RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 TRPM3Q9HCF6 1732 aaPredicted RBP30.96■■■□□ 2.55
UBFD1-210ENST00000571064 POGKQ9P215 609 aa30.96■■■□□ 2.55
UBFD1-210ENST00000571064 ANKARQ7Z5J8 1434 aa30.96■■■□□ 2.55
UBFD1-210ENST00000571064 SPATA31A5Q5VU36 1347 aa30.96■■■□□ 2.55
UBFD1-210ENST00000571064 SPATA31A7Q8IWB4 1347 aa30.96■■■□□ 2.55
UBFD1-210ENST00000571064 COL14A1Q05707 1796 aaKnown RBP30.95■■■□□ 2.55
UBFD1-210ENST00000571064 KDM2AQ9Y2K7 1162 aa30.95■■■□□ 2.55
UBFD1-210ENST00000571064 EZH2Q15910 746 aaKnown RBP30.92■■■□□ 2.54
UBFD1-210ENST00000571064 HIRIP3Q9BW71 556 aaPredicted RBP30.92■■■□□ 2.54
UBFD1-210ENST00000571064 ALS2Q96Q42 1657 aa30.92■■■□□ 2.54
UBFD1-210ENST00000571064 GPRASP1Q5JY77 1395 aa30.91■■■□□ 2.54
UBFD1-210ENST00000571064 DISP2A7MBM2 1401 aa30.9■■■□□ 2.54
UBFD1-210ENST00000571064 TNS1Q9HBL0 1735 aaKnown RBP30.9■■■□□ 2.54
UBFD1-210ENST00000571064 THSD7AQ9UPZ6 1657 aa30.89■■■□□ 2.54
UBFD1-210ENST00000571064 PRR36Q9H6K5 1346 aa30.89■■■□□ 2.54
UBFD1-210ENST00000571064 DLC1Q96QB1 1528 aa30.88■■■□□ 2.53
UBFD1-210ENST00000571064 TONSLQ96HA7 1378 aa30.88■■■□□ 2.53
UBFD1-210ENST00000571064 ADGRB2O60241 1585 aa30.88■■■□□ 2.53
UBFD1-210ENST00000571064 STAC3Q96MF2 364 aa30.87■■■□□ 2.53
UBFD1-210ENST00000571064 PRDM11Q9NQV5 511 aa30.86■■■□□ 2.53
UBFD1-210ENST00000571064 MINK1Q8N4C8 1332 aaPredicted RBP30.85■■■□□ 2.53
UBFD1-210ENST00000571064 TRIM37O94972 964 aa30.85■■■□□ 2.53
UBFD1-210ENST00000571064 CAMKK2Q96RR4 588 aa30.84■■■□□ 2.53
UBFD1-210ENST00000571064 TRAK1Q9UPV9 953 aa30.84■■■□□ 2.53
UBFD1-210ENST00000571064 PAK3O75914 559 aaPredicted RBP30.83■■■□□ 2.53
UBFD1-210ENST00000571064 CRYBG1Q9Y4K1 1723 aa30.82■■■□□ 2.52
UBFD1-210ENST00000571064 SPATA31A1Q5TZJ5 1347 aa30.81■■■□□ 2.52
UBFD1-210ENST00000571064 NGDNQ8NEJ9 315 aaKnown RBP30.81■■■□□ 2.52
UBFD1-210ENST00000571064 FAM196AQ6ZSG2 479 aa30.79■■■□□ 2.52
UBFD1-210ENST00000571064 ADGRB1O14514 1584 aa30.79■■■□□ 2.52
UBFD1-210ENST00000571064 TULP4Q9NRJ4 1543 aa30.78■■■□□ 2.52
UBFD1-210ENST00000571064 CHRNA2Q15822 529 aa30.78■■■□□ 2.52
UBFD1-210ENST00000571064 EIF3AQ14152 1382 aaKnown RBP30.78■■■□□ 2.52
UBFD1-210ENST00000571064 KIAA0232Q92628 1395 aa30.78■■■□□ 2.52
UBFD1-210ENST00000571064 WASLO00401 505 aaPredicted RBP30.77■■■□□ 2.52
UBFD1-210ENST00000571064 APBA3O96018 575 aa30.77■■■□□ 2.52
UBFD1-210ENST00000571064 STRN4Q9NRL3 753 aa30.77■■■□□ 2.52
UBFD1-210ENST00000571064 NBPF8Q3BBV2 869 aa30.76■■■□□ 2.51
UBFD1-210ENST00000571064 TIMELESSQ9UNS1 1208 aa30.76■■■□□ 2.51
UBFD1-210ENST00000571064 USP35Q9P2H5 1018 aa30.73■■■□□ 2.51
UBFD1-210ENST00000571064 PARD3Q8TEW0 1356 aa30.71■■■□□ 2.51
UBFD1-210ENST00000571064 KIAA1210Q9ULL0 1709 aa30.71■■■□□ 2.51
UBFD1-210ENST00000571064 ZC3H6P61129 1189 aaKnown RBP30.71■■■□□ 2.51
UBFD1-210ENST00000571064 YY1P25490 414 aa30.69■■■□□ 2.5
UBFD1-210ENST00000571064 NUTM2GQ5VZR2 741 aa30.69■■■□□ 2.5
UBFD1-210ENST00000571064 TRPM1Q7Z4N2 1603 aa30.68■■■□□ 2.5
UBFD1-210ENST00000571064 NBPF1Q3BBV0 1214 aa30.67■■■□□ 2.5
UBFD1-210ENST00000571064 PHRF1Q9P1Y6 1649 aaKnown RBP30.66■■■□□ 2.5
UBFD1-210ENST00000571064 PDE3BQ13370 1112 aa30.66■■■□□ 2.5
UBFD1-210ENST00000571064 RREB1Q92766 1687 aa30.65■■■□□ 2.5
UBFD1-210ENST00000571064 NUDT16Q96DE0 195 aaKnown RBP30.65■■■□□ 2.5
UBFD1-210ENST00000571064 NUP188Q5SRE5 1749 aa30.64■■■□□ 2.5
UBFD1-210ENST00000571064 EVA1CP58658 441 aa30.64■■■□□ 2.5
UBFD1-210ENST00000571064 BARGINQ6ZT62 677 aa30.64■■■□□ 2.5
UBFD1-210ENST00000571064 ATP7BP35670 1465 aa30.63■■■□□ 2.49
UBFD1-210ENST00000571064 SSH2Q76I76 1423 aa30.63■■■□□ 2.49
UBFD1-210ENST00000571064 NBPF14Q5TI25 921 aa30.62■■■□□ 2.49
UBFD1-210ENST00000571064 LARP1Q6PKG0 1096 aaKnown RBP30.61■■■□□ 2.49
UBFD1-210ENST00000571064 ITSN1Q15811 1721 aa30.59■■■□□ 2.49
UBFD1-210ENST00000571064 CAMTA1Q9Y6Y1 1673 aa30.58■■■□□ 2.49
UBFD1-210ENST00000571064 TCP11L2Q8N4U5 519 aa30.57■■■□□ 2.48
UBFD1-210ENST00000571064 PPP1R1BQ9UD71 204 aaPredicted RBP30.57■■■□□ 2.48
UBFD1-210ENST00000571064 SPON1Q9HCB6 807 aa30.56■■■□□ 2.48
UBFD1-210ENST00000571064 ACEP12821 1306 aa30.54■■■□□ 2.48
UBFD1-210ENST00000571064 CDK19Q9BWU1 502 aa30.54■■■□□ 2.48
UBFD1-210ENST00000571064 ARHGEF28Q8N1W1 1705 aaKnown RBP30.53■■■□□ 2.48
UBFD1-210ENST00000571064 KCNQ2O43526 872 aa30.53■■■□□ 2.48
UBFD1-210ENST00000571064 POLR3AO14802 1390 aaPredicted RBP30.53■■■□□ 2.48
UBFD1-210ENST00000571064 ROCK2O75116 1388 aaKnown RBP30.53■■■□□ 2.48
UBFD1-210ENST00000571064 NRKQ7Z2Y5 1582 aa30.52■■■□□ 2.48
UBFD1-210ENST00000571064 ABTB2Q8N961 1025 aa30.51■■■□□ 2.47
UBFD1-210ENST00000571064 LMO7Q8WWI1 1683 aa30.49■■■□□ 2.47
UBFD1-210ENST00000571064 CPDO75976 1380 aa30.49■■■□□ 2.47
UBFD1-210ENST00000571064 CCDC61Q9Y6R9 512 aa30.48■■■□□ 2.47
UBFD1-210ENST00000571064 THRAP3Q9Y2W1 955 aaKnown RBP30.47■■■□□ 2.47
UBFD1-210ENST00000571064 NINLQ9Y2I6 1382 aa30.46■■■□□ 2.47
UBFD1-210ENST00000571064 DCAF8L1A6NGE4 600 aa30.46■■■□□ 2.47
UBFD1-210ENST00000571064 USP19O94966 1318 aa30.46■■■□□ 2.47
UBFD1-210ENST00000571064 TOPAZ1Q8N9V7 1692 aa30.46■■■□□ 2.47
UBFD1-210ENST00000571064 PLEKHG3A1L390 1219 aa30.45■■■□□ 2.47
UBFD1-210ENST00000571064 PARP4Q9UKK3 1724 aaKnown RBP30.44■■■□□ 2.46
UBFD1-210ENST00000571064 CARD11Q9BXL7 1154 aa30.43■■■□□ 2.46
UBFD1-210ENST00000571064 COL5A2P05997 1499 aaPredicted RBP30.43■■■□□ 2.46
UBFD1-210ENST00000571064 GCP02774 474 aa30.42■■■□□ 2.46
UBFD1-210ENST00000571064 NLRP13Q86W25 1043 aa30.4■■■□□ 2.46
UBFD1-210ENST00000571064 ANO8Q9HCE9 1232 aaPredicted RBP30.39■■■□□ 2.46
UBFD1-210ENST00000571064 PEAK1Q9H792 1746 aa30.39■■■□□ 2.45
UBFD1-210ENST00000571064 OVOS2A0A0G2JMS6 1433 aa30.39■■■□□ 2.45
UBFD1-210ENST00000571064 OVOS2A0A0J9YW53 1432 aa30.39■■■□□ 2.45
UBFD1-210ENST00000571064 OVOS2Q6IE36 1432 aa30.39■■■□□ 2.45
UBFD1-210ENST00000571064 C11orf95C9JLR9 678 aaPredicted RBP30.38■■■□□ 2.45
UBFD1-210ENST00000571064 ZBTB7CA1YPR0 619 aa30.37■■■□□ 2.45
UBFD1-210ENST00000571064 PLSCR1O15162 318 aa30.37■■■□□ 2.45
UBFD1-210ENST00000571064 PTF1AQ7RTS3 328 aa30.37■■■□□ 2.45
UBFD1-210ENST00000571064 PDGFDQ9GZP0 370 aaPredicted RBP30.37■■■□□ 2.45
UBFD1-210ENST00000571064 CRB1P82279 1406 aa30.37■■■□□ 2.45
UBFD1-210ENST00000571064 SBF2Q86WG5 1849 aa30.33■■■□□ 2.45
UBFD1-210ENST00000571064 CASZ1Q86V15 1759 aa30.33■■■□□ 2.45
UBFD1-210ENST00000571064 DDB1Q16531 1140 aa30.32■■■□□ 2.44
UBFD1-210ENST00000571064 RGPD3A6NKT7 1758 aaPredicted RBP30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms