RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 FAM83GA6ND36 823 aa7.74□□□□□ -1.17
CHD3-212ENST00000570758 SRPK2P78362 688 aaKnown RBP7.74□□□□□ -1.17
CHD3-212ENST00000570758 UNC5CLQ8IV45 518 aa7.74□□□□□ -1.17
CHD3-212ENST00000570758 UPF1Q92900 1129 aaKnown RBP eCLIP7.74□□□□□ -1.17
CHD3-212ENST00000570758 PPIP5K1Q6PFW1 1433 aa7.74□□□□□ -1.17
CHD3-212ENST00000570758 RALGAPBQ86X10 1494 aa7.74□□□□□ -1.17
CHD3-212ENST00000570758 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.73□□□□□ -1.17
CHD3-212ENST00000570758 CRYBG1Q9Y4K1 1723 aa7.73□□□□□ -1.17
CHD3-212ENST00000570758 NUTM2GQ5VZR2 741 aa7.73□□□□□ -1.17
CHD3-212ENST00000570758 GJD4Q96KN9 370 aaPredicted RBP7.73□□□□□ -1.17
CHD3-212ENST00000570758 EVC2Q86UK5 1308 aa7.73□□□□□ -1.17
CHD3-212ENST00000570758 PLCH1Q4KWH8 1693 aa7.73□□□□□ -1.17
CHD3-212ENST00000570758 GLI3P10071 1580 aa7.72□□□□□ -1.17
CHD3-212ENST00000570758 CARD11Q9BXL7 1154 aa7.72□□□□□ -1.17
CHD3-212ENST00000570758 CABP1Q9NZU7 370 aa7.72□□□□□ -1.17
CHD3-212ENST00000570758 VPS72Q15906 364 aa7.71□□□□□ -1.18
CHD3-212ENST00000570758 NWD2Q9ULI1 1742 aa7.71□□□□□ -1.18
CHD3-212ENST00000570758 PHRF1Q9P1Y6 1649 aaKnown RBP7.7□□□□□ -1.18
CHD3-212ENST00000570758 USP6P35125 1406 aa7.7□□□□□ -1.18
CHD3-212ENST00000570758 NRAPQ86VF7 1730 aa7.7□□□□□ -1.18
CHD3-212ENST00000570758 CHRNA2Q15822 529 aa7.7□□□□□ -1.18
CHD3-212ENST00000570758 PRDM11Q9NQV5 511 aa7.7□□□□□ -1.18
CHD3-212ENST00000570758 BTG4Q9NY30 223 aa7.7□□□□□ -1.18
CHD3-212ENST00000570758 USP19O94966 1318 aa7.7□□□□□ -1.18
CHD3-212ENST00000570758 KIAA0232Q92628 1395 aa7.7□□□□□ -1.18
CHD3-212ENST00000570758 SSH2Q76I76 1423 aa7.69□□□□□ -1.18
CHD3-212ENST00000570758 COL14A1Q05707 1796 aaKnown RBP7.69□□□□□ -1.18
CHD3-212ENST00000570758 NRKQ7Z2Y5 1582 aa7.69□□□□□ -1.18
CHD3-212ENST00000570758 ZC3H6P61129 1189 aaKnown RBP7.69□□□□□ -1.18
CHD3-212ENST00000570758 ABTB2Q8N961 1025 aa7.69□□□□□ -1.18
CHD3-212ENST00000570758 PCGF6Q9BYE7 350 aa7.69□□□□□ -1.18
CHD3-212ENST00000570758 CCDC9Q9Y3X0 531 aaKnown RBP7.69□□□□□ -1.18
CHD3-212ENST00000570758 ATAD2Q6PL18 1390 aa7.69□□□□□ -1.18
CHD3-212ENST00000570758 SBNO2Q9Y2G9 1366 aa7.69□□□□□ -1.18
CHD3-212ENST00000570758 SEPT12Q8IYM1 358 aa7.68□□□□□ -1.18
CHD3-212ENST00000570758 BRD4O60885 1362 aaPredicted RBP7.68□□□□□ -1.18
CHD3-212ENST00000570758 ONECUT3O60422 494 aaPredicted RBP7.67□□□□□ -1.18
CHD3-212ENST00000570758 GCP02774 474 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 NLRP6P59044 892 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 NLRP13Q86W25 1043 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 SPATA31A5Q5VU36 1347 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 TTC21BQ7Z4L5 1316 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 SPATA31A7Q8IWB4 1347 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 CPDO75976 1380 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 CPSF1Q10570 1443 aaKnown RBP7.67□□□□□ -1.18
CHD3-212ENST00000570758 PIK3C2AO00443 1686 aa7.67□□□□□ -1.18
CHD3-212ENST00000570758 AKAP12Q02952 1782 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 BRWD3Q6RI45 1802 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 ST20-MTHFSA0A0A6YYL1 179 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 FAM98CQ17RN3 349 aaKnown RBP7.66□□□□□ -1.18
CHD3-212ENST00000570758 TESK2Q96S53 571 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 STRN4Q9NRL3 753 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 CD163L1Q9NR16 1453 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 SLIT3O75094 1523 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 LMO7Q8WWI1 1683 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 CAMTA1Q9Y6Y1 1673 aa7.66□□□□□ -1.18
CHD3-212ENST00000570758 KTN1Q86UP2 1357 aaKnown RBP7.65□□□□□ -1.18
CHD3-212ENST00000570758 TMC1Q8TDI8 760 aa7.65□□□□□ -1.18
CHD3-212ENST00000570758 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.18
CHD3-212ENST00000570758 SLC12A5Q9H2X9 1139 aa7.65□□□□□ -1.18
CHD3-212ENST00000570758 ZRANB1Q9UGI0 708 aa7.65□□□□□ -1.18
CHD3-212ENST00000570758 SPATA31A1Q5TZJ5 1347 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 TTC21AQ8NDW8 1320 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 CLSPNQ9HAW4 1339 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 A0A0G2JS52 829 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 EVA1CP58658 441 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 MYT1Q01538 1121 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 LARP1Q6PKG0 1096 aaKnown RBP7.64□□□□□ -1.19
CHD3-212ENST00000570758 KRT27Q7Z3Y8 459 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 MON2Q7Z3U7 1717 aa7.64□□□□□ -1.19
CHD3-212ENST00000570758 AATKQ6ZMQ8 1374 aa7.63□□□□□ -1.19
CHD3-212ENST00000570758 USP47Q96K76 1375 aa7.63□□□□□ -1.19
CHD3-212ENST00000570758 SOX12O15370 315 aa7.63□□□□□ -1.19
CHD3-212ENST00000570758 NME9Q86XW9 330 aa7.63□□□□□ -1.19
CHD3-212ENST00000570758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.63□□□□□ -1.19
CHD3-212ENST00000570758 PUS7Q96PZ0 661 aaKnown RBP7.63□□□□□ -1.19
CHD3-212ENST00000570758 THSD7AQ9UPZ6 1657 aa7.63□□□□□ -1.19
CHD3-212ENST00000570758 COL5A2P05997 1499 aaPredicted RBP7.62□□□□□ -1.19
CHD3-212ENST00000570758 A0A1W2PP64 1363 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 USP31Q70CQ4 1352 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 COL18A1P39060 1754 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 FAM182BQ5T319 152 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 HDGFL2Q7Z4V5 671 aaPredicted RBP7.62□□□□□ -1.19
CHD3-212ENST00000570758 ARHGEF25Q86VW2 580 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 USP35Q9P2H5 1018 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 TIMELESSQ9UNS1 1208 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 AXIN2Q9Y2T1 843 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 NFAT5O94916 1531 aa7.62□□□□□ -1.19
CHD3-212ENST00000570758 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
CHD3-212ENST00000570758 BARGINQ6ZT62 677 aa7.61□□□□□ -1.19
CHD3-212ENST00000570758 DEFB132Q7Z7B7 95 aa7.61□□□□□ -1.19
CHD3-212ENST00000570758 CCDC125Q86Z20 511 aa7.61□□□□□ -1.19
CHD3-212ENST00000570758 CCER1Q8TC90 406 aaPredicted RBP7.61□□□□□ -1.19
CHD3-212ENST00000570758 EDC4Q6P2E9 1401 aaKnown RBP7.61□□□□□ -1.19
CHD3-212ENST00000570758 TMF1P82094 1093 aa7.6□□□□□ -1.19
CHD3-212ENST00000570758 TCP11L2Q8N4U5 519 aa7.6□□□□□ -1.19
CHD3-212ENST00000570758 KCNH5Q8NCM2 988 aa7.6□□□□□ -1.19
CHD3-212ENST00000570758 TERF2IPQ9NYB0 399 aa7.6□□□□□ -1.19
CHD3-212ENST00000570758 USP54Q70EL1 1684 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms