RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 FAM182BQ5T319 152 aa30.72■■■□□ 2.51
SPNS3-203ENST00000575185 TRAK1Q9UPV9 953 aa30.72■■■□□ 2.51
SPNS3-203ENST00000575185 BAG6P46379 1132 aa30.71■■■□□ 2.51
SPNS3-203ENST00000575185 ACIN1Q9UKV3 1341 aaKnown RBP30.71■■■□□ 2.51
SPNS3-203ENST00000575185 GPRASP1Q5JY77 1395 aa30.69■■■□□ 2.5
SPNS3-203ENST00000575185 PHRF1Q9P1Y6 1649 aaKnown RBP30.66■■■□□ 2.5
SPNS3-203ENST00000575185 HRCP23327 699 aa30.66■■■□□ 2.5
SPNS3-203ENST00000575185 EN1Q05925 392 aaPredicted RBP30.66■■■□□ 2.5
SPNS3-203ENST00000575185 SPATA31A5Q5VU36 1347 aa30.66■■■□□ 2.5
SPNS3-203ENST00000575185 SPATA31A7Q8IWB4 1347 aa30.66■■■□□ 2.5
SPNS3-203ENST00000575185 ITSN1Q15811 1721 aa30.65■■■□□ 2.5
SPNS3-203ENST00000575185 ARHGEF28Q8N1W1 1705 aaKnown RBP30.65■■■□□ 2.5
SPNS3-203ENST00000575185 EIF3AQ14152 1382 aaKnown RBP30.65■■■□□ 2.5
SPNS3-203ENST00000575185 WASLO00401 505 aaPredicted RBP30.62■■■□□ 2.49
SPNS3-203ENST00000575185 PAK3O75914 559 aaPredicted RBP30.61■■■□□ 2.49
SPNS3-203ENST00000575185 RAB3GAP2Q9H2M9 1393 aa30.61■■■□□ 2.49
SPNS3-203ENST00000575185 ATP7BP35670 1465 aa30.6■■■□□ 2.49
SPNS3-203ENST00000575185 NGDNQ8NEJ9 315 aaKnown RBP30.6■■■□□ 2.49
SPNS3-203ENST00000575185 KDM2AQ9Y2K7 1162 aa30.6■■■□□ 2.49
SPNS3-203ENST00000575185 PRDM11Q9NQV5 511 aa30.59■■■□□ 2.49
SPNS3-203ENST00000575185 DISP2A7MBM2 1401 aa30.58■■■□□ 2.49
SPNS3-203ENST00000575185 R3HDM1Q15032 1099 aaKnown RBP30.57■■■□□ 2.48
SPNS3-203ENST00000575185 KIAA0232Q92628 1395 aa30.56■■■□□ 2.48
SPNS3-203ENST00000575185 CHRNA2Q15822 529 aa30.55■■■□□ 2.48
SPNS3-203ENST00000575185 DCAF11Q8TEB1 546 aa30.55■■■□□ 2.48
SPNS3-203ENST00000575185 TOPAZ1Q8N9V7 1692 aa30.54■■■□□ 2.48
SPNS3-203ENST00000575185 SPATA31A1Q5TZJ5 1347 aa30.53■■■□□ 2.48
SPNS3-203ENST00000575185 EZH2Q15910 746 aaKnown RBP30.53■■■□□ 2.48
SPNS3-203ENST00000575185 STRN4Q9NRL3 753 aa30.5■■■□□ 2.47
SPNS3-203ENST00000575185 NRKQ7Z2Y5 1582 aa30.49■■■□□ 2.47
SPNS3-203ENST00000575185 RREB1Q92766 1687 aa30.49■■■□□ 2.47
SPNS3-203ENST00000575185 TRIM37O94972 964 aa30.48■■■□□ 2.47
SPNS3-203ENST00000575185 NUTM2GQ5VZR2 741 aa30.48■■■□□ 2.47
SPNS3-203ENST00000575185 NUDT16Q96DE0 195 aaKnown RBP30.48■■■□□ 2.47
SPNS3-203ENST00000575185 ZC3H6P61129 1189 aaKnown RBP30.47■■■□□ 2.47
SPNS3-203ENST00000575185 NUP188Q5SRE5 1749 aa30.46■■■□□ 2.47
SPNS3-203ENST00000575185 CAMKK2Q96RR4 588 aa30.45■■■□□ 2.47
SPNS3-203ENST00000575185 USP35Q9P2H5 1018 aa30.44■■■□□ 2.46
SPNS3-203ENST00000575185 LMO7Q8WWI1 1683 aa30.43■■■□□ 2.46
SPNS3-203ENST00000575185 SSH2Q76I76 1423 aa30.42■■■□□ 2.46
SPNS3-203ENST00000575185 CAMTA1Q9Y6Y1 1673 aa30.42■■■□□ 2.46
SPNS3-203ENST00000575185 FAM196AQ6ZSG2 479 aa30.41■■■□□ 2.46
SPNS3-203ENST00000575185 POLR3AO14802 1390 aaPredicted RBP30.41■■■□□ 2.46
SPNS3-203ENST00000575185 CDK19Q9BWU1 502 aa30.4■■■□□ 2.46
SPNS3-203ENST00000575185 APBA3O96018 575 aa30.39■■■□□ 2.46
SPNS3-203ENST00000575185 ACEP12821 1306 aa30.39■■■□□ 2.46
SPNS3-203ENST00000575185 NBPF8Q3BBV2 869 aa30.35■■■□□ 2.45
SPNS3-203ENST00000575185 LARP1Q6PKG0 1096 aaKnown RBP30.35■■■□□ 2.45
SPNS3-203ENST00000575185 PARD3Q8TEW0 1356 aa30.35■■■□□ 2.45
SPNS3-203ENST00000575185 KIAA1210Q9ULL0 1709 aa30.34■■■□□ 2.45
SPNS3-203ENST00000575185 EVA1CP58658 441 aa30.34■■■□□ 2.45
SPNS3-203ENST00000575185 BARGINQ6ZT62 677 aa30.34■■■□□ 2.45
SPNS3-203ENST00000575185 STAC3Q96MF2 364 aa30.34■■■□□ 2.45
SPNS3-203ENST00000575185 PARP4Q9UKK3 1724 aaKnown RBP30.33■■■□□ 2.45
SPNS3-203ENST00000575185 PDE3BQ13370 1112 aa30.32■■■□□ 2.44
SPNS3-203ENST00000575185 CPDO75976 1380 aa30.3■■■□□ 2.44
SPNS3-203ENST00000575185 USP19O94966 1318 aa30.3■■■□□ 2.44
SPNS3-203ENST00000575185 ABTB2Q8N961 1025 aa30.3■■■□□ 2.44
SPNS3-203ENST00000575185 CCDC61Q9Y6R9 512 aa30.3■■■□□ 2.44
SPNS3-203ENST00000575185 PLEKHG3A1L390 1219 aa30.28■■■□□ 2.44
SPNS3-203ENST00000575185 TCP11L2Q8N4U5 519 aa30.28■■■□□ 2.44
SPNS3-203ENST00000575185 COL5A2P05997 1499 aaPredicted RBP30.27■■■□□ 2.44
SPNS3-203ENST00000575185 PEAK1Q9H792 1746 aa30.26■■■□□ 2.43
SPNS3-203ENST00000575185 PPIP5K1Q6PFW1 1433 aa30.25■■■□□ 2.43
SPNS3-203ENST00000575185 LRRC37A3O60309 1634 aa30.25■■■□□ 2.43
SPNS3-203ENST00000575185 SBF2Q86WG5 1849 aa30.24■■■□□ 2.43
SPNS3-203ENST00000575185 QRICH2Q9H0J4 1663 aa30.23■■■□□ 2.43
SPNS3-203ENST00000575185 NBPF1Q3BBV0 1214 aa30.22■■■□□ 2.43
SPNS3-203ENST00000575185 GCP02774 474 aa30.21■■■□□ 2.43
SPNS3-203ENST00000575185 WNK3Q9BYP7 1800 aa30.21■■■□□ 2.43
SPNS3-203ENST00000575185 RGPD3A6NKT7 1758 aaPredicted RBP30.19■■■□□ 2.42
SPNS3-203ENST00000575185 RGPD4Q7Z3J3 1758 aa30.19■■■□□ 2.42
SPNS3-203ENST00000575185 NBPF14Q5TI25 921 aa30.19■■■□□ 2.42
SPNS3-203ENST00000575185 THRAP3Q9Y2W1 955 aaKnown RBP30.19■■■□□ 2.42
SPNS3-203ENST00000575185 SRPK2P78362 688 aaKnown RBP30.18■■■□□ 2.42
SPNS3-203ENST00000575185 NLRP13Q86W25 1043 aa30.18■■■□□ 2.42
SPNS3-203ENST00000575185 CRB1P82279 1406 aa30.18■■■□□ 2.42
SPNS3-203ENST00000575185 ZBTB7CA1YPR0 619 aa30.17■■■□□ 2.42
SPNS3-203ENST00000575185 CABP2Q9NPB3 220 aa30.17■■■□□ 2.42
SPNS3-203ENST00000575185 PIK3C2AO00443 1686 aa30.17■■■□□ 2.42
SPNS3-203ENST00000575185 SLIT3O75094 1523 aa30.17■■■□□ 2.42
SPNS3-203ENST00000575185 COL18A1P39060 1754 aa30.15■■■□□ 2.42
SPNS3-203ENST00000575185 OVOS2A0A0G2JMS6 1433 aa30.15■■■□□ 2.42
SPNS3-203ENST00000575185 OVOS2A0A0J9YW53 1432 aa30.15■■■□□ 2.42
SPNS3-203ENST00000575185 OVOS2Q6IE36 1432 aa30.15■■■□□ 2.42
SPNS3-203ENST00000575185 CENPJQ9HC77 1338 aaPredicted RBP30.13■■■□□ 2.41
SPNS3-203ENST00000575185 USP6P35125 1406 aa30.13■■■□□ 2.41
SPNS3-203ENST00000575185 AKAP12Q02952 1782 aa30.12■■■□□ 2.41
SPNS3-203ENST00000575185 CASZ1Q86V15 1759 aa30.12■■■□□ 2.41
SPNS3-203ENST00000575185 RGPD5Q99666 1765 aa30.11■■■□□ 2.41
SPNS3-203ENST00000575185 YY1P25490 414 aa30.11■■■□□ 2.41
SPNS3-203ENST00000575185 SPON1Q9HCB6 807 aa30.1■■■□□ 2.41
SPNS3-203ENST00000575185 PTF1AQ7RTS3 328 aa30.09■■■□□ 2.41
SPNS3-203ENST00000575185 PPP1R1BQ9UD71 204 aaPredicted RBP30.09■■■□□ 2.41
SPNS3-203ENST00000575185 AATKQ6ZMQ8 1374 aa30.08■■■□□ 2.41
SPNS3-203ENST00000575185 KCNQ2O43526 872 aa30.08■■■□□ 2.41
SPNS3-203ENST00000575185 ANO8Q9HCE9 1232 aaPredicted RBP30.08■■■□□ 2.41
SPNS3-203ENST00000575185 BRD4O60885 1362 aaPredicted RBP30.07■■■□□ 2.4
SPNS3-203ENST00000575185 NLRP6P59044 892 aa30.07■■■□□ 2.4
SPNS3-203ENST00000575185 CABP1Q9NZU7 370 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms