RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 BAG6P46379 1132 aa8.26□□□□□ -1.09
TRIM25-208ENST00000574234 ARHGEF1Q92888 912 aaKnown RBP8.26□□□□□ -1.09
TRIM25-208ENST00000574234 ADGRL3Q9HAR2 1447 aa8.26□□□□□ -1.09
TRIM25-208ENST00000574234 SLIT2O94813 1529 aa8.25□□□□□ -1.09
TRIM25-208ENST00000574234 NEUROD2Q15784 382 aa8.25□□□□□ -1.09
TRIM25-208ENST00000574234 DISP2A7MBM2 1401 aa8.25□□□□□ -1.09
TRIM25-208ENST00000574234 PTPRUQ92729 1446 aa8.25□□□□□ -1.09
TRIM25-208ENST00000574234 CEP350Q5VT06 3117 aa8.24□□□□□ -1.09
TRIM25-208ENST00000574234 NUP188Q5SRE5 1749 aa8.24□□□□□ -1.09
TRIM25-208ENST00000574234 ADGRB2O60241 1585 aa8.24□□□□□ -1.09
TRIM25-208ENST00000574234 PRR29P0C7W0 189 aa8.24□□□□□ -1.09
TRIM25-208ENST00000574234 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRIM25-208ENST00000574234 DDX17Q92841 729 aaKnown RBP8.24□□□□□ -1.09
TRIM25-208ENST00000574234 USP32Q8NFA0 1604 aa8.24□□□□□ -1.09
TRIM25-208ENST00000574234 NINLQ9Y2I6 1382 aa8.23□□□□□ -1.09
TRIM25-208ENST00000574234 C1QTNF8P60827 252 aa8.23□□□□□ -1.09
TRIM25-208ENST00000574234 SLC24A3Q9HC58 644 aa8.23□□□□□ -1.09
TRIM25-208ENST00000574234 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
TRIM25-208ENST00000574234 C1orf167Q5SNV9 1468 aa8.23□□□□□ -1.09
TRIM25-208ENST00000574234 KIF15Q9NS87 1388 aa8.22□□□□□ -1.09
TRIM25-208ENST00000574234 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
TRIM25-208ENST00000574234 R3HDM1Q15032 1099 aaKnown RBP8.22□□□□□ -1.09
TRIM25-208ENST00000574234 ZNF784Q8NCA9 323 aaPredicted RBP8.22□□□□□ -1.09
TRIM25-208ENST00000574234 ABCA3Q99758 1704 aa8.22□□□□□ -1.09
TRIM25-208ENST00000574234 TESPA1A2RU30 521 aaPredicted RBP8.21□□□□□ -1.1
TRIM25-208ENST00000574234 UNC5CLQ8IV45 518 aa8.21□□□□□ -1.1
TRIM25-208ENST00000574234 NRAPQ86VF7 1730 aa8.2□□□□□ -1.1
TRIM25-208ENST00000574234 PXDNQ92626 1479 aa8.2□□□□□ -1.1
TRIM25-208ENST00000574234 KRT27Q7Z3Y8 459 aa8.2□□□□□ -1.1
TRIM25-208ENST00000574234 SEPT12Q8IYM1 358 aa8.2□□□□□ -1.1
TRIM25-208ENST00000574234 MYOM3Q5VTT5 1437 aa8.2□□□□□ -1.1
TRIM25-208ENST00000574234 E9PCH4 1651 aa8.19□□□□□ -1.1
TRIM25-208ENST00000574234 CLEC11AQ9Y240 323 aa8.19□□□□□ -1.1
TRIM25-208ENST00000574234 PARD3Q8TEW0 1356 aa8.19□□□□□ -1.1
TRIM25-208ENST00000574234 SEMA3EO15041 775 aa8.18□□□□□ -1.1
TRIM25-208ENST00000574234 EN1Q05925 392 aaPredicted RBP8.18□□□□□ -1.1
TRIM25-208ENST00000574234 E2F4Q16254 413 aa8.18□□□□□ -1.1
TRIM25-208ENST00000574234 ZNF467Q7Z7K2 595 aaPredicted RBP8.18□□□□□ -1.1
TRIM25-208ENST00000574234 AKT1S1Q96B36 256 aa8.18□□□□□ -1.1
TRIM25-208ENST00000574234 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
TRIM25-208ENST00000574234 ZMYND10O75800 440 aa8.17□□□□□ -1.1
TRIM25-208ENST00000574234 PDAP1Q13442 181 aaKnown RBP8.17□□□□□ -1.1
TRIM25-208ENST00000574234 VPS72Q15906 364 aa8.17□□□□□ -1.1
TRIM25-208ENST00000574234 ADGRL2O95490 1459 aa8.17□□□□□ -1.1
TRIM25-208ENST00000574234 THSD7AQ9UPZ6 1657 aa8.17□□□□□ -1.1
TRIM25-208ENST00000574234 RGPD3A6NKT7 1758 aaPredicted RBP8.17□□□□□ -1.1
TRIM25-208ENST00000574234 RGPD4Q7Z3J3 1758 aa8.17□□□□□ -1.1
TRIM25-208ENST00000574234 CASZ1Q86V15 1759 aa8.17□□□□□ -1.1
TRIM25-208ENST00000574234 KIF1AQ12756 1690 aa8.16□□□□□ -1.1
TRIM25-208ENST00000574234 CDC42BPGQ6DT37 1551 aa8.16□□□□□ -1.1
TRIM25-208ENST00000574234 NEXMIFQ5QGS0 1516 aa8.15□□□□□ -1.1
TRIM25-208ENST00000574234 PRAG1Q86YV5 1406 aa8.15□□□□□ -1.1
TRIM25-208ENST00000574234 NPHP3Q7Z494 1330 aa8.15□□□□□ -1.1
TRIM25-208ENST00000574234 MYOM1P52179 1685 aa8.14□□□□□ -1.11
TRIM25-208ENST00000574234 ORAI2Q96SN7 254 aa8.14□□□□□ -1.11
TRIM25-208ENST00000574234 SPON1Q9HCB6 807 aa8.14□□□□□ -1.11
TRIM25-208ENST00000574234 NRKQ7Z2Y5 1582 aa8.14□□□□□ -1.11
TRIM25-208ENST00000574234 ABCC5O15440 1437 aa8.13□□□□□ -1.11
TRIM25-208ENST00000574234 PPP1R37O75864 691 aa8.13□□□□□ -1.11
TRIM25-208ENST00000574234 EZH2Q15910 746 aaKnown RBP8.13□□□□□ -1.11
TRIM25-208ENST00000574234 RRP7BPQ9NSQ0 103 aa8.13□□□□□ -1.11
TRIM25-208ENST00000574234 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
TRIM25-208ENST00000574234 METP08581 1390 aa8.12□□□□□ -1.11
TRIM25-208ENST00000574234 LRPPRCP42704 1394 aaKnown RBP8.12□□□□□ -1.11
TRIM25-208ENST00000574234 KCNQ2O43526 872 aa8.12□□□□□ -1.11
TRIM25-208ENST00000574234 CAMKK2Q96RR4 588 aa8.12□□□□□ -1.11
TRIM25-208ENST00000574234 COL14A1Q05707 1796 aaKnown RBP8.12□□□□□ -1.11
TRIM25-208ENST00000574234 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
TRIM25-208ENST00000574234 REM2Q8IYK8 340 aaPredicted RBP8.11□□□□□ -1.11
TRIM25-208ENST00000574234 PCDHB8Q9UN66 801 aa8.11□□□□□ -1.11
TRIM25-208ENST00000574234 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
TRIM25-208ENST00000574234 DAPK1P53355 1430 aa8.11□□□□□ -1.11
TRIM25-208ENST00000574234 RGPD8O14715 1765 aaPredicted RBP8.1□□□□□ -1.11
TRIM25-208ENST00000574234 FMN2Q9NZ56 1722 aa8.1□□□□□ -1.11
TRIM25-208ENST00000574234 KIF1BO60333 1816 aa8.1□□□□□ -1.11
TRIM25-208ENST00000574234 ANKRD30AQ9BXX3 1397 aa8.1□□□□□ -1.11
TRIM25-208ENST00000574234 SHANK3Q9BYB0 1731 aa8.09□□□□□ -1.11
TRIM25-208ENST00000574234 GIGYF1O75420 1035 aaPredicted RBP8.09□□□□□ -1.11
TRIM25-208ENST00000574234 PSEN1P49768 467 aa8.09□□□□□ -1.11
TRIM25-208ENST00000574234 NBPF8Q3BBV2 869 aa8.09□□□□□ -1.11
TRIM25-208ENST00000574234 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
TRIM25-208ENST00000574234 SMYD5Q6GMV2 418 aa8.09□□□□□ -1.11
TRIM25-208ENST00000574234 FBXO22Q8NEZ5 403 aa8.09□□□□□ -1.11
TRIM25-208ENST00000574234 RBM42Q9BTD8 480 aaKnown RBP8.09□□□□□ -1.11
TRIM25-208ENST00000574234 SBF2Q86WG5 1849 aa8.08□□□□□ -1.12
TRIM25-208ENST00000574234 PODXL2Q9NZ53 605 aa8.08□□□□□ -1.12
TRIM25-208ENST00000574234 HFM1A2PYH4 1435 aa8.08□□□□□ -1.12
TRIM25-208ENST00000574234 CCDC144AA2RUR9 1427 aa8.08□□□□□ -1.12
TRIM25-208ENST00000574234 DLC1Q96QB1 1528 aa8.08□□□□□ -1.12
TRIM25-208ENST00000574234 SPATA31A3Q5VYP0 1347 aa8.07□□□□□ -1.12
TRIM25-208ENST00000574234 IFT172Q9UG01 1749 aa8.07□□□□□ -1.12
TRIM25-208ENST00000574234 CRYBG1Q9Y4K1 1723 aa8.07□□□□□ -1.12
TRIM25-208ENST00000574234 TSPYL2Q9H2G4 693 aaPredicted RBP8.07□□□□□ -1.12
TRIM25-208ENST00000574234 CCDC9Q9Y3X0 531 aaKnown RBP8.07□□□□□ -1.12
TRIM25-208ENST00000574234 ARIH1Q9Y4X5 557 aaPredicted RBP8.07□□□□□ -1.12
TRIM25-208ENST00000574234 A0A0G2JS52 829 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 FOXO3O43524 673 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 NLRP6P59044 892 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 MYT1Q01538 1121 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 FAM98CQ17RN3 349 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms