RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
NPLOC4-210ENST00000572824 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
NPLOC4-210ENST00000572824 JCADQ9P266 1359 aa13.96□□□□□ -0.17
NPLOC4-210ENST00000572824 ATMINO43313 823 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-210ENST00000572824 HDGFP51858 240 aaKnown RBP13.96□□□□□ -0.17
NPLOC4-210ENST00000572824 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-210ENST00000572824 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-210ENST00000572824 ADGRL3Q9HAR2 1447 aa13.96□□□□□ -0.18
NPLOC4-210ENST00000572824 NCOA3Q9Y6Q9 1424 aa13.96□□□□□ -0.18
NPLOC4-210ENST00000572824 C19orf44Q9H6X5 657 aa13.95□□□□□ -0.18
NPLOC4-210ENST00000572824 ROBO2Q9HCK4 1378 aa13.95□□□□□ -0.18
NPLOC4-210ENST00000572824 ATF3P18847 181 aa13.93□□□□□ -0.18
NPLOC4-210ENST00000572824 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
NPLOC4-210ENST00000572824 DCCP43146 1447 aa13.92□□□□□ -0.18
NPLOC4-210ENST00000572824 PPP1R37O75864 691 aa13.92□□□□□ -0.18
NPLOC4-210ENST00000572824 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
NPLOC4-210ENST00000572824 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-210ENST00000572824 PTCH1Q13635 1447 aa13.9□□□□□ -0.19
NPLOC4-210ENST00000572824 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.19
NPLOC4-210ENST00000572824 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.19
NPLOC4-210ENST00000572824 C1orf167Q5SNV9 1468 aa13.89□□□□□ -0.19
NPLOC4-210ENST00000572824 NUTM2BA6NNL0 878 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-210ENST00000572824 NUTM2EB1AL46 878 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-210ENST00000572824 NUTM2AQ8IVF1 878 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-210ENST00000572824 DCBLD2Q96PD2 775 aa13.88□□□□□ -0.19
NPLOC4-210ENST00000572824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
NPLOC4-210ENST00000572824 LAMC1P11047 1609 aa13.88□□□□□ -0.19
NPLOC4-210ENST00000572824 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
NPLOC4-210ENST00000572824 PNPLA6Q8IY17 1366 aa13.86□□□□□ -0.19
NPLOC4-210ENST00000572824 PLEKHH1Q9ULM0 1364 aa13.86□□□□□ -0.19
NPLOC4-210ENST00000572824 ORAI2Q96SN7 254 aa13.86□□□□□ -0.19
NPLOC4-210ENST00000572824 SETD5Q9C0A6 1442 aa13.86□□□□□ -0.19
NPLOC4-210ENST00000572824 RGPD8O14715 1765 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-210ENST00000572824 PRAG1Q86YV5 1406 aa13.85□□□□□ -0.19
NPLOC4-210ENST00000572824 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
NPLOC4-210ENST00000572824 SPATA31A6Q5VVP1 1343 aa13.85□□□□□ -0.19
NPLOC4-210ENST00000572824 CDC42BPGQ6DT37 1551 aa13.84□□□□□ -0.19
NPLOC4-210ENST00000572824 CCDC144AA2RUR9 1427 aa13.84□□□□□ -0.19
NPLOC4-210ENST00000572824 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-210ENST00000572824 IER5LQ5T953 404 aa13.83□□□□□ -0.2
NPLOC4-210ENST00000572824 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-210ENST00000572824 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.2
NPLOC4-210ENST00000572824 FMN2Q9NZ56 1722 aa13.83□□□□□ -0.2
NPLOC4-210ENST00000572824 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
NPLOC4-210ENST00000572824 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
NPLOC4-210ENST00000572824 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
NPLOC4-210ENST00000572824 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
NPLOC4-210ENST00000572824 WAPLQ7Z5K2 1190 aa13.81□□□□□ -0.2
NPLOC4-210ENST00000572824 STK26Q9P289 416 aa13.81□□□□□ -0.2
NPLOC4-210ENST00000572824 AFF2P51816 1311 aa13.81□□□□□ -0.2
NPLOC4-210ENST00000572824 XPCQ01831 940 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-210ENST00000572824 RPGRIP1LQ68CZ1 1315 aa13.8□□□□□ -0.2
NPLOC4-210ENST00000572824 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
NPLOC4-210ENST00000572824 TECPR2O15040 1411 aa13.8□□□□□ -0.2
NPLOC4-210ENST00000572824 PXDNQ92626 1479 aa13.8□□□□□ -0.2
NPLOC4-210ENST00000572824 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-210ENST00000572824 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-210ENST00000572824 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
NPLOC4-210ENST00000572824 RGS12O14924 1447 aa13.79□□□□□ -0.2
NPLOC4-210ENST00000572824 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-210ENST00000572824 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
NPLOC4-210ENST00000572824 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
NPLOC4-210ENST00000572824 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-210ENST00000572824 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.21
NPLOC4-210ENST00000572824 USP32Q8NFA0 1604 aa13.77□□□□□ -0.21
NPLOC4-210ENST00000572824 OCEL1Q9H607 264 aa13.77□□□□□ -0.21
NPLOC4-210ENST00000572824 NRXN1Q9ULB1 1477 aa13.77□□□□□ -0.21
NPLOC4-210ENST00000572824 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-210ENST00000572824 SOS2Q07890 1332 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-210ENST00000572824 MYOM2P54296 1465 aa13.75□□□□□ -0.21
NPLOC4-210ENST00000572824 ABCA3Q99758 1704 aa13.75□□□□□ -0.21
NPLOC4-210ENST00000572824 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
NPLOC4-210ENST00000572824 ZNF772Q68DY9 489 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-210ENST00000572824 LRRC59Q96AG4 307 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-210ENST00000572824 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
NPLOC4-210ENST00000572824 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
NPLOC4-210ENST00000572824 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
NPLOC4-210ENST00000572824 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
NPLOC4-210ENST00000572824 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
NPLOC4-210ENST00000572824 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
NPLOC4-210ENST00000572824 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
NPLOC4-210ENST00000572824 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
NPLOC4-210ENST00000572824 FOXO3O43524 673 aa13.71□□□□□ -0.21
NPLOC4-210ENST00000572824 PLCG2P16885 1265 aa13.71□□□□□ -0.21
NPLOC4-210ENST00000572824 C7P10643 843 aa13.7□□□□□ -0.22
NPLOC4-210ENST00000572824 RXRBP28702 533 aa13.7□□□□□ -0.22
NPLOC4-210ENST00000572824 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-210ENST00000572824 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-210ENST00000572824 ARHGEF28Q8N1W1 1705 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-210ENST00000572824 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
NPLOC4-210ENST00000572824 SEC24BO95487 1268 aa13.68□□□□□ -0.22
NPLOC4-210ENST00000572824 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-210ENST00000572824 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-210ENST00000572824 ADGRB2O60241 1585 aa13.67□□□□□ -0.22
NPLOC4-210ENST00000572824 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
NPLOC4-210ENST00000572824 NGLY1Q96IV0 654 aa13.67□□□□□ -0.22
NPLOC4-210ENST00000572824 C14orf93Q9H972 538 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-210ENST00000572824 EP400Q96L91 3159 aa13.67□□□□□ -0.22
NPLOC4-210ENST00000572824 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-210ENST00000572824 BCL9LQ86UU0 1499 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms