RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 HDGFL1Q5TGJ6 251 aa24.85■■□□□ 1.57
EDC4-204ENST00000572221 PDCP20941 246 aa24.85■■□□□ 1.57
EDC4-204ENST00000572221 SULT6B1Q6IMI4 303 aa24.85■■□□□ 1.57
EDC4-204ENST00000572221 HMGXB3Q12766 1538 aa24.84■■□□□ 1.57
EDC4-204ENST00000572221 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
EDC4-204ENST00000572221 RTEL1-TNFRSF6BF6WH68 1400 aa24.84■■□□□ 1.57
EDC4-204ENST00000572221 POLA1P09884 1462 aaPredicted RBP24.84■■□□□ 1.57
EDC4-204ENST00000572221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.83■■□□□ 1.571e-6■■□□□ 13.5
EDC4-204ENST00000572221 NAT10Q9H0A0 1025 aaKnown RBP24.83■■□□□ 1.57
EDC4-204ENST00000572221 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
EDC4-204ENST00000572221 HOMER1Q86YM7 354 aa24.82■■□□□ 1.56
EDC4-204ENST00000572221 RABEP1Q15276 862 aa24.82■■□□□ 1.56
EDC4-204ENST00000572221 NBPF8Q3BBV2 869 aa24.82■■□□□ 1.56
EDC4-204ENST00000572221 PDZRN3Q9UPQ7 1066 aa24.81■■□□□ 1.56
EDC4-204ENST00000572221 DAPK1P53355 1430 aa24.81■■□□□ 1.56
EDC4-204ENST00000572221 POGZQ7Z3K3 1410 aa24.81■■□□□ 1.56
EDC4-204ENST00000572221 ERBINQ96RT1 1412 aa24.81■■□□□ 1.56
EDC4-204ENST00000572221 SLC4A2P04920 1241 aa24.81■■□□□ 1.56
EDC4-204ENST00000572221 NESP48681 1621 aa24.81■■□□□ 1.56
EDC4-204ENST00000572221 ZNF592Q92610 1267 aa24.8■■□□□ 1.56
EDC4-204ENST00000572221 ANKLE2Q86XL3 938 aa24.8■■□□□ 1.56
EDC4-204ENST00000572221 ZNF428Q96B54 188 aa24.8■■□□□ 1.56
EDC4-204ENST00000572221 RBM42Q9BTD8 480 aaKnown RBP24.8■■□□□ 1.56
EDC4-204ENST00000572221 SPG7Q9UQ90 795 aa24.8■■□□□ 1.56
EDC4-204ENST00000572221 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
EDC4-204ENST00000572221 SLC3A2P08195 630 aaKnown RBP24.8■■□□□ 1.56
EDC4-204ENST00000572221 ZNF530Q6P9A1 599 aaPredicted RBP24.79■■□□□ 1.56
EDC4-204ENST00000572221 MBD3O95983 291 aa24.78■■□□□ 1.56
EDC4-204ENST00000572221 OLFM4Q6UX06 510 aa24.78■■□□□ 1.56
EDC4-204ENST00000572221 SDF4Q9BRK5 362 aa24.78■■□□□ 1.56
EDC4-204ENST00000572221 ANO8Q9HCE9 1232 aaPredicted RBP24.78■■□□□ 1.56
EDC4-204ENST00000572221 NOB1Q9ULX3 412 aaKnown RBP24.78■■□□□ 1.56
EDC4-204ENST00000572221 CCDC158Q5M9N0 1113 aa24.78■■□□□ 1.56
EDC4-204ENST00000572221 SRCIN1Q9C0H9 1055 aa24.78■■□□□ 1.56
EDC4-204ENST00000572221 FYB1O15117 783 aa24.78■■□□□ 1.56
EDC4-204ENST00000572221 GNL3LQ9NVN8 582 aaKnown RBP24.78■■□□□ 1.56
EDC4-204ENST00000572221 DNAJC2Q99543 621 aaKnown RBP24.77■■□□□ 1.56
EDC4-204ENST00000572221 TIAM1Q13009 1591 aa24.77■■□□□ 1.56
EDC4-204ENST00000572221 LETM1O95202 739 aaPredicted RBP24.77■■□□□ 1.56
EDC4-204ENST00000572221 HSP90AA2PQ14568 343 aaPredicted RBP24.77■■□□□ 1.56
EDC4-204ENST00000572221 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.77■■□□□ 1.56
EDC4-204ENST00000572221 NEK4P51957 841 aa24.77■■□□□ 1.56
EDC4-204ENST00000572221 CABP4P57796 275 aa24.77■■□□□ 1.56
EDC4-204ENST00000572221 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.76■■□□□ 1.55
EDC4-204ENST00000572221 FOSBP53539 338 aa24.76■■□□□ 1.55
EDC4-204ENST00000572221 CWC22Q9HCG8 908 aaKnown RBP24.75■■□□□ 1.55
EDC4-204ENST00000572221 STRN4Q9NRL3 753 aa24.75■■□□□ 1.55
EDC4-204ENST00000572221 TSR2Q969E8 191 aaKnown RBP24.75■■□□□ 1.55
EDC4-204ENST00000572221 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.75■■□□□ 1.555e-7■■■■■ 28.6
EDC4-204ENST00000572221 KIAA0586Q9BVV6 1533 aa24.75■■□□□ 1.55
EDC4-204ENST00000572221 ATF7IPQ6VMQ6 1270 aa24.75■■□□□ 1.55
EDC4-204ENST00000572221 FCHSD2O94868 740 aa24.74■■□□□ 1.55
EDC4-204ENST00000572221 CNNM1Q9NRU3 951 aa24.74■■□□□ 1.55
EDC4-204ENST00000572221 TOM1L2Q6ZVM7 507 aa24.73■■□□□ 1.55
EDC4-204ENST00000572221 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.73■■□□□ 1.55
EDC4-204ENST00000572221 LRRCC1Q9C099 1032 aa24.73■■□□□ 1.55
EDC4-204ENST00000572221 MRE11P49959 708 aa24.72■■□□□ 1.55
EDC4-204ENST00000572221 NFKBIBQ15653 356 aa24.72■■□□□ 1.55
EDC4-204ENST00000572221 RAPGEF3O95398 923 aa24.71■■□□□ 1.55
EDC4-204ENST00000572221 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
EDC4-204ENST00000572221 TTC39AQ5SRH9 613 aa24.71■■□□□ 1.55
EDC4-204ENST00000572221 SUPT6HQ7KZ85 1726 aaKnown RBP24.71■■□□□ 1.55
EDC4-204ENST00000572221 ANKRD1Q15327 319 aa24.7■■□□□ 1.54
EDC4-204ENST00000572221 FAM177BA6PVY3 158 aa24.7■■□□□ 1.54
EDC4-204ENST00000572221 KINO60870 393 aaKnown RBP24.7■■□□□ 1.54
EDC4-204ENST00000572221 ZNF396Q96N95 335 aaPredicted RBP24.7■■□□□ 1.54
EDC4-204ENST00000572221 CCDC61Q9Y6R9 512 aa24.69■■□□□ 1.54
EDC4-204ENST00000572221 MVPQ14764 893 aaKnown RBP24.69■■□□□ 1.54
EDC4-204ENST00000572221 C1orf115Q9H7X2 142 aa24.69■■□□□ 1.54
EDC4-204ENST00000572221 BCAR3O75815 825 aa24.68■■□□□ 1.54
EDC4-204ENST00000572221 NACAP1Q9BZK3 213 aa24.68■■□□□ 1.54
EDC4-204ENST00000572221 IKQ13123 557 aaPredicted RBP24.68■■□□□ 1.54
EDC4-204ENST00000572221 SLC26A8Q96RN1 970 aa24.68■■□□□ 1.54
EDC4-204ENST00000572221 IFT57Q9NWB7 429 aa24.68■■□□□ 1.54
EDC4-204ENST00000572221 PRDM11Q9NQV5 511 aa24.67■■□□□ 1.54
EDC4-204ENST00000572221 R3HCC1Q9Y3T6 440 aaKnown RBP24.67■■□□□ 1.54
EDC4-204ENST00000572221 TXLNAP40222 546 aa24.67■■□□□ 1.54
EDC4-204ENST00000572221 OFD1O75665 1012 aa24.67■■□□□ 1.54
EDC4-204ENST00000572221 SAMD1Q6SPF0 538 aaPredicted RBP24.67■■□□□ 1.54
EDC4-204ENST00000572221 JMYQ8N9B5 988 aa24.67■■□□□ 1.54
EDC4-204ENST00000572221 CYP46A1Q9Y6A2 500 aa24.67■■□□□ 1.54
EDC4-204ENST00000572221 ZSCAN25Q6NSZ9 544 aa24.66■■□□□ 1.54
EDC4-204ENST00000572221 KLHL34Q8N239 644 aa24.66■■□□□ 1.54
EDC4-204ENST00000572221 FAM43AQ8N2R8 423 aa24.66■■□□□ 1.54
EDC4-204ENST00000572221 ARGLU1Q9NWB6 273 aaPredicted RBP24.66■■□□□ 1.54
EDC4-204ENST00000572221 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
EDC4-204ENST00000572221 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
EDC4-204ENST00000572221 CCDC39Q9UFE4 941 aa24.65■■□□□ 1.54
EDC4-204ENST00000572221 NASPP49321 788 aaPredicted RBP24.65■■□□□ 1.54
EDC4-204ENST00000572221 MNS1Q8NEH6 495 aa24.65■■□□□ 1.54
EDC4-204ENST00000572221 EPS15P42566 896 aa24.65■■□□□ 1.54
EDC4-204ENST00000572221 SETQ01105 290 aaPredicted RBP24.65■■□□□ 1.54
EDC4-204ENST00000572221 HMGB2P26583 209 aaKnown RBP24.64■■□□□ 1.54
EDC4-204ENST00000572221 KCNH5Q8NCM2 988 aa24.64■■□□□ 1.54
EDC4-204ENST00000572221 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.54
EDC4-204ENST00000572221 CT47A1Q5JQC4 288 aaPredicted RBP24.64■■□□□ 1.54
EDC4-204ENST00000572221 AEBP1Q8IUX7 1158 aa24.64■■□□□ 1.53
EDC4-204ENST00000572221 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.53
EDC4-204ENST00000572221 CCDC57Q2TAC2 916 aa24.64■■□□□ 1.53
EDC4-204ENST00000572221 RPAP2Q8IXW5 612 aaPredicted RBP24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms