RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 RIC3Q7Z5B4 369 aa8.21□□□□□ -1.1
NCBP3-202ENST00000572988 THAP11Q96EK4 314 aa8.21□□□□□ -1.1
NCBP3-202ENST00000572988 RSPH6AQ9H0K4 717 aa8.21□□□□□ -1.1
NCBP3-202ENST00000572988 SALL2Q9Y467 1007 aaPredicted RBP8.21□□□□□ -1.1
NCBP3-202ENST00000572988 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
NCBP3-202ENST00000572988 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
NCBP3-202ENST00000572988 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
NCBP3-202ENST00000572988 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
NCBP3-202ENST00000572988 IL27Q8NEV9 243 aa8.19□□□□□ -1.1
NCBP3-202ENST00000572988 USB1Q9BQ65 265 aaKnown RBP8.19□□□□□ -1.1
NCBP3-202ENST00000572988 POLR3EQ9NVU0 708 aa8.19□□□□□ -1.1
NCBP3-202ENST00000572988 PCDHGC3Q9UN70 934 aa8.19□□□□□ -1.1
NCBP3-202ENST00000572988 PDZRN3Q9UPQ7 1066 aa8.19□□□□□ -1.1
NCBP3-202ENST00000572988 KIAA0586Q9BVV6 1533 aa8.19□□□□□ -1.1
NCBP3-202ENST00000572988 PPEF1O14829 653 aaPredicted RBP8.18□□□□□ -1.1
NCBP3-202ENST00000572988 SPTLC1O15269 473 aa8.18□□□□□ -1.1
NCBP3-202ENST00000572988 FAM160A2Q8N612 972 aaPredicted RBP8.18□□□□□ -1.1
NCBP3-202ENST00000572988 SHROOM2Q13796 1616 aa8.18□□□□□ -1.1
NCBP3-202ENST00000572988 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
NCBP3-202ENST00000572988 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
NCBP3-202ENST00000572988 PTPRGP23470 1445 aa8.17□□□□□ -1.1
NCBP3-202ENST00000572988 RUSC2Q8N2Y8 1516 aa8.17□□□□□ -1.1
NCBP3-202ENST00000572988 NUTM2BA6NNL0 878 aaPredicted RBP8.16□□□□□ -1.1
NCBP3-202ENST00000572988 NUTM2EB1AL46 878 aaPredicted RBP8.16□□□□□ -1.1
NCBP3-202ENST00000572988 GJA5P36382 358 aa8.16□□□□□ -1.1
NCBP3-202ENST00000572988 NUTM2DQ5VT03 806 aaPredicted RBP8.16□□□□□ -1.1
NCBP3-202ENST00000572988 NUTM2AQ8IVF1 878 aaPredicted RBP8.16□□□□□ -1.1
NCBP3-202ENST00000572988 PRDM9Q9NQV7 894 aa8.16□□□□□ -1.1
NCBP3-202ENST00000572988 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
NCBP3-202ENST00000572988 PLEKHG3A1L390 1219 aa8.15□□□□□ -1.1
NCBP3-202ENST00000572988 CLK2P49760 499 aaKnown RBP8.15□□□□□ -1.1
NCBP3-202ENST00000572988 MTMR2Q13614 643 aa8.15□□□□□ -1.1
NCBP3-202ENST00000572988 MSS51Q4VC12 460 aa8.15□□□□□ -1.1
NCBP3-202ENST00000572988 RETREG3Q86VR2 466 aa8.15□□□□□ -1.1
NCBP3-202ENST00000572988 EMID1Q96A84 441 aaPredicted RBP8.15□□□□□ -1.1
NCBP3-202ENST00000572988 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
NCBP3-202ENST00000572988 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
NCBP3-202ENST00000572988 ZBTB3Q9H5J0 574 aa8.14□□□□□ -1.11
NCBP3-202ENST00000572988 SPDYE5A6NIY4 337 aa8.13□□□□□ -1.11
NCBP3-202ENST00000572988 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
NCBP3-202ENST00000572988 TRIM67Q6ZTA4 783 aa8.13□□□□□ -1.11
NCBP3-202ENST00000572988 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
NCBP3-202ENST00000572988 PRR7Q8TB68 274 aa8.13□□□□□ -1.11
NCBP3-202ENST00000572988 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
NCBP3-202ENST00000572988 TNIKQ9UKE5 1360 aa8.12□□□□□ -1.11
NCBP3-202ENST00000572988 HRCP23327 699 aa8.12□□□□□ -1.11
NCBP3-202ENST00000572988 CCDC24Q8N4L8 307 aa8.12□□□□□ -1.11
NCBP3-202ENST00000572988 TSC1Q92574 1164 aa8.12□□□□□ -1.11
NCBP3-202ENST00000572988 FCF1Q9Y324 198 aaKnown RBP8.12□□□□□ -1.11
NCBP3-202ENST00000572988 ABCC10Q5T3U5 1492 aa8.12□□□□□ -1.11
NCBP3-202ENST00000572988 JUNDP17535 347 aa8.11□□□□□ -1.11
NCBP3-202ENST00000572988 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
NCBP3-202ENST00000572988 PROCA1Q8NCQ7 364 aaPredicted RBP8.11□□□□□ -1.11
NCBP3-202ENST00000572988 EEA1Q15075 1411 aa8.11□□□□□ -1.11
NCBP3-202ENST00000572988 CARMIL2Q6F5E8 1435 aa8.11□□□□□ -1.11
NCBP3-202ENST00000572988 SLC19A1P41440 591 aa8.1□□□□□ -1.11
NCBP3-202ENST00000572988 QPCTQ16769 361 aa8.1□□□□□ -1.11
NCBP3-202ENST00000572988 TUSC1Q2TAM9 212 aa8.1□□□□□ -1.11
NCBP3-202ENST00000572988 PCMTD1Q96MG8 357 aaPredicted RBP8.1□□□□□ -1.11
NCBP3-202ENST00000572988 RAPGEF2Q9Y4G8 1499 aa8.09□□□□□ -1.11
NCBP3-202ENST00000572988 ZBTB24O43167 697 aaPredicted RBP8.09□□□□□ -1.11
NCBP3-202ENST00000572988 LILRB3O75022 631 aa8.09□□□□□ -1.11
NCBP3-202ENST00000572988 DXOO77932 396 aaKnown RBP8.09□□□□□ -1.11
NCBP3-202ENST00000572988 MMP16P51512 607 aa8.09□□□□□ -1.11
NCBP3-202ENST00000572988 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
NCBP3-202ENST00000572988 ZNF775Q96BV0 537 aaPredicted RBP8.08□□□□□ -1.12
NCBP3-202ENST00000572988 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
NCBP3-202ENST00000572988 PLA2G2CQ5R387 149 aa8.07□□□□□ -1.12
NCBP3-202ENST00000572988 LIAT1Q6ZQX7 453 aa8.07□□□□□ -1.12
NCBP3-202ENST00000572988 CUL7Q14999 1698 aa8.07□□□□□ -1.12
NCBP3-202ENST00000572988 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
NCBP3-202ENST00000572988 UACAQ9BZF9 1416 aa8.06□□□□□ -1.12
NCBP3-202ENST00000572988 SPRYD7Q5W111 196 aa8.06□□□□□ -1.12
NCBP3-202ENST00000572988 NUDT12Q9BQG2 462 aa8.06□□□□□ -1.12
NCBP3-202ENST00000572988 DISP1Q96F81 1524 aa8.06□□□□□ -1.12
NCBP3-202ENST00000572988 MAPKBP1O60336 1514 aa8.05□□□□□ -1.12
NCBP3-202ENST00000572988 POTECB2RU33 542 aa8.05□□□□□ -1.12
NCBP3-202ENST00000572988 MYT1Q01538 1121 aa8.05□□□□□ -1.12
NCBP3-202ENST00000572988 FAM9AQ8IZU1 332 aaPredicted RBP8.05□□□□□ -1.12
NCBP3-202ENST00000572988 HELBQ8NG08 1087 aaPredicted RBP8.05□□□□□ -1.12
NCBP3-202ENST00000572988 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
NCBP3-202ENST00000572988 ASXL2Q76L83 1435 aa8.04□□□□□ -1.12
NCBP3-202ENST00000572988 CD2BP2O95400 341 aaKnown RBP8.04□□□□□ -1.12
NCBP3-202ENST00000572988 CCNYL3P0C7X3 344 aa8.04□□□□□ -1.12
NCBP3-202ENST00000572988 DESI1Q6ICB0 168 aa8.04□□□□□ -1.12
NCBP3-202ENST00000572988 ZNF598Q86UK7 904 aaKnown RBP8.04□□□□□ -1.12
NCBP3-202ENST00000572988 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.04□□□□□ -1.12
NCBP3-202ENST00000572988 ABCC2Q92887 1545 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 IQGAP2Q13576 1575 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 ARID3CA6NKF2 412 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 CTHP32929 405 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 RANGAP1P46060 587 aaPredicted RBP8.03□□□□□ -1.12
NCBP3-202ENST00000572988 RPIAP49247 311 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 PTPRNQ16849 979 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 KIF13AQ9H1H9 1805 aa8.03□□□□□ -1.12
NCBP3-202ENST00000572988 UHRF1BP1LA0JNW5 1464 aa8.02□□□□□ -1.13
NCBP3-202ENST00000572988 PLB1Q6P1J6 1458 aa8.02□□□□□ -1.13
NCBP3-202ENST00000572988 PKDCCQ504Y2 493 aa8.02□□□□□ -1.13
NCBP3-202ENST00000572988 UGGT2Q9NYU1 1516 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms