RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
TRIM25-205ENST00000572021 USP6P35125 1406 aa16.64■□□□□ 0.25
TRIM25-205ENST00000572021 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
TRIM25-205ENST00000572021 CD163L1Q9NR16 1453 aa16.63■□□□□ 0.25
TRIM25-205ENST00000572021 ABCA3Q99758 1704 aa16.63■□□□□ 0.25
TRIM25-205ENST00000572021 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
TRIM25-205ENST00000572021 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
TRIM25-205ENST00000572021 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
TRIM25-205ENST00000572021 KTN1Q86UP2 1357 aaKnown RBP16.62■□□□□ 0.25
TRIM25-205ENST00000572021 HAP1P54257 671 aaPredicted RBP16.61■□□□□ 0.25
TRIM25-205ENST00000572021 PUS7Q96PZ0 661 aaKnown RBP16.61■□□□□ 0.25
TRIM25-205ENST00000572021 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
TRIM25-205ENST00000572021 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
TRIM25-205ENST00000572021 RGS17Q9UGC6 210 aaPredicted RBP16.6■□□□□ 0.25
TRIM25-205ENST00000572021 NRKQ7Z2Y5 1582 aa16.6■□□□□ 0.25
TRIM25-205ENST00000572021 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
TRIM25-205ENST00000572021 C11orf95C9JLR9 678 aaPredicted RBP16.6■□□□□ 0.25
TRIM25-205ENST00000572021 MYOM1P52179 1685 aa16.59■□□□□ 0.25
TRIM25-205ENST00000572021 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
TRIM25-205ENST00000572021 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
TRIM25-205ENST00000572021 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
TRIM25-205ENST00000572021 PIK3C2AO00443 1686 aa16.59■□□□□ 0.25
TRIM25-205ENST00000572021 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
TRIM25-205ENST00000572021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRIM25-205ENST00000572021 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
TRIM25-205ENST00000572021 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.25
TRIM25-205ENST00000572021 CDCA8Q53HL2 280 aa16.58■□□□□ 0.24
TRIM25-205ENST00000572021 NGLY1Q96IV0 654 aa16.57■□□□□ 0.24
TRIM25-205ENST00000572021 TERF2IPQ9NYB0 399 aa16.57■□□□□ 0.24
TRIM25-205ENST00000572021 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
TRIM25-205ENST00000572021 AFF2P51816 1311 aa16.57■□□□□ 0.24
TRIM25-205ENST00000572021 PHRF1Q9P1Y6 1649 aaKnown RBP16.57■□□□□ 0.24
TRIM25-205ENST00000572021 NLRP6P59044 892 aa16.55■□□□□ 0.24
TRIM25-205ENST00000572021 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
TRIM25-205ENST00000572021 POTEAQ6S8J7 498 aa16.55■□□□□ 0.24
TRIM25-205ENST00000572021 NME9Q86XW9 330 aa16.55■□□□□ 0.24
TRIM25-205ENST00000572021 BRD4O60885 1362 aaPredicted RBP16.54■□□□□ 0.24
TRIM25-205ENST00000572021 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
TRIM25-205ENST00000572021 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
TRIM25-205ENST00000572021 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
TRIM25-205ENST00000572021 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
TRIM25-205ENST00000572021 FAM83GA6ND36 823 aa16.52■□□□□ 0.24
TRIM25-205ENST00000572021 SOX12O15370 315 aa16.52■□□□□ 0.24
TRIM25-205ENST00000572021 USP19O94966 1318 aa16.52■□□□□ 0.24
TRIM25-205ENST00000572021 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.24
TRIM25-205ENST00000572021 ILDR2Q71H61 639 aa16.51■□□□□ 0.23
TRIM25-205ENST00000572021 PLCH1Q4KWH8 1693 aa16.51■□□□□ 0.23
TRIM25-205ENST00000572021 KIF7Q2M1P5 1343 aa16.51■□□□□ 0.23
TRIM25-205ENST00000572021 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
TRIM25-205ENST00000572021 USP21Q9UK80 565 aa16.51■□□□□ 0.23
TRIM25-205ENST00000572021 KIAA0232Q92628 1395 aa16.5■□□□□ 0.23
TRIM25-205ENST00000572021 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
TRIM25-205ENST00000572021 GCP02774 474 aa16.5■□□□□ 0.23
TRIM25-205ENST00000572021 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
TRIM25-205ENST00000572021 PRDM11Q9NQV5 511 aa16.49■□□□□ 0.23
TRIM25-205ENST00000572021 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
TRIM25-205ENST00000572021 FNBP4Q8N3X1 1017 aaPredicted RBP16.48■□□□□ 0.23
TRIM25-205ENST00000572021 SLIT3O75094 1523 aa16.48■□□□□ 0.23
TRIM25-205ENST00000572021 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
TRIM25-205ENST00000572021 QTRT2Q9H974 415 aaKnown RBP16.47■□□□□ 0.23
TRIM25-205ENST00000572021 NSD3Q9BZ95 1437 aa16.47■□□□□ 0.23
TRIM25-205ENST00000572021 COL14A1Q05707 1796 aaKnown RBP16.47■□□□□ 0.23
TRIM25-205ENST00000572021 SLIT2O94813 1529 aa16.47■□□□□ 0.23
TRIM25-205ENST00000572021 GGNBP2Q9H3C7 697 aa16.46■□□□□ 0.23
TRIM25-205ENST00000572021 PANK3Q9H999 370 aa16.46■□□□□ 0.23
TRIM25-205ENST00000572021 BTG4Q9NY30 223 aa16.46■□□□□ 0.23
TRIM25-205ENST00000572021 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
TRIM25-205ENST00000572021 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
TRIM25-205ENST00000572021 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
TRIM25-205ENST00000572021 CCDC7Q96M83 1385 aa16.45■□□□□ 0.22
TRIM25-205ENST00000572021 USP54Q70EL1 1684 aa16.45■□□□□ 0.22
TRIM25-205ENST00000572021 FYB1O15117 783 aa16.44■□□□□ 0.22
TRIM25-205ENST00000572021 NFAT5O94916 1531 aa16.44■□□□□ 0.22
TRIM25-205ENST00000572021 NRAPQ86VF7 1730 aa16.44■□□□□ 0.22
TRIM25-205ENST00000572021 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
TRIM25-205ENST00000572021 OVOS2A0A0J9YW53 1432 aa16.43■□□□□ 0.22
TRIM25-205ENST00000572021 OVOS2Q6IE36 1432 aa16.43■□□□□ 0.22
TRIM25-205ENST00000572021 FBLN1P23142 703 aa16.43■□□□□ 0.22
TRIM25-205ENST00000572021 UNC5CLQ8IV45 518 aa16.43■□□□□ 0.22
TRIM25-205ENST00000572021 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
TRIM25-205ENST00000572021 CPDO75976 1380 aa16.42■□□□□ 0.22
TRIM25-205ENST00000572021 ATRNO75882 1429 aa16.42■□□□□ 0.22
TRIM25-205ENST00000572021 COG3Q96JB2 828 aa16.42■□□□□ 0.22
TRIM25-205ENST00000572021 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
TRIM25-205ENST00000572021 TRPC5Q9UL62 973 aaPredicted RBP16.42■□□□□ 0.22
TRIM25-205ENST00000572021 LMO7Q8WWI1 1683 aa16.41■□□□□ 0.22
TRIM25-205ENST00000572021 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
TRIM25-205ENST00000572021 RXRBP28702 533 aa16.41■□□□□ 0.22
TRIM25-205ENST00000572021 KCNH5Q8NCM2 988 aa16.41■□□□□ 0.22
TRIM25-205ENST00000572021 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
TRIM25-205ENST00000572021 LTN1O94822 1766 aa16.4■□□□□ 0.22
TRIM25-205ENST00000572021 RGPD5Q99666 1765 aa16.4■□□□□ 0.22
TRIM25-205ENST00000572021 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
TRIM25-205ENST00000572021 COL18A1P39060 1754 aa16.39■□□□□ 0.21
TRIM25-205ENST00000572021 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
TRIM25-205ENST00000572021 AXIN2Q9Y2T1 843 aa16.38■□□□□ 0.21
TRIM25-205ENST00000572021 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
TRIM25-205ENST00000572021 GLI3P10071 1580 aa16.38■□□□□ 0.21
TRIM25-205ENST00000572021 RBM6P78332 1123 aaKnown RBP16.38■□□□□ 0.21
TRIM25-205ENST00000572021 GJD4Q96KN9 370 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms