RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
NUP88-202ENST00000570937 Q6ZNB5 142 aa8.87□□□□□ -0.99
NUP88-202ENST00000570937 BANK1Q8NDB2 785 aa8.87□□□□□ -0.99
NUP88-202ENST00000570937 ARMC2Q8NEN0 867 aa8.87□□□□□ -0.99
NUP88-202ENST00000570937 BAP1Q92560 729 aa8.87□□□□□ -0.99
NUP88-202ENST00000570937 PDZRN3Q9UPQ7 1066 aa8.87□□□□□ -0.99
NUP88-202ENST00000570937 SH3BP2P78314 561 aa8.86□□□□□ -0.99
NUP88-202ENST00000570937 ZNF511Q8NB15 262 aa8.86□□□□□ -0.99
NUP88-202ENST00000570937 NRG2O14511 850 aaPredicted RBP8.85□□□□□ -0.99
NUP88-202ENST00000570937 SOCS7O14512 581 aa8.85□□□□□ -0.99
NUP88-202ENST00000570937 FOXC1Q12948 553 aa8.84□□□□□ -0.99
NUP88-202ENST00000570937 RC3H1Q5TC82 1133 aaKnown RBP8.84□□□□□ -0.99
NUP88-202ENST00000570937 GPKOWQ92917 476 aaPredicted RBP eCLIP8.84□□□□□ -0.99
NUP88-202ENST00000570937 HMX1Q9NP08 348 aaPredicted RBP8.84□□□□□ -0.99
NUP88-202ENST00000570937 TNFRSF10AO00220 468 aa8.83□□□□□ -1
NUP88-202ENST00000570937 NR6A1Q15406 480 aa8.83□□□□□ -1
NUP88-202ENST00000570937 LINC01559Q495D7 138 aa8.83□□□□□ -1
NUP88-202ENST00000570937 NBPF14Q5TI25 921 aa8.82□□□□□ -1
NUP88-202ENST00000570937 MRGPRX2Q96LB1 330 aa8.82□□□□□ -1
NUP88-202ENST00000570937 TOR4AQ9NXH8 423 aa8.82□□□□□ -1
NUP88-202ENST00000570937 ZC3H4Q9UPT8 1303 aaKnown RBP8.81□□□□□ -1
NUP88-202ENST00000570937 GJD4Q96KN9 370 aaPredicted RBP8.81□□□□□ -1
NUP88-202ENST00000570937 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
NUP88-202ENST00000570937 FKBPLQ9UIM3 349 aa8.81□□□□□ -1
NUP88-202ENST00000570937 SIAH2O43255 324 aa8.8□□□□□ -1
NUP88-202ENST00000570937 VARSP26640 1264 aaKnown RBP8.8□□□□□ -1
NUP88-202ENST00000570937 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
NUP88-202ENST00000570937 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
NUP88-202ENST00000570937 EPS8L1Q8TE68 723 aa8.8□□□□□ -1
NUP88-202ENST00000570937 PDXDC2PQ6P474 469 aa8.79□□□□□ -1
NUP88-202ENST00000570937 SH3BP5LQ7L8J4 393 aa8.79□□□□□ -1
NUP88-202ENST00000570937 CYP4X1Q8N118 509 aa8.79□□□□□ -1
NUP88-202ENST00000570937 SNIP1Q8TAD8 396 aaKnown RBP8.79□□□□□ -1
NUP88-202ENST00000570937 TRAF7Q6Q0C0 670 aa8.78□□□□□ -1
NUP88-202ENST00000570937 BPHLQ86WA6 291 aaPredicted RBP8.78□□□□□ -1
NUP88-202ENST00000570937 MPNDQ8N594 471 aa8.78□□□□□ -1
NUP88-202ENST00000570937 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
NUP88-202ENST00000570937 PNMA1Q8ND90 353 aa8.78□□□□□ -1
NUP88-202ENST00000570937 FOXJ1Q92949 421 aa8.78□□□□□ -1
NUP88-202ENST00000570937 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
NUP88-202ENST00000570937 SNRKQ9NRH2 765 aa8.77□□□□□ -1.01
NUP88-202ENST00000570937 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1.01
NUP88-202ENST00000570937 APBB1O00213 710 aa8.76□□□□□ -1.01
NUP88-202ENST00000570937 DGAT1O75907 488 aa8.76□□□□□ -1.01
NUP88-202ENST00000570937 TTC24A2A3L6 582 aaPredicted RBP8.75□□□□□ -1.01
NUP88-202ENST00000570937 LCE2BO14633 110 aa8.75□□□□□ -1.01
NUP88-202ENST00000570937 FAM174AQ8TBP5 190 aa8.75□□□□□ -1.01
NUP88-202ENST00000570937 C1QTNF2Q9BXJ5 285 aa8.75□□□□□ -1.01
NUP88-202ENST00000570937 AGERQ15109 404 aa8.74□□□□□ -1.01
NUP88-202ENST00000570937 AVPP01185 164 aa8.73□□□□□ -1.01
NUP88-202ENST00000570937 SMPD1P17405 629 aa8.73□□□□□ -1.01
NUP88-202ENST00000570937 PTK2Q05397 1052 aa8.73□□□□□ -1.01
NUP88-202ENST00000570937 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
NUP88-202ENST00000570937 CDK15Q96Q40 435 aa8.73□□□□□ -1.01
NUP88-202ENST00000570937 FAM187AA6NFU0 413 aa8.72□□□□□ -1.01
NUP88-202ENST00000570937 J3QL48 77 aa8.72□□□□□ -1.01
NUP88-202ENST00000570937 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
NUP88-202ENST00000570937 OCSTAMPQ9BR26 566 aa8.72□□□□□ -1.01
NUP88-202ENST00000570937 ARHGAP9Q9BRR9 750 aa8.72□□□□□ -1.01
NUP88-202ENST00000570937 NDUFB9Q9Y6M9 179 aa8.72□□□□□ -1.01
NUP88-202ENST00000570937 GPR37L1O60883 481 aa8.71□□□□□ -1.02
NUP88-202ENST00000570937 ALDH1A1P00352 501 aa8.71□□□□□ -1.02
NUP88-202ENST00000570937 MCM6Q14566 821 aa8.71□□□□□ -1.02
NUP88-202ENST00000570937 TLL2Q9Y6L7 1015 aa8.71□□□□□ -1.02
NUP88-202ENST00000570937 ERFEQ4G0M1 354 aa8.7□□□□□ -1.02
NUP88-202ENST00000570937 MAP4K5Q9Y4K4 846 aa8.7□□□□□ -1.02
NUP88-202ENST00000570937 MAGEB6P1A0A0J9YX57 407 aa8.69□□□□□ -1.02
NUP88-202ENST00000570937 CRIPAKQ8N1N5 446 aa8.69□□□□□ -1.02
NUP88-202ENST00000570937 ADH1CP00326 375 aa8.68□□□□□ -1.02
NUP88-202ENST00000570937 MYT1Q01538 1121 aa8.68□□□□□ -1.02
NUP88-202ENST00000570937 ZBTB33Q86T24 672 aa8.68□□□□□ -1.02
NUP88-202ENST00000570937 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
NUP88-202ENST00000570937 PRM3Q9NNZ6 103 aa8.68□□□□□ -1.02
NUP88-202ENST00000570937 ZBBXA8MT70 800 aa8.67□□□□□ -1.02
NUP88-202ENST00000570937 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
NUP88-202ENST00000570937 FLIIQ13045 1269 aa8.67□□□□□ -1.02
NUP88-202ENST00000570937 CTC1Q2NKJ3 1217 aa8.67□□□□□ -1.02
NUP88-202ENST00000570937 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
NUP88-202ENST00000570937 CDV3Q9UKY7 258 aaKnown RBP8.67□□□□□ -1.02
NUP88-202ENST00000570937 WASF2Q9Y6W5 498 aa8.67□□□□□ -1.02
NUP88-202ENST00000570937 NISCHQ9Y2I1 1504 aa8.66□□□□□ -1.02
NUP88-202ENST00000570937 GRM5P41594 1212 aa8.66□□□□□ -1.02
NUP88-202ENST00000570937 HPS1Q92902 700 aa8.66□□□□□ -1.02
NUP88-202ENST00000570937 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
NUP88-202ENST00000570937 FBXO45P0C2W1 286 aa8.65□□□□□ -1.02
NUP88-202ENST00000570937 NR5A1Q13285 461 aa8.65□□□□□ -1.02
NUP88-202ENST00000570937 NR1H3Q13133 447 aa8.64□□□□□ -1.03
NUP88-202ENST00000570937 ARID5BQ14865 1188 aa8.64□□□□□ -1.03
NUP88-202ENST00000570937 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
NUP88-202ENST00000570937 NNTQ13423 1086 aa8.63□□□□□ -1.03
NUP88-202ENST00000570937 VASH1Q7L8A9 365 aaPredicted RBP8.63□□□□□ -1.03
NUP88-202ENST00000570937 AAASQ9NRG9 546 aa8.63□□□□□ -1.03
NUP88-202ENST00000570937 IRF5Q13568 498 aa8.62□□□□□ -1.03
NUP88-202ENST00000570937 GDPD2Q9HCC8 539 aa8.62□□□□□ -1.03
NUP88-202ENST00000570937 AXIN1O15169 862 aa8.61□□□□□ -1.03
NUP88-202ENST00000570937 NR3C2P08235 984 aa8.61□□□□□ -1.03
NUP88-202ENST00000570937 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
NUP88-202ENST00000570937 KCTD15Q96SI1 283 aaPredicted RBP8.61□□□□□ -1.03
NUP88-202ENST00000570937 KLF16Q9BXK1 252 aaPredicted RBP8.61□□□□□ -1.03
NUP88-202ENST00000570937 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms