RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 FBLN1P23142 703 aa18.6■□□□□ 0.57
ERCC4-207ENST00000575156 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
ERCC4-207ENST00000575156 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
ERCC4-207ENST00000575156 NCOA3Q9Y6Q9 1424 aa18.59■□□□□ 0.57
ERCC4-207ENST00000575156 ATF3P18847 181 aa18.58■□□□□ 0.57
ERCC4-207ENST00000575156 MTHFSP49914 203 aa18.58■□□□□ 0.57
ERCC4-207ENST00000575156 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.56
ERCC4-207ENST00000575156 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.56
ERCC4-207ENST00000575156 ANKRD26Q9UPS8 1709 aa18.58■□□□□ 0.56
ERCC4-207ENST00000575156 HNRNPUQ00839 825 aaKnown RBP eCLIP18.58■□□□□ 0.56
ERCC4-207ENST00000575156 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
ERCC4-207ENST00000575156 MST1RQ04912 1400 aa18.56■□□□□ 0.56
ERCC4-207ENST00000575156 MSH6P52701 1360 aa18.56■□□□□ 0.56
ERCC4-207ENST00000575156 DCCP43146 1447 aa18.55■□□□□ 0.56
ERCC4-207ENST00000575156 FOXO3O43524 673 aa18.54■□□□□ 0.56
ERCC4-207ENST00000575156 COG3Q96JB2 828 aa18.54■□□□□ 0.56
ERCC4-207ENST00000575156 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
ERCC4-207ENST00000575156 XPCQ01831 940 aaPredicted RBP18.53■□□□□ 0.56
ERCC4-207ENST00000575156 CADPS2Q86UW7 1296 aa18.53■□□□□ 0.56
ERCC4-207ENST00000575156 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
ERCC4-207ENST00000575156 TTC21AQ8NDW8 1320 aa18.52■□□□□ 0.56
ERCC4-207ENST00000575156 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.56
ERCC4-207ENST00000575156 OVOS2A0A0J9YW53 1432 aa18.52■□□□□ 0.55
ERCC4-207ENST00000575156 OVOS2Q6IE36 1432 aa18.52■□□□□ 0.55
ERCC4-207ENST00000575156 PSME1Q06323 249 aa18.51■□□□□ 0.55
ERCC4-207ENST00000575156 NUTM2GQ5VZR2 741 aa18.51■□□□□ 0.55
ERCC4-207ENST00000575156 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
ERCC4-207ENST00000575156 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
ERCC4-207ENST00000575156 PIK3C2AO00443 1686 aa18.49■□□□□ 0.55
ERCC4-207ENST00000575156 SOX12O15370 315 aa18.49■□□□□ 0.55
ERCC4-207ENST00000575156 RRS1Q15050 365 aaKnown RBP18.49■□□□□ 0.55
ERCC4-207ENST00000575156 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
ERCC4-207ENST00000575156 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
ERCC4-207ENST00000575156 EMILIN1Q9Y6C2 1016 aa18.49■□□□□ 0.55
ERCC4-207ENST00000575156 PPM1GO15355 546 aaPredicted RBP18.48■□□□□ 0.55
ERCC4-207ENST00000575156 NLRP6P59044 892 aa18.48■□□□□ 0.55
ERCC4-207ENST00000575156 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
ERCC4-207ENST00000575156 USP31Q70CQ4 1352 aa18.47■□□□□ 0.55
ERCC4-207ENST00000575156 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
ERCC4-207ENST00000575156 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
ERCC4-207ENST00000575156 KRT28Q7Z3Y7 464 aa18.46■□□□□ 0.55
ERCC4-207ENST00000575156 COL3A1P02461 1466 aaPredicted RBP18.45■□□□□ 0.54
ERCC4-207ENST00000575156 SHPRHQ149N8 1683 aa18.45■□□□□ 0.54
ERCC4-207ENST00000575156 SLAIN2Q9P270 581 aa18.45■□□□□ 0.54
ERCC4-207ENST00000575156 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
ERCC4-207ENST00000575156 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
ERCC4-207ENST00000575156 BRINP3Q76B58 766 aa18.44■□□□□ 0.54
ERCC4-207ENST00000575156 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
ERCC4-207ENST00000575156 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
ERCC4-207ENST00000575156 LTBP4Q8N2S1 1624 aa18.43■□□□□ 0.54
ERCC4-207ENST00000575156 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
ERCC4-207ENST00000575156 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
ERCC4-207ENST00000575156 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
ERCC4-207ENST00000575156 MARF1Q9Y4F3 1742 aaKnown RBP18.42■□□□□ 0.54
ERCC4-207ENST00000575156 SMG6Q86US8 1419 aaKnown RBP18.42■□□□□ 0.54
ERCC4-207ENST00000575156 ZBED9Q6R2W3 1325 aa18.41■□□□□ 0.54
ERCC4-207ENST00000575156 PLEKHG5O94827 1062 aa18.41■□□□□ 0.54
ERCC4-207ENST00000575156 INSRP06213 1382 aa18.4■□□□□ 0.54
ERCC4-207ENST00000575156 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
ERCC4-207ENST00000575156 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
ERCC4-207ENST00000575156 MAP3K19Q56UN5 1328 aa18.39■□□□□ 0.54
ERCC4-207ENST00000575156 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
ERCC4-207ENST00000575156 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
ERCC4-207ENST00000575156 NPHP3Q7Z494 1330 aa18.39■□□□□ 0.53
ERCC4-207ENST00000575156 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
ERCC4-207ENST00000575156 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
ERCC4-207ENST00000575156 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
ERCC4-207ENST00000575156 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
ERCC4-207ENST00000575156 USP54Q70EL1 1684 aa18.37■□□□□ 0.53
ERCC4-207ENST00000575156 PXDNQ92626 1479 aa18.37■□□□□ 0.53
ERCC4-207ENST00000575156 HSP90AB2PQ58FF8 381 aa18.36■□□□□ 0.53
ERCC4-207ENST00000575156 IL13P35225 146 aa18.35■□□□□ 0.53
ERCC4-207ENST00000575156 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
ERCC4-207ENST00000575156 APAF1O14727 1248 aa18.34■□□□□ 0.53
ERCC4-207ENST00000575156 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
ERCC4-207ENST00000575156 ALS2Q96Q42 1657 aa18.33■□□□□ 0.52
ERCC4-207ENST00000575156 NFAT5O94916 1531 aa18.32■□□□□ 0.52
ERCC4-207ENST00000575156 AMPHP49418 695 aa18.32■□□□□ 0.52
ERCC4-207ENST00000575156 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
ERCC4-207ENST00000575156 USP19O94966 1318 aa18.32■□□□□ 0.52
ERCC4-207ENST00000575156 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
ERCC4-207ENST00000575156 GCP02774 474 aa18.32■□□□□ 0.52
ERCC4-207ENST00000575156 TNS3Q68CZ2 1445 aa18.31■□□□□ 0.52
ERCC4-207ENST00000575156 FLT4P35916 1363 aa18.31■□□□□ 0.52
ERCC4-207ENST00000575156 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
ERCC4-207ENST00000575156 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
ERCC4-207ENST00000575156 HMOX1P09601 288 aa18.3■□□□□ 0.52
ERCC4-207ENST00000575156 HOXC9P31274 260 aa18.3■□□□□ 0.52
ERCC4-207ENST00000575156 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
ERCC4-207ENST00000575156 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
ERCC4-207ENST00000575156 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
ERCC4-207ENST00000575156 SLIT3O75094 1523 aa18.29■□□□□ 0.52
ERCC4-207ENST00000575156 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
ERCC4-207ENST00000575156 KCNH5Q8NCM2 988 aa18.29■□□□□ 0.52
ERCC4-207ENST00000575156 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
ERCC4-207ENST00000575156 TCP11L2Q8N4U5 519 aa18.28■□□□□ 0.52
ERCC4-207ENST00000575156 RSPH6AQ9H0K4 717 aa18.27■□□□□ 0.52
ERCC4-207ENST00000575156 NEUROD2Q15784 382 aa18.27■□□□□ 0.51
ERCC4-207ENST00000575156 IQSEC2Q5JU85 1478 aa18.27■□□□□ 0.51
ERCC4-207ENST00000575156 ARHGEF25Q86VW2 580 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms