RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 SPRYD7Q5W111 196 aa8.33□□□□□ -1.08
TSR1-203ENST00000575049 CCDC9Q9Y3X0 531 aaKnown RBP8.33□□□□□ -1.08
TSR1-203ENST00000575049 NR6A1Q15406 480 aa8.32□□□□□ -1.08
TSR1-203ENST00000575049 SNRKQ9NRH2 765 aa8.32□□□□□ -1.08
TSR1-203ENST00000575049 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
TSR1-203ENST00000575049 MTMR14Q8NCE2 650 aa8.31□□□□□ -1.08
TSR1-203ENST00000575049 SOCS7O14512 581 aa8.3□□□□□ -1.08
TSR1-203ENST00000575049 EPS8L1Q8TE68 723 aa8.3□□□□□ -1.08
TSR1-203ENST00000575049 ZBTB7CA1YPR0 619 aa8.29□□□□□ -1.08
TSR1-203ENST00000575049 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
TSR1-203ENST00000575049 ZNF697Q5TEC3 545 aa8.29□□□□□ -1.08
TSR1-203ENST00000575049 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
TSR1-203ENST00000575049 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
TSR1-203ENST00000575049 TRIM34Q9BYJ4 488 aa8.29□□□□□ -1.08
TSR1-203ENST00000575049 MCM6Q14566 821 aa8.28□□□□□ -1.08
TSR1-203ENST00000575049 ARMC2Q8NEN0 867 aa8.28□□□□□ -1.08
TSR1-203ENST00000575049 BAP1Q92560 729 aa8.28□□□□□ -1.08
TSR1-203ENST00000575049 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
TSR1-203ENST00000575049 WNT7BP56706 349 aa8.27□□□□□ -1.09
TSR1-203ENST00000575049 SH3BP2P78314 561 aa8.27□□□□□ -1.09
TSR1-203ENST00000575049 SKOR1P84550 965 aa8.27□□□□□ -1.09
TSR1-203ENST00000575049 ZNF511Q8NB15 262 aa8.27□□□□□ -1.09
TSR1-203ENST00000575049 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
TSR1-203ENST00000575049 APBB1O00213 710 aa8.26□□□□□ -1.09
TSR1-203ENST00000575049 NBPF14Q5TI25 921 aa8.26□□□□□ -1.09
TSR1-203ENST00000575049 FLIIQ13045 1269 aa8.25□□□□□ -1.09
TSR1-203ENST00000575049 PNMA1Q8ND90 353 aa8.25□□□□□ -1.09
TSR1-203ENST00000575049 GPKOWQ92917 476 aaPredicted RBP eCLIP8.25□□□□□ -1.09
TSR1-203ENST00000575049 ZC3H4Q9UPT8 1303 aaKnown RBP8.25□□□□□ -1.09
TSR1-203ENST00000575049 NDUFB9Q9Y6M9 179 aa8.24□□□□□ -1.09
TSR1-203ENST00000575049 WNT7AO00755 349 aa8.23□□□□□ -1.09
TSR1-203ENST00000575049 FOXC1Q12948 553 aa8.23□□□□□ -1.09
TSR1-203ENST00000575049 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
TSR1-203ENST00000575049 TRIM67Q6ZTA4 783 aa8.23□□□□□ -1.09
TSR1-203ENST00000575049 FOXJ1Q92949 421 aa8.23□□□□□ -1.09
TSR1-203ENST00000575049 PKD2L1Q9P0L9 805 aa8.23□□□□□ -1.09
TSR1-203ENST00000575049 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
TSR1-203ENST00000575049 GDF9O60383 454 aa8.22□□□□□ -1.09
TSR1-203ENST00000575049 PDXDC2PQ6P474 469 aa8.22□□□□□ -1.09
TSR1-203ENST00000575049 TNFRSF10AO00220 468 aa8.21□□□□□ -1.1
TSR1-203ENST00000575049 GPR37L1O60883 481 aa8.21□□□□□ -1.1
TSR1-203ENST00000575049 AGERQ15109 404 aa8.21□□□□□ -1.1
TSR1-203ENST00000575049 SH3BP5LQ7L8J4 393 aa8.21□□□□□ -1.1
TSR1-203ENST00000575049 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.1
TSR1-203ENST00000575049 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
TSR1-203ENST00000575049 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
TSR1-203ENST00000575049 TBC1D2BQ9UPU7 963 aa8.21□□□□□ -1.1
TSR1-203ENST00000575049 PRR20EP86478 221 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 PRR20CP86479 221 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 PRR20DP86480 221 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 PRR20BP86481 221 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 PRR20AP86496 221 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 SH3RF1Q7Z6J0 888 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 MRGPRX2Q96LB1 330 aa8.2□□□□□ -1.1
TSR1-203ENST00000575049 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
TSR1-203ENST00000575049 ARHGAP9Q9BRR9 750 aa8.19□□□□□ -1.1
TSR1-203ENST00000575049 PDZRN3Q9UPQ7 1066 aa8.19□□□□□ -1.1
TSR1-203ENST00000575049 GPSM3Q9Y4H4 160 aa8.19□□□□□ -1.1
TSR1-203ENST00000575049 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
TSR1-203ENST00000575049 PTK2Q05397 1052 aa8.18□□□□□ -1.1
TSR1-203ENST00000575049 OCSTAMPQ9BR26 566 aa8.18□□□□□ -1.1
TSR1-203ENST00000575049 GDPD2Q9HCC8 539 aa8.18□□□□□ -1.1
TSR1-203ENST00000575049 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
TSR1-203ENST00000575049 SIAH2O43255 324 aa8.17□□□□□ -1.1
TSR1-203ENST00000575049 FAM174AQ8TBP5 190 aa8.17□□□□□ -1.1
TSR1-203ENST00000575049 C1QTNF2Q9BXJ5 285 aa8.17□□□□□ -1.1
TSR1-203ENST00000575049 CARD14Q9BXL6 1004 aa8.17□□□□□ -1.1
TSR1-203ENST00000575049 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
TSR1-203ENST00000575049 GFRA3O60609 400 aa8.16□□□□□ -1.1
TSR1-203ENST00000575049 ZBTB33Q86T24 672 aa8.16□□□□□ -1.1
TSR1-203ENST00000575049 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
TSR1-203ENST00000575049 POM121Q96HA1 1249 aa8.16□□□□□ -1.1
TSR1-203ENST00000575049 IRX2Q9BZI1 471 aaPredicted RBP8.16□□□□□ -1.1
TSR1-203ENST00000575049 ZBBXA8MT70 800 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 FBXO45P0C2W1 286 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 ABL2P42684 1182 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 IRF5Q13568 498 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 ERFEQ4G0M1 354 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
TSR1-203ENST00000575049 ADAM32Q8TC27 787 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 TOR4AQ9NXH8 423 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 TLL2Q9Y6L7 1015 aa8.15□□□□□ -1.1
TSR1-203ENST00000575049 TTC24A2A3L6 582 aaPredicted RBP8.14□□□□□ -1.11
TSR1-203ENST00000575049 RAD21O60216 631 aa8.14□□□□□ -1.11
TSR1-203ENST00000575049 NR1H3Q13133 447 aa8.14□□□□□ -1.11
TSR1-203ENST00000575049 NRG2O14511 850 aaPredicted RBP8.13□□□□□ -1.11
TSR1-203ENST00000575049 LAPTM4AQ15012 233 aa8.13□□□□□ -1.11
TSR1-203ENST00000575049 TRMT44Q8IYL2 757 aaKnown RBP8.13□□□□□ -1.11
TSR1-203ENST00000575049 MPNDQ8N594 471 aa8.13□□□□□ -1.11
TSR1-203ENST00000575049 ALDH1A1P00352 501 aa8.12□□□□□ -1.11
TSR1-203ENST00000575049 CLUAP1Q96AJ1 413 aa8.12□□□□□ -1.11
TSR1-203ENST00000575049 J3QL48 77 aa8.11□□□□□ -1.11
TSR1-203ENST00000575049 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
TSR1-203ENST00000575049 CDK15Q96Q40 435 aa8.11□□□□□ -1.11
TSR1-203ENST00000575049 SMPD1P17405 629 aa8.1□□□□□ -1.11
TSR1-203ENST00000575049 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
TSR1-203ENST00000575049 MAP4K5Q9Y4K4 846 aa8.1□□□□□ -1.11
TSR1-203ENST00000575049 FAM187AA6NFU0 413 aa8.09□□□□□ -1.11
TSR1-203ENST00000575049 VAC14Q08AM6 782 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms