RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 GDF9O60383 454 aa10.5□□□□□ -0.73
CDC27-216ENST00000574304 PKD2L1Q9P0L9 805 aa10.5□□□□□ -0.73
CDC27-216ENST00000574304 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
CDC27-216ENST00000574304 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
CDC27-216ENST00000574304 WNT7AO00755 349 aa10.49□□□□□ -0.73
CDC27-216ENST00000574304 GFRA3O60609 400 aa10.49□□□□□ -0.73
CDC27-216ENST00000574304 RC3H1Q5TC82 1133 aaKnown RBP10.49□□□□□ -0.73
CDC27-216ENST00000574304 PRR20EP86478 221 aa10.48□□□□□ -0.73
CDC27-216ENST00000574304 PRR20CP86479 221 aa10.48□□□□□ -0.73
CDC27-216ENST00000574304 PRR20DP86480 221 aa10.48□□□□□ -0.73
CDC27-216ENST00000574304 PRR20BP86481 221 aa10.48□□□□□ -0.73
CDC27-216ENST00000574304 PRR20AP86496 221 aa10.48□□□□□ -0.73
CDC27-216ENST00000574304 EPS8L1Q8TE68 723 aa10.48□□□□□ -0.73
CDC27-216ENST00000574304 NBPF14Q5TI25 921 aa10.47□□□□□ -0.73
CDC27-216ENST00000574304 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
CDC27-216ENST00000574304 FKBPLQ9UIM3 349 aa10.47□□□□□ -0.73
CDC27-216ENST00000574304 MTMR14Q8NCE2 650 aa10.46□□□□□ -0.73
CDC27-216ENST00000574304 MRGPRX2Q96LB1 330 aa10.46□□□□□ -0.73
CDC27-216ENST00000574304 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
CDC27-216ENST00000574304 LAPTM4AQ15012 233 aa10.45□□□□□ -0.74
CDC27-216ENST00000574304 EHBP1Q8NDI1 1231 aa10.45□□□□□ -0.74
CDC27-216ENST00000574304 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
CDC27-216ENST00000574304 FOXJ1Q92949 421 aa10.45□□□□□ -0.74
CDC27-216ENST00000574304 GJD4Q96KN9 370 aaPredicted RBP10.45□□□□□ -0.74
CDC27-216ENST00000574304 NRG2O14511 850 aaPredicted RBP10.44□□□□□ -0.74
CDC27-216ENST00000574304 SOCS7O14512 581 aa10.44□□□□□ -0.74
CDC27-216ENST00000574304 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
CDC27-216ENST00000574304 ZC3H4Q9UPT8 1303 aaKnown RBP10.43□□□□□ -0.74
CDC27-216ENST00000574304 AGERQ15109 404 aa10.43□□□□□ -0.74
CDC27-216ENST00000574304 CYP4X1Q8N118 509 aa10.43□□□□□ -0.74
CDC27-216ENST00000574304 APBB1O00213 710 aa10.42□□□□□ -0.74
CDC27-216ENST00000574304 BPHLQ86WA6 291 aaPredicted RBP10.42□□□□□ -0.74
CDC27-216ENST00000574304 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
CDC27-216ENST00000574304 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
CDC27-216ENST00000574304 SH3BP5LQ7L8J4 393 aa10.41□□□□□ -0.74
CDC27-216ENST00000574304 TOR4AQ9NXH8 423 aa10.41□□□□□ -0.74
CDC27-216ENST00000574304 TTC24A2A3L6 582 aaPredicted RBP10.4□□□□□ -0.74
CDC27-216ENST00000574304 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
CDC27-216ENST00000574304 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
CDC27-216ENST00000574304 SIAH2O43255 324 aa10.39□□□□□ -0.75
CDC27-216ENST00000574304 SH3RF1Q7Z6J0 888 aa10.39□□□□□ -0.75
CDC27-216ENST00000574304 FAM174AQ8TBP5 190 aa10.39□□□□□ -0.75
CDC27-216ENST00000574304 MAGEB6P1A0A0J9YX57 407 aa10.38□□□□□ -0.75
CDC27-216ENST00000574304 MCM6Q14566 821 aa10.38□□□□□ -0.75
CDC27-216ENST00000574304 NDUFB9Q9Y6M9 179 aa10.38□□□□□ -0.75
CDC27-216ENST00000574304 PTK2Q05397 1052 aa10.37□□□□□ -0.75
CDC27-216ENST00000574304 ARHGAP9Q9BRR9 750 aa10.37□□□□□ -0.75
CDC27-216ENST00000574304 GPSM3Q9Y4H4 160 aa10.37□□□□□ -0.75
CDC27-216ENST00000574304 FAM187AA6NFU0 413 aa10.36□□□□□ -0.75
CDC27-216ENST00000574304 CARD14Q9BXL6 1004 aa10.36□□□□□ -0.75
CDC27-216ENST00000574304 TLL2Q9Y6L7 1015 aa10.36□□□□□ -0.75
CDC27-216ENST00000574304 ALDH1A1P00352 501 aa10.35□□□□□ -0.75
CDC27-216ENST00000574304 C1QTNF2Q9BXJ5 285 aa10.35□□□□□ -0.75
CDC27-216ENST00000574304 J3QL48 77 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 DGAT1O75907 488 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 PKDCCQ504Y2 493 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 Q6ZNB5 142 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 ZBTB33Q86T24 672 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 MPNDQ8N594 471 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 OCSTAMPQ9BR26 566 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 TBC1D2BQ9UPU7 963 aa10.34□□□□□ -0.75
CDC27-216ENST00000574304 GPR37L1O60883 481 aa10.33□□□□□ -0.76
CDC27-216ENST00000574304 SMPD1P17405 629 aa10.33□□□□□ -0.76
CDC27-216ENST00000574304 FLIIQ13045 1269 aa10.33□□□□□ -0.76
CDC27-216ENST00000574304 ERFEQ4G0M1 354 aa10.33□□□□□ -0.76
CDC27-216ENST00000574304 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
CDC27-216ENST00000574304 TRMT44Q8IYL2 757 aaKnown RBP10.32□□□□□ -0.76
CDC27-216ENST00000574304 ADAM32Q8TC27 787 aa10.32□□□□□ -0.76
CDC27-216ENST00000574304 ZBBXA8MT70 800 aa10.31□□□□□ -0.76
CDC27-216ENST00000574304 CDK15Q96Q40 435 aa10.31□□□□□ -0.76
CDC27-216ENST00000574304 WASF2Q9Y6W5 498 aa10.31□□□□□ -0.76
CDC27-216ENST00000574304 GDPD2Q9HCC8 539 aa10.3□□□□□ -0.76
CDC27-216ENST00000574304 FBXO45P0C2W1 286 aa10.29□□□□□ -0.76
CDC27-216ENST00000574304 SLC10A4Q96EP9 437 aa10.29□□□□□ -0.76
CDC27-216ENST00000574304 ADH1CP00326 375 aa10.28□□□□□ -0.76
CDC27-216ENST00000574304 NR1H3Q13133 447 aa10.27□□□□□ -0.77
CDC27-216ENST00000574304 VASH1Q7L8A9 365 aaPredicted RBP10.27□□□□□ -0.77
CDC27-216ENST00000574304 HPS1Q92902 700 aa10.27□□□□□ -0.77
CDC27-216ENST00000574304 MAP4K5Q9Y4K4 846 aa10.27□□□□□ -0.77
CDC27-216ENST00000574304 AVPP01185 164 aa10.26□□□□□ -0.77
CDC27-216ENST00000574304 GRM5P41594 1212 aa10.26□□□□□ -0.77
CDC27-216ENST00000574304 ABL2P42684 1182 aa10.26□□□□□ -0.77
CDC27-216ENST00000574304 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
CDC27-216ENST00000574304 UBTFP17480 764 aaKnown RBP10.25□□□□□ -0.77
CDC27-216ENST00000574304 MYT1Q01538 1121 aa10.25□□□□□ -0.77
CDC27-216ENST00000574304 NNTQ13423 1086 aa10.25□□□□□ -0.77
CDC27-216ENST00000574304 IRF5Q13568 498 aa10.25□□□□□ -0.77
CDC27-216ENST00000574304 TRAF7Q6Q0C0 670 aa10.25□□□□□ -0.77
CDC27-216ENST00000574304 DZIP3Q86Y13 1208 aaKnown RBP10.25□□□□□ -0.77
CDC27-216ENST00000574304 CDV3Q9UKY7 258 aaKnown RBP10.25□□□□□ -0.77
CDC27-216ENST00000574304 LCE2BO14633 110 aa10.24□□□□□ -0.77
CDC27-216ENST00000574304 FSHRP23945 695 aa10.24□□□□□ -0.77
CDC27-216ENST00000574304 NR5A1Q13285 461 aa10.24□□□□□ -0.77
CDC27-216ENST00000574304 POM121Q96HA1 1249 aa10.24□□□□□ -0.77
CDC27-216ENST00000574304 RAD21O60216 631 aa10.23□□□□□ -0.77
CDC27-216ENST00000574304 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
CDC27-216ENST00000574304 PCDHB9Q9Y5E1 797 aa10.23□□□□□ -0.77
CDC27-216ENST00000574304 KCTD15Q96SI1 283 aaPredicted RBP10.22□□□□□ -0.77
CDC27-216ENST00000574304 NR3C2P08235 984 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms