RNA–Protein interactions for RNA: ENST00000574137.1

NUBP1-206, Transcript of nucleotide binding protein 1, humanhuman

TSL 1 (best)

Gene NUBP1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-206ENST00000574137 ABCA3Q99758 1704 aa19.54■□□□□ 0.72
NUBP1-206ENST00000574137 NUTM2GQ5VZR2 741 aa19.54■□□□□ 0.72
NUBP1-206ENST00000574137 BTG4Q9NY30 223 aa19.54■□□□□ 0.72
NUBP1-206ENST00000574137 ALS2Q96Q42 1657 aa19.53■□□□□ 0.72
NUBP1-206ENST00000574137 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
NUBP1-206ENST00000574137 A0A0G2JS52 829 aa19.52■□□□□ 0.72
NUBP1-206ENST00000574137 MYT1Q01538 1121 aa19.52■□□□□ 0.72
NUBP1-206ENST00000574137 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
NUBP1-206ENST00000574137 PRDM11Q9NQV5 511 aa19.52■□□□□ 0.72
NUBP1-206ENST00000574137 GLI3P10071 1580 aa19.52■□□□□ 0.71
NUBP1-206ENST00000574137 PLCH1Q4KWH8 1693 aa19.52■□□□□ 0.71
NUBP1-206ENST00000574137 NWD2Q9ULI1 1742 aa19.51■□□□□ 0.71
NUBP1-206ENST00000574137 POLR3AO14802 1390 aaPredicted RBP19.51■□□□□ 0.71
NUBP1-206ENST00000574137 ROCK2O75116 1388 aaKnown RBP19.51■□□□□ 0.71
NUBP1-206ENST00000574137 ABTB2Q8N961 1025 aa19.5■□□□□ 0.71
NUBP1-206ENST00000574137 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
NUBP1-206ENST00000574137 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
NUBP1-206ENST00000574137 CCDC125Q86Z20 511 aa19.48■□□□□ 0.71
NUBP1-206ENST00000574137 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
NUBP1-206ENST00000574137 QRICH2Q9H0J4 1663 aa19.47■□□□□ 0.71
NUBP1-206ENST00000574137 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
NUBP1-206ENST00000574137 CABP1Q9NZU7 370 aa19.47■□□□□ 0.71
NUBP1-206ENST00000574137 EP400Q96L91 3159 aa19.47■□□□□ 0.71
NUBP1-206ENST00000574137 COL14A1Q05707 1796 aaKnown RBP19.47■□□□□ 0.71
NUBP1-206ENST00000574137 TOPAZ1Q8N9V7 1692 aa19.46■□□□□ 0.71
NUBP1-206ENST00000574137 KIAA0232Q92628 1395 aa19.46■□□□□ 0.71
NUBP1-206ENST00000574137 ONECUT3O60422 494 aaPredicted RBP19.46■□□□□ 0.71
NUBP1-206ENST00000574137 TRIM26Q12899 539 aaPredicted RBP19.46■□□□□ 0.71
NUBP1-206ENST00000574137 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
NUBP1-206ENST00000574137 TRPM1Q7Z4N2 1603 aa19.46■□□□□ 0.71
NUBP1-206ENST00000574137 KRT27Q7Z3Y8 459 aa19.45■□□□□ 0.7
NUBP1-206ENST00000574137 NLRP13Q86W25 1043 aa19.44■□□□□ 0.7
NUBP1-206ENST00000574137 STRN4Q9NRL3 753 aa19.44■□□□□ 0.7
NUBP1-206ENST00000574137 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
NUBP1-206ENST00000574137 BRWD3Q6RI45 1802 aa19.43■□□□□ 0.7
NUBP1-206ENST00000574137 EVA1CP58658 441 aa19.42■□□□□ 0.7
NUBP1-206ENST00000574137 SF3B2Q13435 895 aaKnown RBP19.42■□□□□ 0.7
NUBP1-206ENST00000574137 SPATA31A5Q5VU36 1347 aa19.42■□□□□ 0.7
NUBP1-206ENST00000574137 SPATA31A7Q8IWB4 1347 aa19.42■□□□□ 0.7
NUBP1-206ENST00000574137 NRAPQ86VF7 1730 aa19.42■□□□□ 0.7
NUBP1-206ENST00000574137 CRYBG1Q9Y4K1 1723 aa19.42■□□□□ 0.7
NUBP1-206ENST00000574137 CARD11Q9BXL7 1154 aa19.41■□□□□ 0.7
NUBP1-206ENST00000574137 ZBTB7CA1YPR0 619 aa19.39■□□□□ 0.69
NUBP1-206ENST00000574137 NLRP6P59044 892 aa19.39■□□□□ 0.69
NUBP1-206ENST00000574137 BLMP54132 1417 aaPredicted RBP19.39■□□□□ 0.69
NUBP1-206ENST00000574137 PHRF1Q9P1Y6 1649 aaKnown RBP19.39■□□□□ 0.69
NUBP1-206ENST00000574137 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
NUBP1-206ENST00000574137 GCP02774 474 aa19.38■□□□□ 0.69
NUBP1-206ENST00000574137 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
NUBP1-206ENST00000574137 USP6P35125 1406 aa19.37■□□□□ 0.69
NUBP1-206ENST00000574137 USP19O94966 1318 aa19.37■□□□□ 0.69
NUBP1-206ENST00000574137 USP35Q9P2H5 1018 aa19.37■□□□□ 0.69
NUBP1-206ENST00000574137 SPATA31A1Q5TZJ5 1347 aa19.36■□□□□ 0.69
NUBP1-206ENST00000574137 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
NUBP1-206ENST00000574137 DEFB132Q7Z7B7 95 aa19.35■□□□□ 0.69
NUBP1-206ENST00000574137 FAM182BQ5T319 152 aa19.34■□□□□ 0.69
NUBP1-206ENST00000574137 CPDO75976 1380 aa19.33■□□□□ 0.69
NUBP1-206ENST00000574137 NRKQ7Z2Y5 1582 aa19.33■□□□□ 0.69
NUBP1-206ENST00000574137 LARP1Q6PKG0 1096 aaKnown RBP19.33■□□□□ 0.68
NUBP1-206ENST00000574137 SSH2Q76I76 1423 aa19.32■□□□□ 0.68
NUBP1-206ENST00000574137 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
NUBP1-206ENST00000574137 TMC1Q8TDI8 760 aa19.31■□□□□ 0.68
NUBP1-206ENST00000574137 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
NUBP1-206ENST00000574137 SOX12O15370 315 aa19.3■□□□□ 0.68
NUBP1-206ENST00000574137 BAG6P46379 1132 aa19.3■□□□□ 0.68
NUBP1-206ENST00000574137 TCP11L2Q8N4U5 519 aa19.29■□□□□ 0.68
NUBP1-206ENST00000574137 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
NUBP1-206ENST00000574137 PDE3BQ13370 1112 aa19.28■□□□□ 0.68
NUBP1-206ENST00000574137 BARGINQ6ZT62 677 aa19.28■□□□□ 0.68
NUBP1-206ENST00000574137 SBNO2Q9Y2G9 1366 aa19.28■□□□□ 0.68
NUBP1-206ENST00000574137 TTC21AQ8NDW8 1320 aa19.27■□□□□ 0.68
NUBP1-206ENST00000574137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.26■□□□□ 0.67
NUBP1-206ENST00000574137 KCNH5Q8NCM2 988 aa19.26■□□□□ 0.67
NUBP1-206ENST00000574137 THSD7AQ9UPZ6 1657 aa19.26■□□□□ 0.67
NUBP1-206ENST00000574137 AATKQ6ZMQ8 1374 aa19.25■□□□□ 0.67
NUBP1-206ENST00000574137 FAM196AQ6ZSG2 479 aa19.25■□□□□ 0.67
NUBP1-206ENST00000574137 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
NUBP1-206ENST00000574137 THRAP3Q9Y2W1 955 aaKnown RBP19.25■□□□□ 0.67
NUBP1-206ENST00000574137 SLIT3O75094 1523 aa19.25■□□□□ 0.67
NUBP1-206ENST00000574137 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
NUBP1-206ENST00000574137 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
NUBP1-206ENST00000574137 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
NUBP1-206ENST00000574137 LMO7Q8WWI1 1683 aa19.24■□□□□ 0.67
NUBP1-206ENST00000574137 TOM1L2Q6ZVM7 507 aa19.24■□□□□ 0.67
NUBP1-206ENST00000574137 SRCAPQ6ZRS2 3230 aa19.24■□□□□ 0.67
NUBP1-206ENST00000574137 COL5A2P05997 1499 aaPredicted RBP19.23■□□□□ 0.67
NUBP1-206ENST00000574137 EN1Q05925 392 aaPredicted RBP19.23■□□□□ 0.67
NUBP1-206ENST00000574137 SLC12A5Q9H2X9 1139 aa19.23■□□□□ 0.67
NUBP1-206ENST00000574137 ST20-MTHFSA0A0A6YYL1 179 aa19.22■□□□□ 0.67
NUBP1-206ENST00000574137 TRIM37O94972 964 aa19.22■□□□□ 0.67
NUBP1-206ENST00000574137 ARHGEF25Q86VW2 580 aa19.22■□□□□ 0.67
NUBP1-206ENST00000574137 CSB-PGBD3P0DP91 1061 aa19.21■□□□□ 0.67
NUBP1-206ENST00000574137 CRB1P82279 1406 aa19.21■□□□□ 0.67
NUBP1-206ENST00000574137 TERF2IPQ9NYB0 399 aa19.21■□□□□ 0.67
NUBP1-206ENST00000574137 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
NUBP1-206ENST00000574137 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
NUBP1-206ENST00000574137 NME9Q86XW9 330 aa19.19■□□□□ 0.66
NUBP1-206ENST00000574137 PUS7Q96PZ0 661 aaKnown RBP19.19■□□□□ 0.66
NUBP1-206ENST00000574137 PCGF6Q9BYE7 350 aa19.19■□□□□ 0.66
NUBP1-206ENST00000574137 RGPD1P0DJD0 1748 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms