAB40B-210	ENST00000576148	SLC16A10	Q8TF71	515 aa		11.14	□□□□□ -0.63
RAB40B-210	ENST00000576148	TOMM70	O94826	608 aa		11.13	□□□□□ -0.63
RAB40B-210	ENST00000576148	DDB1	Q16531	1140 aa		11.13	□□□□□ -0.63
RAB40B-210	ENST00000576148	TMEM132E	Q6IEE7	984 aa		11.13	□□□□□ -0.63
RAB40B-210	ENST00000576148	SIRT1	Q96EB6	747 aa		11.13	□□□□□ -0.63
RAB40B-210	ENST00000576148	ADCY9	O60503	1353 aa		11.13	□□□□□ -0.63
RAB40B-210	ENST00000576148	ACIN1	Q9UKV3	1341 aa	Known RBP	11.12	□□□□□ -0.63
RAB40B-210	ENST00000576148	APLP2	Q06481	763 aa		11.12	□□□□□ -0.63
RAB40B-210	ENST00000576148	CLTCL1	P53675	1640 aa		11.12	□□□□□ -0.63
RAB40B-210	ENST00000576148	NGDN	Q8NEJ9	315 aa	Known RBP	11.1	□□□□□ -0.63
RAB40B-210	ENST00000576148	RGPD8	O14715	1765 aa	Predicted RBP	11.1	□□□□□ -0.63
RAB40B-210	ENST00000576148	ANKAR	Q7Z5J8	1434 aa		11.09	□□□□□ -0.63
RAB40B-210	ENST00000576148	ALS2	Q96Q42	1657 aa		11.09	□□□□□ -0.63
RAB40B-210	ENST00000576148	ATP7B	P35670	1465 aa		11.09	□□□□□ -0.63
RAB40B-210	ENST00000576148	PEAK1	Q9H792	1746 aa		11.09	□□□□□ -0.63
RAB40B-210	ENST00000576148	ADGRF5	Q8IZF2	1346 aa		11.09	□□□□□ -0.63
RAB40B-210	ENST00000576148	KIF1B	O60333	1816 aa		11.08	□□□□□ -0.64
RAB40B-210	ENST00000576148	HTRA3	P83110	453 aa		11.08	□□□□□ -0.64
RAB40B-210	ENST00000576148	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
RAB40B-210	ENST00000576148	MARCH10	Q8NA82	808 aa	Predicted RBP	11.08	□□□□□ -0.64
RAB40B-210	ENST00000576148	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.08	□□□□□ -0.64
RAB40B-210	ENST00000576148	PARP4	Q9UKK3	1724 aa	Known RBP	11.07	□□□□□ -0.64
RAB40B-210	ENST00000576148	ROCK1	Q13464	1354 aa		11.07	□□□□□ -0.64
RAB40B-210	ENST00000576148	BCL9	O00512	1426 aa		11.07	□□□□□ -0.64
RAB40B-210	ENST00000576148	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.07	□□□□□ -0.64
RAB40B-210	ENST00000576148	ZNF827	Q17R98	1081 aa		11.06	□□□□□ -0.64
RAB40B-210	ENST00000576148	NUTM2G	Q5VZR2	741 aa		11.06	□□□□□ -0.64
RAB40B-210	ENST00000576148	IFT172	Q9UG01	1749 aa		11.06	□□□□□ -0.64
RAB40B-210	ENST00000576148	ANKRD30B	Q9BXX2	1392 aa		11.05	□□□□□ -0.64
RAB40B-210	ENST00000576148	SBF2	Q86WG5	1849 aa		11.05	□□□□□ -0.64
RAB40B-210	ENST00000576148	PRAM1	Q96QH2	718 aa		11.05	□□□□□ -0.64
RAB40B-210	ENST00000576148	CRYBG1	Q9Y4K1	1723 aa		11.04	□□□□□ -0.64
RAB40B-210	ENST00000576148	CRB1	P82279	1406 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms