RNA–Protein interactions for RNA: ENST00000574653.1

TOM1L1-218, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-218ENST00000574653 PRDM9Q9NQV7 894 aa9.39□□□□□ -0.91
TOM1L1-218ENST00000574653 MAP10Q9P2G4 905 aa9.39□□□□□ -0.91
TOM1L1-218ENST00000574653 TLL1O43897 1013 aa9.38□□□□□ -0.91
TOM1L1-218ENST00000574653 ZPR1O75312 459 aa9.38□□□□□ -0.91
TOM1L1-218ENST00000574653 Q6ZNB5 142 aa9.38□□□□□ -0.91
TOM1L1-218ENST00000574653 MTRQ99707 1265 aa9.38□□□□□ -0.91
TOM1L1-218ENST00000574653 ADH1BP00325 375 aa9.37□□□□□ -0.91
TOM1L1-218ENST00000574653 TJAP1Q5JTD0 557 aa9.37□□□□□ -0.91
TOM1L1-218ENST00000574653 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
TOM1L1-218ENST00000574653 ZC3H4Q9UPT8 1303 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-218ENST00000574653 CCNYL3P0C7X3 344 aa9.36□□□□□ -0.91
TOM1L1-218ENST00000574653 PNMA1Q8ND90 353 aa9.36□□□□□ -0.91
TOM1L1-218ENST00000574653 EVA1BQ9NVM1 165 aa9.36□□□□□ -0.91
TOM1L1-218ENST00000574653 SOX11P35716 441 aa9.35□□□□□ -0.91
TOM1L1-218ENST00000574653 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
TOM1L1-218ENST00000574653 NR1H3Q13133 447 aa9.34□□□□□ -0.91
TOM1L1-218ENST00000574653 NUDT12Q9BQG2 462 aa9.34□□□□□ -0.91
TOM1L1-218ENST00000574653 KCNH2Q12809 1159 aa9.33□□□□□ -0.92
TOM1L1-218ENST00000574653 ZNF516Q92618 1163 aa9.33□□□□□ -0.92
TOM1L1-218ENST00000574653 UCN2Q96RP3 112 aa9.33□□□□□ -0.92
TOM1L1-218ENST00000574653 IL21Q9HBE4 155 aa9.33□□□□□ -0.92
TOM1L1-218ENST00000574653 ZBBXA8MT70 800 aa9.32□□□□□ -0.92
TOM1L1-218ENST00000574653 KCNC4Q03721 635 aa9.32□□□□□ -0.92
TOM1L1-218ENST00000574653 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
TOM1L1-218ENST00000574653 CTHP32929 405 aa9.31□□□□□ -0.92
TOM1L1-218ENST00000574653 PPP1R12CQ9BZL4 782 aa9.31□□□□□ -0.92
TOM1L1-218ENST00000574653 LAPTM4AQ15012 233 aa9.3□□□□□ -0.92
TOM1L1-218ENST00000574653 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
TOM1L1-218ENST00000574653 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
TOM1L1-218ENST00000574653 LCE2BO14633 110 aa9.29□□□□□ -0.92
TOM1L1-218ENST00000574653 PPP1R15AO75807 674 aaPredicted RBP9.29□□□□□ -0.92
TOM1L1-218ENST00000574653 EIF4G2P78344 907 aaKnown RBP eCLIP9.29□□□□□ -0.92
TOM1L1-218ENST00000574653 SRPK2P78362 688 aaKnown RBP9.29□□□□□ -0.92
TOM1L1-218ENST00000574653 SEMA3FQ13275 785 aa9.29□□□□□ -0.92
TOM1L1-218ENST00000574653 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
TOM1L1-218ENST00000574653 SLC6A16Q9GZN6 736 aa9.29□□□□□ -0.92
TOM1L1-218ENST00000574653 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
TOM1L1-218ENST00000574653 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
TOM1L1-218ENST00000574653 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
TOM1L1-218ENST00000574653 GPSM3Q9Y4H4 160 aa9.28□□□□□ -0.92
TOM1L1-218ENST00000574653 NKX2-3Q8TAU0 364 aa9.27□□□□□ -0.93
TOM1L1-218ENST00000574653 PBXIP1Q96AQ6 731 aa9.26□□□□□ -0.93
TOM1L1-218ENST00000574653 UNC93B1Q9H1C4 597 aa9.26□□□□□ -0.93
TOM1L1-218ENST00000574653 NBPF14Q5TI25 921 aa9.25□□□□□ -0.93
TOM1L1-218ENST00000574653 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
TOM1L1-218ENST00000574653 S1PR4O95977 384 aa9.24□□□□□ -0.93
TOM1L1-218ENST00000574653 PTK2Q05397 1052 aa9.24□□□□□ -0.93
TOM1L1-218ENST00000574653 TRAF7Q6Q0C0 670 aa9.24□□□□□ -0.93
TOM1L1-218ENST00000574653 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
TOM1L1-218ENST00000574653 SH3BP5LQ7L8J4 393 aa9.24□□□□□ -0.93
TOM1L1-218ENST00000574653 RETREG2Q8NC44 543 aa9.24□□□□□ -0.93
TOM1L1-218ENST00000574653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.23□□□□□ -0.93
TOM1L1-218ENST00000574653 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
TOM1L1-218ENST00000574653 TRAIPQ9BWF2 469 aa9.23□□□□□ -0.93
TOM1L1-218ENST00000574653 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
TOM1L1-218ENST00000574653 PIK3CDO00329 1044 aa9.22□□□□□ -0.93
TOM1L1-218ENST00000574653 ATP9BO43861 1147 aa9.22□□□□□ -0.93
TOM1L1-218ENST00000574653 PDIA4P13667 645 aaKnown RBP9.22□□□□□ -0.93
TOM1L1-218ENST00000574653 RFX1P22670 979 aa9.22□□□□□ -0.93
TOM1L1-218ENST00000574653 LMOD1P29536 600 aaPredicted RBP9.22□□□□□ -0.93
TOM1L1-218ENST00000574653 GFRA3O60609 400 aa9.21□□□□□ -0.94
TOM1L1-218ENST00000574653 SH3RF1Q7Z6J0 888 aa9.21□□□□□ -0.94
TOM1L1-218ENST00000574653 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
TOM1L1-218ENST00000574653 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.94
TOM1L1-218ENST00000574653 ADAM32Q8TC27 787 aa9.2□□□□□ -0.94
TOM1L1-218ENST00000574653 ARHGAP9Q9BRR9 750 aa9.2□□□□□ -0.94
TOM1L1-218ENST00000574653 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
TOM1L1-218ENST00000574653 FAM174AQ8TBP5 190 aa9.19□□□□□ -0.94
TOM1L1-218ENST00000574653 CEP126Q9P2H0 1117 aa9.19□□□□□ -0.94
TOM1L1-218ENST00000574653 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
TOM1L1-218ENST00000574653 PHTF2Q8N3S3 785 aa9.18□□□□□ -0.94
TOM1L1-218ENST00000574653 BAP1Q92560 729 aa9.18□□□□□ -0.94
TOM1L1-218ENST00000574653 ZNF592Q92610 1267 aa9.18□□□□□ -0.94
TOM1L1-218ENST00000574653 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
TOM1L1-218ENST00000574653 ZNF511Q8NB15 262 aa9.17□□□□□ -0.94
TOM1L1-218ENST00000574653 PCDHB9Q9Y5E1 797 aa9.17□□□□□ -0.94
TOM1L1-218ENST00000574653 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
TOM1L1-218ENST00000574653 KANK4Q5T7N3 995 aaPredicted RBP9.16□□□□□ -0.94
TOM1L1-218ENST00000574653 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
TOM1L1-218ENST00000574653 FOXJ1Q92949 421 aa9.16□□□□□ -0.94
TOM1L1-218ENST00000574653 CHIC2Q9UKJ5 165 aa9.16□□□□□ -0.94
TOM1L1-218ENST00000574653 NRG2O14511 850 aaPredicted RBP9.15□□□□□ -0.94
TOM1L1-218ENST00000574653 PPEF1O14829 653 aaPredicted RBP9.15□□□□□ -0.94
TOM1L1-218ENST00000574653 ATG7O95352 703 aa9.15□□□□□ -0.94
TOM1L1-218ENST00000574653 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
TOM1L1-218ENST00000574653 ZBTB33Q86T24 672 aa9.15□□□□□ -0.94
TOM1L1-218ENST00000574653 C1QTNF2Q9BXJ5 285 aa9.15□□□□□ -0.94
TOM1L1-218ENST00000574653 USP17L3A6NCW0 530 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 USP17L4A6NCW7 530 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 USP17L5A8MUK1 530 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 SKIP12755 728 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 ERFEQ4G0M1 354 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 USP17L2Q6R6M4 530 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 USP17L1Q7RTZ2 530 aa9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 BPHLQ86WA6 291 aaPredicted RBP9.14□□□□□ -0.95
TOM1L1-218ENST00000574653 SH3BP2P78314 561 aa9.13□□□□□ -0.95
TOM1L1-218ENST00000574653 PLA2G2CQ5R387 149 aa9.13□□□□□ -0.95
TOM1L1-218ENST00000574653 CARD14Q9BXL6 1004 aa9.13□□□□□ -0.95
TOM1L1-218ENST00000574653 PRKD2Q9BZL6 878 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms