RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
LITAF-209ENST00000571688 MAP7D2Q96T17 732 aa20.95■□□□□ 0.94
LITAF-209ENST00000571688 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.94
LITAF-209ENST00000571688 ZC3H13Q5T200 1668 aaKnown RBP20.94■□□□□ 0.94
LITAF-209ENST00000571688 ZNF445P59923 1031 aa20.94■□□□□ 0.94
LITAF-209ENST00000571688 EXOSC9Q06265 439 aaKnown RBP20.94■□□□□ 0.94
LITAF-209ENST00000571688 FOXD4L1Q9NU39 408 aa20.94■□□□□ 0.94
LITAF-209ENST00000571688 NOS1P29475 1434 aa20.94■□□□□ 0.94
LITAF-209ENST00000571688 PRDM4Q9UKN5 801 aa20.94■□□□□ 0.94
LITAF-209ENST00000571688 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
LITAF-209ENST00000571688 BAG4O95429 457 aaKnown RBP20.93■□□□□ 0.94
LITAF-209ENST00000571688 TMEM57Q8N5G2 664 aa20.93■□□□□ 0.94
LITAF-209ENST00000571688 LNPKQ9C0E8 428 aa20.93■□□□□ 0.94
LITAF-209ENST00000571688 CHD1LQ86WJ1 897 aa20.93■□□□□ 0.94
LITAF-209ENST00000571688 INO80Q9ULG1 1556 aaPredicted RBP20.93■□□□□ 0.94
LITAF-209ENST00000571688 RBM10P98175 930 aaKnown RBP20.92■□□□□ 0.94
LITAF-209ENST00000571688 GAS2L2Q8NHY3 880 aa20.92■□□□□ 0.94
LITAF-209ENST00000571688 ABCC1P33527 1531 aa20.92■□□□□ 0.94
LITAF-209ENST00000571688 ADGRF5Q8IZF2 1346 aa20.92■□□□□ 0.94
LITAF-209ENST00000571688 ZNF500O60304 480 aaPredicted RBP20.92■□□□□ 0.94
LITAF-209ENST00000571688 NOB1Q9ULX3 412 aaKnown RBP20.91■□□□□ 0.94
LITAF-209ENST00000571688 NOL7Q9UMY1 257 aaKnown RBP20.91■□□□□ 0.94
LITAF-209ENST00000571688 KIF16BQ96L93 1317 aa20.91■□□□□ 0.94
LITAF-209ENST00000571688 PDLIM2Q96JY6 352 aa20.91■□□□□ 0.94
LITAF-209ENST00000571688 ABCC11Q96J66 1382 aa20.9■□□□□ 0.94
LITAF-209ENST00000571688 AK9Q5TCS8 1911 aa20.9■□□□□ 0.94
LITAF-209ENST00000571688 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
LITAF-209ENST00000571688 R3HCC1Q9Y3T6 440 aaKnown RBP20.9■□□□□ 0.94
LITAF-209ENST00000571688 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.93
LITAF-209ENST00000571688 SLC12A5Q9H2X9 1139 aa20.89■□□□□ 0.93
LITAF-209ENST00000571688 TRAPPC8Q9Y2L5 1435 aa20.89■□□□□ 0.93
LITAF-209ENST00000571688 KIF1BO60333 1816 aa20.89■□□□□ 0.93
LITAF-209ENST00000571688 CD109Q6YHK3 1445 aa20.89■□□□□ 0.93
LITAF-209ENST00000571688 U2AF1L5P0DN76 240 aaPredicted RBP20.89■□□□□ 0.93
LITAF-209ENST00000571688 U2AF1Q01081 240 aaKnown RBP eCLIP20.89■□□□□ 0.93
LITAF-209ENST00000571688 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
LITAF-209ENST00000571688 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.89■□□□□ 0.93
LITAF-209ENST00000571688 QRICH2Q9H0J4 1663 aa20.88■□□□□ 0.93
LITAF-209ENST00000571688 SETBP1Q9Y6X0 1596 aa20.88■□□□□ 0.93
LITAF-209ENST00000571688 PLCH2O75038 1416 aa20.87■□□□□ 0.93
LITAF-209ENST00000571688 PPRC1Q5VV67 1664 aaKnown RBP20.87■□□□□ 0.93
LITAF-209ENST00000571688 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
LITAF-209ENST00000571688 FAM13BQ9NYF5 915 aa20.87■□□□□ 0.93
LITAF-209ENST00000571688 ZSCAN23Q3MJ62 389 aa20.86■□□□□ 0.93
LITAF-209ENST00000571688 REREQ9P2R6 1566 aa20.86■□□□□ 0.93
LITAF-209ENST00000571688 ZFYVE16Q7Z3T8 1539 aa20.85■□□□□ 0.93
LITAF-209ENST00000571688 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
LITAF-209ENST00000571688 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
LITAF-209ENST00000571688 IL16Q14005 1332 aa20.85■□□□□ 0.93
LITAF-209ENST00000571688 MED14O60244 1454 aa20.85■□□□□ 0.93
LITAF-209ENST00000571688 MROH2AA6NES4 1674 aa20.85■□□□□ 0.93
LITAF-209ENST00000571688 IPO8O15397 1037 aaKnown RBP20.84■□□□□ 0.93
LITAF-209ENST00000571688 RBSNQ9H1K0 784 aa20.84■□□□□ 0.93
LITAF-209ENST00000571688 UQCRHLA0A096LP55 91 aa20.84■□□□□ 0.93
LITAF-209ENST00000571688 UQCRHP07919 91 aa20.84■□□□□ 0.93
LITAF-209ENST00000571688 PLEKHF1Q96S99 279 aa20.84■□□□□ 0.93
LITAF-209ENST00000571688 LMBRD1Q9NUN5 540 aa20.84■□□□□ 0.93
LITAF-209ENST00000571688 CYP2E1P05181 493 aaPredicted RBP20.83■□□□□ 0.93
LITAF-209ENST00000571688 TMPOP42166 694 aaKnown RBP20.83■□□□□ 0.93
LITAF-209ENST00000571688 CAVIN1Q6NZI2 390 aaKnown RBP20.83■□□□□ 0.93
LITAF-209ENST00000571688 NSD2O96028 1365 aa20.83■□□□□ 0.93
LITAF-209ENST00000571688 MCTP1Q6DN14 999 aa20.82■□□□□ 0.92
LITAF-209ENST00000571688 MTERF4Q7Z6M4 381 aaKnown RBP20.82■□□□□ 0.92
LITAF-209ENST00000571688 GCC1Q96CN9 775 aa20.82■□□□□ 0.92
LITAF-209ENST00000571688 PPIP5K1Q6PFW1 1433 aa20.82■□□□□ 0.92
LITAF-209ENST00000571688 XPCQ01831 940 aaPredicted RBP20.82■□□□□ 0.92
LITAF-209ENST00000571688 EFCAB2Q5VUJ9 269 aa20.82■□□□□ 0.92
LITAF-209ENST00000571688 ZKSCAN5Q9Y2L8 839 aa20.82■□□□□ 0.92
LITAF-209ENST00000571688 NUCB2P80303 420 aa20.81■□□□□ 0.92
LITAF-209ENST00000571688 DYNC1I1O14576 645 aa20.81■□□□□ 0.92
LITAF-209ENST00000571688 ANKRD45Q5TZF3 282 aa20.81■□□□□ 0.92
LITAF-209ENST00000571688 SPAG9O60271 1321 aaKnown RBP20.8■□□□□ 0.92
LITAF-209ENST00000571688 MCM5P33992 734 aa20.8■□□□□ 0.92
LITAF-209ENST00000571688 CSPP1Q1MSJ5 1256 aa20.8■□□□□ 0.92
LITAF-209ENST00000571688 ALDH1L2Q3SY69 923 aa20.8■□□□□ 0.92
LITAF-209ENST00000571688 SMAP1Q8IYB5 467 aaPredicted RBP20.79■□□□□ 0.92
LITAF-209ENST00000571688 PRIM1P49642 420 aaKnown RBP20.78■□□□□ 0.92
LITAF-209ENST00000571688 CDC45O75419 566 aa20.78■□□□□ 0.92
LITAF-209ENST00000571688 RABEP1Q15276 862 aa20.78■□□□□ 0.92
LITAF-209ENST00000571688 COL3A1P02461 1466 aaPredicted RBP20.77■□□□□ 0.92
LITAF-209ENST00000571688 NCLP19338 710 aaKnown RBP20.77■□□□□ 0.92
LITAF-209ENST00000571688 TRAK1Q9UPV9 953 aa20.76■□□□□ 0.91
LITAF-209ENST00000571688 ANKRD36BQ8N2N9 1353 aa20.76■□□□□ 0.91
LITAF-209ENST00000571688 ZBTB7BO15156 539 aaPredicted RBP20.75■□□□□ 0.91
LITAF-209ENST00000571688 BRPF1P55201 1214 aaPredicted RBP20.75■□□□□ 0.91
LITAF-209ENST00000571688 ADGRB1O14514 1584 aa20.75■□□□□ 0.91
LITAF-209ENST00000571688 SASS6Q6UVJ0 657 aa20.75■□□□□ 0.91
LITAF-209ENST00000571688 MROH1Q8NDA8 1641 aa20.74■□□□□ 0.91
LITAF-209ENST00000571688 PIK3R4Q99570 1358 aa20.74■□□□□ 0.91
LITAF-209ENST00000571688 GPT2Q8TD30 523 aa20.74■□□□□ 0.91
LITAF-209ENST00000571688 CCDC39Q9UFE4 941 aa20.74■□□□□ 0.91
LITAF-209ENST00000571688 ADGRB3O60242 1522 aa20.73■□□□□ 0.91
LITAF-209ENST00000571688 PKP1Q13835 747 aa20.73■□□□□ 0.91
LITAF-209ENST00000571688 LRSAM1Q6UWE0 723 aa20.73■□□□□ 0.91
LITAF-209ENST00000571688 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
LITAF-209ENST00000571688 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
LITAF-209ENST00000571688 CWC22Q9HCG8 908 aaKnown RBP20.72■□□□□ 0.91
LITAF-209ENST00000571688 EFCAB6Q5THR3 1501 aa20.72■□□□□ 0.91
LITAF-209ENST00000571688 PUS7Q96PZ0 661 aaKnown RBP20.72■□□□□ 0.91
LITAF-209ENST00000571688 RBM27Q9P2N5 1060 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms