RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CFAP70Q5T0N1 1121 aa19.26■□□□□ 0.67
SMG6-207ENST00000570756 ITPRIPQ8IWB1 547 aa19.26■□□□□ 0.67
SMG6-207ENST00000570756 RICTORQ6R327 1708 aa19.26■□□□□ 0.67
SMG6-207ENST00000570756 FRMPD1Q5SYB0 1578 aa19.26■□□□□ 0.67
SMG6-207ENST00000570756 PPP1R9BQ96SB3 815 aa19.26■□□□□ 0.67
SMG6-207ENST00000570756 TNNT2P45379 298 aaPredicted RBP19.25■□□□□ 0.67
SMG6-207ENST00000570756 ZSCAN30Q86W11 494 aa19.25■□□□□ 0.67
SMG6-207ENST00000570756 USP32Q8NFA0 1604 aa19.25■□□□□ 0.67
SMG6-207ENST00000570756 TRIM27P14373 513 aa19.25■□□□□ 0.67
SMG6-207ENST00000570756 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
SMG6-207ENST00000570756 NASPP49321 788 aaPredicted RBP19.24■□□□□ 0.67
SMG6-207ENST00000570756 KIAA1211Q6ZU35 1233 aa19.24■□□□□ 0.67
SMG6-207ENST00000570756 ZFYVE16Q7Z3T8 1539 aa19.24■□□□□ 0.67
SMG6-207ENST00000570756 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
SMG6-207ENST00000570756 MTHFSP49914 203 aa19.23■□□□□ 0.67
SMG6-207ENST00000570756 DEPDC5O75140 1603 aa19.23■□□□□ 0.67
SMG6-207ENST00000570756 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
SMG6-207ENST00000570756 TERF1P54274 439 aa19.23■□□□□ 0.67
SMG6-207ENST00000570756 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.23■□□□□ 0.67
SMG6-207ENST00000570756 KIDINS220Q9ULH0 1771 aa19.22■□□□□ 0.67
SMG6-207ENST00000570756 ATP7AQ04656 1500 aa19.22■□□□□ 0.67
SMG6-207ENST00000570756 MSNP26038 577 aaKnown RBP19.22■□□□□ 0.67
SMG6-207ENST00000570756 NUCB1Q02818 461 aa19.22■□□□□ 0.67
SMG6-207ENST00000570756 YEATS2Q9ULM3 1422 aa19.22■□□□□ 0.67
SMG6-207ENST00000570756 OFD1O75665 1012 aa19.21■□□□□ 0.67
SMG6-207ENST00000570756 BMP2KLQ5H9B9 411 aa19.21■□□□□ 0.67
SMG6-207ENST00000570756 KIF16BQ96L93 1317 aa19.21■□□□□ 0.66
SMG6-207ENST00000570756 INO80Q9ULG1 1556 aaPredicted RBP19.2■□□□□ 0.66
SMG6-207ENST00000570756 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
SMG6-207ENST00000570756 U2AF1L5P0DN76 240 aaPredicted RBP19.2■□□□□ 0.66
SMG6-207ENST00000570756 U2AF1Q01081 240 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMG6-207ENST00000570756 KLHL40Q2TBA0 621 aa19.2■□□□□ 0.66
SMG6-207ENST00000570756 CLEC17AQ6ZS10 378 aa19.2■□□□□ 0.66
SMG6-207ENST00000570756 ZBTB40Q9NUA8 1239 aa19.2■□□□□ 0.66
SMG6-207ENST00000570756 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
SMG6-207ENST00000570756 IPO8O15397 1037 aaKnown RBP19.19■□□□□ 0.66
SMG6-207ENST00000570756 EXOSC9Q06265 439 aaKnown RBP19.19■□□□□ 0.66
SMG6-207ENST00000570756 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
SMG6-207ENST00000570756 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
SMG6-207ENST00000570756 TSR2Q969E8 191 aaKnown RBP19.18■□□□□ 0.66
SMG6-207ENST00000570756 HECW2Q9P2P5 1572 aa19.18■□□□□ 0.66
SMG6-207ENST00000570756 KIF1BO60333 1816 aa19.18■□□□□ 0.66
SMG6-207ENST00000570756 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
SMG6-207ENST00000570756 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
SMG6-207ENST00000570756 NSD2O96028 1365 aa19.17■□□□□ 0.66
SMG6-207ENST00000570756 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
SMG6-207ENST00000570756 SETBP1Q9Y6X0 1596 aa19.17■□□□□ 0.66
SMG6-207ENST00000570756 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
SMG6-207ENST00000570756 MAP7D2Q96T17 732 aa19.16■□□□□ 0.66
SMG6-207ENST00000570756 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
SMG6-207ENST00000570756 SLC12A5Q9H2X9 1139 aa19.16■□□□□ 0.66
SMG6-207ENST00000570756 NOB1Q9ULX3 412 aaKnown RBP19.16■□□□□ 0.66
SMG6-207ENST00000570756 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
SMG6-207ENST00000570756 KIF2CQ99661 725 aa19.16■□□□□ 0.66
SMG6-207ENST00000570756 NRXN1Q9ULB1 1477 aa19.16■□□□□ 0.66
SMG6-207ENST00000570756 IL16Q14005 1332 aa19.15■□□□□ 0.66
SMG6-207ENST00000570756 VWDEQ8N2E2 1590 aa19.15■□□□□ 0.66
SMG6-207ENST00000570756 ZC3H13Q5T200 1668 aaKnown RBP19.15■□□□□ 0.66
SMG6-207ENST00000570756 NOS1P29475 1434 aa19.14■□□□□ 0.65
SMG6-207ENST00000570756 MLH3Q9UHC1 1453 aa19.14■□□□□ 0.65
SMG6-207ENST00000570756 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.65
SMG6-207ENST00000570756 QRICH2Q9H0J4 1663 aa19.13■□□□□ 0.65
SMG6-207ENST00000570756 SSFA2P28290 1259 aa19.13■□□□□ 0.65
SMG6-207ENST00000570756 CALD1Q05682 793 aaKnown RBP19.13■□□□□ 0.65
SMG6-207ENST00000570756 ZNF445P59923 1031 aa19.13■□□□□ 0.65
SMG6-207ENST00000570756 BAG4O95429 457 aaKnown RBP19.12■□□□□ 0.65
SMG6-207ENST00000570756 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
SMG6-207ENST00000570756 FOXD4L1Q9NU39 408 aa19.12■□□□□ 0.65
SMG6-207ENST00000570756 GCC1Q96CN9 775 aa19.12■□□□□ 0.65
SMG6-207ENST00000570756 DIP2CQ9Y2E4 1556 aa19.11■□□□□ 0.65
SMG6-207ENST00000570756 CD2BP2O95400 341 aaKnown RBP19.11■□□□□ 0.65
SMG6-207ENST00000570756 REREQ9P2R6 1566 aa19.11■□□□□ 0.65
SMG6-207ENST00000570756 KIF3BO15066 747 aa19.1■□□□□ 0.65
SMG6-207ENST00000570756 TMPOP42166 694 aaKnown RBP19.1■□□□□ 0.65
SMG6-207ENST00000570756 ALDH1L2Q3SY69 923 aa19.1■□□□□ 0.65
SMG6-207ENST00000570756 NUCB2P80303 420 aa19.09■□□□□ 0.65
SMG6-207ENST00000570756 TBC1D9Q6ZT07 1266 aa19.09■□□□□ 0.65
SMG6-207ENST00000570756 GAS2L2Q8NHY3 880 aa19.09■□□□□ 0.65
SMG6-207ENST00000570756 UGGT1Q9NYU2 1555 aa19.09■□□□□ 0.65
SMG6-207ENST00000570756 CFAP44Q96MT7 982 aa19.09■□□□□ 0.65
SMG6-207ENST00000570756 NOL7Q9UMY1 257 aaKnown RBP19.09■□□□□ 0.65
SMG6-207ENST00000570756 SIGLEC1Q9BZZ2 1709 aa19.08■□□□□ 0.65
SMG6-207ENST00000570756 TRIM35Q9UPQ4 493 aa19.08■□□□□ 0.64
SMG6-207ENST00000570756 ZNF500O60304 480 aaPredicted RBP19.08■□□□□ 0.64
SMG6-207ENST00000570756 ANKRD45Q5TZF3 282 aa19.08■□□□□ 0.64
SMG6-207ENST00000570756 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.64
SMG6-207ENST00000570756 TRAK1Q9UPV9 953 aa19.08■□□□□ 0.64
SMG6-207ENST00000570756 ANKRD36BQ8N2N9 1353 aa19.07■□□□□ 0.64
SMG6-207ENST00000570756 RIPK4P57078 832 aa19.07■□□□□ 0.64
SMG6-207ENST00000570756 PLEKHF1Q96S99 279 aa19.07■□□□□ 0.64
SMG6-207ENST00000570756 MED14O60244 1454 aa19.07■□□□□ 0.64
SMG6-207ENST00000570756 MTERF4Q7Z6M4 381 aaKnown RBP19.06■□□□□ 0.64
SMG6-207ENST00000570756 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
SMG6-207ENST00000570756 CDC45O75419 566 aa19.05■□□□□ 0.64
SMG6-207ENST00000570756 RABEP1Q15276 862 aa19.05■□□□□ 0.64
SMG6-207ENST00000570756 CSPP1Q1MSJ5 1256 aa19.05■□□□□ 0.64
SMG6-207ENST00000570756 GGT6Q6P531 493 aa19.05■□□□□ 0.64
SMG6-207ENST00000570756 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
SMG6-207ENST00000570756 U2SURPO15042 1029 aaKnown RBP19.05■□□□□ 0.64
SMG6-207ENST00000570756 MLECQ14165 292 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms