RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 RTF1Q92541 710 aaKnown RBP23.59■■□□□ 1.37
SLC12A4-212ENST00000573023 POGZQ7Z3K3 1410 aa23.59■■□□□ 1.37
SLC12A4-212ENST00000573023 TWISTNBQ3B726 338 aaPredicted RBP23.58■■□□□ 1.37
SLC12A4-212ENST00000573023 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
SLC12A4-212ENST00000573023 LMOD3Q0VAK6 560 aa23.58■■□□□ 1.37
SLC12A4-212ENST00000573023 NGDNQ8NEJ9 315 aaKnown RBP23.58■■□□□ 1.37
SLC12A4-212ENST00000573023 CT47B1P0C2W7 299 aaPredicted RBP23.58■■□□□ 1.36
SLC12A4-212ENST00000573023 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 NUDT16Q96DE0 195 aaKnown RBP23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 PHACTR3Q96KR7 559 aa23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 TRIM35Q9UPQ4 493 aa23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 TET3O43151 1660 aa23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 MYOM2P54296 1465 aa23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 FAM83GA6ND36 823 aa23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 SULT6B1Q6IMI4 303 aa23.57■■□□□ 1.36
SLC12A4-212ENST00000573023 NSD2O96028 1365 aa23.56■■□□□ 1.36
SLC12A4-212ENST00000573023 POLKQ9UBT6 870 aa23.56■■□□□ 1.36
SLC12A4-212ENST00000573023 SPHKAPQ2M3C7 1700 aa23.55■■□□□ 1.36
SLC12A4-212ENST00000573023 NFE2L2Q16236 605 aa23.55■■□□□ 1.36
SLC12A4-212ENST00000573023 SLC26A8Q96RN1 970 aa23.55■■□□□ 1.36
SLC12A4-212ENST00000573023 NECTIN2Q92692 538 aa23.54■■□□□ 1.36
SLC12A4-212ENST00000573023 CCDC61Q9Y6R9 512 aa23.53■■□□□ 1.36
SLC12A4-212ENST00000573023 AMPHP49418 695 aa23.53■■□□□ 1.36
SLC12A4-212ENST00000573023 NUTM2GQ5VZR2 741 aa23.53■■□□□ 1.36
SLC12A4-212ENST00000573023 TBC1D2Q9BYX2 928 aa23.53■■□□□ 1.36
SLC12A4-212ENST00000573023 NCLP19338 710 aaKnown RBP23.52■■□□□ 1.36
SLC12A4-212ENST00000573023 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
SLC12A4-212ENST00000573023 LMOD2Q6P5Q4 547 aa23.52■■□□□ 1.36
SLC12A4-212ENST00000573023 MAP3K4Q9Y6R4 1608 aa23.52■■□□□ 1.35
SLC12A4-212ENST00000573023 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 LAMC1P11047 1609 aa23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 PUS7Q96PZ0 661 aaKnown RBP23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 EFCAB6Q5THR3 1501 aa23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
SLC12A4-212ENST00000573023 CHD1LQ86WJ1 897 aa23.5■■□□□ 1.35
SLC12A4-212ENST00000573023 API5Q9BZZ5 524 aaKnown RBP23.49■■□□□ 1.35
SLC12A4-212ENST00000573023 MIS18AQ9NYP9 233 aa23.49■■□□□ 1.35
SLC12A4-212ENST00000573023 TBC1D32Q96NH3 1257 aa23.48■■□□□ 1.35
SLC12A4-212ENST00000573023 MCM10Q7L590 875 aa23.47■■□□□ 1.35
SLC12A4-212ENST00000573023 YTHDC2Q9H6S0 1430 aaKnown RBP23.47■■□□□ 1.35
SLC12A4-212ENST00000573023 ABCA6Q8N139 1617 aa23.47■■□□□ 1.35
SLC12A4-212ENST00000573023 EID1Q9Y6B2 187 aa23.47■■□□□ 1.35
SLC12A4-212ENST00000573023 RNF17Q9BXT8 1623 aaKnown RBP23.47■■□□□ 1.35
SLC12A4-212ENST00000573023 ARAP3Q8WWN8 1544 aa23.46■■□□□ 1.35
SLC12A4-212ENST00000573023 HAP1P54257 671 aaPredicted RBP23.46■■□□□ 1.35
SLC12A4-212ENST00000573023 CASC1Q6TDU7 716 aa23.46■■□□□ 1.35
SLC12A4-212ENST00000573023 MBIPQ9NS73 344 aa23.46■■□□□ 1.35
SLC12A4-212ENST00000573023 KIF1BO60333 1816 aa23.45■■□□□ 1.34
SLC12A4-212ENST00000573023 CHMP5Q9NZZ3 219 aa23.45■■□□□ 1.34
SLC12A4-212ENST00000573023 ABCC11Q96J66 1382 aa23.45■■□□□ 1.34
SLC12A4-212ENST00000573023 TPRNQ4KMQ1 711 aa23.44■■□□□ 1.34
SLC12A4-212ENST00000573023 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
SLC12A4-212ENST00000573023 AEBP1Q8IUX7 1158 aa23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 GOLGA6L22H0YM25 854 aa23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 C8orf58Q8NAV2 365 aa23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 STK31Q9BXU1 1019 aa23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 MLH3Q9UHC1 1453 aa23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 CEBPAP49715 358 aaPredicted RBP23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 ALDH1L2Q3SY69 923 aa23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 ZBTB40Q9NUA8 1239 aa23.42■■□□□ 1.34
SLC12A4-212ENST00000573023 KRT24Q2M2I5 525 aa23.41■■□□□ 1.34
SLC12A4-212ENST00000573023 RSPH6AQ9H0K4 717 aa23.41■■□□□ 1.34
SLC12A4-212ENST00000573023 GOLGA6L3A6NEY3 463 aa23.41■■□□□ 1.34
SLC12A4-212ENST00000573023 L1TD1Q5T7N2 865 aaKnown RBP23.41■■□□□ 1.34
SLC12A4-212ENST00000573023 HDAC1Q13547 482 aaPredicted RBP23.4■■□□□ 1.34
SLC12A4-212ENST00000573023 TSPYL4Q9UJ04 414 aa23.4■■□□□ 1.34
SLC12A4-212ENST00000573023 IQGAP1P46940 1657 aa23.4■■□□□ 1.34
SLC12A4-212ENST00000573023 IL16Q14005 1332 aa23.4■■□□□ 1.34
SLC12A4-212ENST00000573023 VAMP4O75379 141 aa23.39■■□□□ 1.34
SLC12A4-212ENST00000573023 SLC4A2P04920 1241 aa23.39■■□□□ 1.33
SLC12A4-212ENST00000573023 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.33
SLC12A4-212ENST00000573023 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
SLC12A4-212ENST00000573023 GCC1Q96CN9 775 aa23.38■■□□□ 1.33
SLC12A4-212ENST00000573023 IFT57Q9NWB7 429 aa23.38■■□□□ 1.33
SLC12A4-212ENST00000573023 INO80Q9ULG1 1556 aaPredicted RBP23.37■■□□□ 1.33
SLC12A4-212ENST00000573023 PPRC1Q5VV67 1664 aaKnown RBP23.37■■□□□ 1.33
SLC12A4-212ENST00000573023 NLRP6P59044 892 aa23.37■■□□□ 1.33
SLC12A4-212ENST00000573023 NOL8Q76FK4 1167 aaKnown RBP23.37■■□□□ 1.33
SLC12A4-212ENST00000573023 ANP32BQ92688 251 aaKnown RBP23.37■■□□□ 1.33
SLC12A4-212ENST00000573023 HSP90AB2PQ58FF8 381 aa23.37■■□□□ 1.33
SLC12A4-212ENST00000573023 CEP152O94986 1710 aa23.36■■□□□ 1.33
SLC12A4-212ENST00000573023 ABCA9Q8IUA7 1624 aa23.36■■□□□ 1.33
SLC12A4-212ENST00000573023 GBP4Q96PP9 640 aa23.36■■□□□ 1.33
SLC12A4-212ENST00000573023 ABCC3O15438 1527 aa23.36■■□□□ 1.33
SLC12A4-212ENST00000573023 CFAP44Q96MT7 982 aa23.35■■□□□ 1.33
SLC12A4-212ENST00000573023 SMC5Q8IY18 1101 aa23.35■■□□□ 1.33
SLC12A4-212ENST00000573023 FOXD4L5Q5VV16 416 aaPredicted RBP23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 FOXD4L4Q8WXT5 416 aaPredicted RBP23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 ZNF428Q96B54 188 aa23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 TRIM6-TRIM34B2RNG4 842 aa23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 TRHP20396 242 aaPredicted RBP23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 USP19O94966 1318 aa23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 NUCB1Q02818 461 aa23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
SLC12A4-212ENST00000573023 HMMRO75330 724 aa23.33■■□□□ 1.33
SLC12A4-212ENST00000573023 MRPL50Q8N5N7 158 aaKnown RBP23.33■■□□□ 1.33
SLC12A4-212ENST00000573023 TRIM44Q96DX7 344 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms