RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 CCER2I3L3R5 266 aa24.59■■□□□ 1.53
SPNS2-202ENST00000570641 ORAI2Q96SN7 254 aa24.59■■□□□ 1.53
SPNS2-202ENST00000570641 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.52
SPNS2-202ENST00000570641 SSH2Q76I76 1423 aa24.56■■□□□ 1.52
SPNS2-202ENST00000570641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.56■■□□□ 1.52
SPNS2-202ENST00000570641 TTC21BQ7Z4L5 1316 aa24.56■■□□□ 1.52
SPNS2-202ENST00000570641 TTC21AQ8NDW8 1320 aa24.56■■□□□ 1.52
SPNS2-202ENST00000570641 MYBBP1AQ9BQG0 1328 aaKnown RBP24.56■■□□□ 1.52
SPNS2-202ENST00000570641 FYB1O15117 783 aa24.54■■□□□ 1.52
SPNS2-202ENST00000570641 MORC1Q86VD1 984 aa24.54■■□□□ 1.52
SPNS2-202ENST00000570641 SLAIN2Q9P270 581 aa24.54■■□□□ 1.52
SPNS2-202ENST00000570641 PSME1Q06323 249 aa24.53■■□□□ 1.52
SPNS2-202ENST00000570641 GGNBP2Q9H3C7 697 aa24.52■■□□□ 1.52
SPNS2-202ENST00000570641 FOXO3O43524 673 aa24.49■■□□□ 1.51
SPNS2-202ENST00000570641 NME9Q86XW9 330 aa24.49■■□□□ 1.51
SPNS2-202ENST00000570641 BRINP3Q76B58 766 aa24.48■■□□□ 1.51
SPNS2-202ENST00000570641 NPHP3Q7Z494 1330 aa24.48■■□□□ 1.51
SPNS2-202ENST00000570641 NLRP13Q86W25 1043 aa24.48■■□□□ 1.51
SPNS2-202ENST00000570641 TRPM3Q9HCF6 1732 aaPredicted RBP24.48■■□□□ 1.51
SPNS2-202ENST00000570641 PIK3C2AO00443 1686 aa24.47■■□□□ 1.51
SPNS2-202ENST00000570641 USP54Q70EL1 1684 aa24.47■■□□□ 1.51
SPNS2-202ENST00000570641 COG3Q96JB2 828 aa24.47■■□□□ 1.51
SPNS2-202ENST00000570641 PPP2R1AP30153 589 aa24.46■■□□□ 1.51
SPNS2-202ENST00000570641 KRT28Q7Z3Y7 464 aa24.46■■□□□ 1.51
SPNS2-202ENST00000570641 USP31Q70CQ4 1352 aa24.45■■□□□ 1.5
SPNS2-202ENST00000570641 PAK3O75914 559 aaPredicted RBP24.45■■□□□ 1.5
SPNS2-202ENST00000570641 OVOS2A0A0J9YW53 1432 aa24.44■■□□□ 1.5
SPNS2-202ENST00000570641 OVOS2Q6IE36 1432 aa24.44■■□□□ 1.5
SPNS2-202ENST00000570641 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
SPNS2-202ENST00000570641 MRS2Q9HD23 443 aa24.43■■□□□ 1.5
SPNS2-202ENST00000570641 NHSL1Q5SYE7 1610 aa24.43■■□□□ 1.5
SPNS2-202ENST00000570641 ZRANB1Q9UGI0 708 aa24.42■■□□□ 1.5
SPNS2-202ENST00000570641 PXDNQ92626 1479 aa24.41■■□□□ 1.5
SPNS2-202ENST00000570641 ABTB2Q8N961 1025 aa24.41■■□□□ 1.5
SPNS2-202ENST00000570641 SBNO1A3KN83 1393 aa24.41■■□□□ 1.5
SPNS2-202ENST00000570641 ALS2Q96Q42 1657 aa24.4■■□□□ 1.5
SPNS2-202ENST00000570641 ROBO1Q9Y6N7 1651 aa24.4■■□□□ 1.5
SPNS2-202ENST00000570641 UBAP1LF5GYI3 381 aa24.4■■□□□ 1.5
SPNS2-202ENST00000570641 TOM1O60784 492 aa24.4■■□□□ 1.5
SPNS2-202ENST00000570641 TNNT2P45379 298 aaPredicted RBP24.4■■□□□ 1.5
SPNS2-202ENST00000570641 XPCQ01831 940 aaPredicted RBP24.4■■□□□ 1.5
SPNS2-202ENST00000570641 MARF1Q9Y4F3 1742 aaKnown RBP24.4■■□□□ 1.5
SPNS2-202ENST00000570641 MAP2P11137 1827 aaKnown RBP24.4■■□□□ 1.5
SPNS2-202ENST00000570641 NLRP6P59044 892 aa24.39■■□□□ 1.49
SPNS2-202ENST00000570641 CCDC184Q52MB2 194 aa24.38■■□□□ 1.49
SPNS2-202ENST00000570641 AATKQ6ZMQ8 1374 aa24.37■■□□□ 1.49
SPNS2-202ENST00000570641 DDX17Q92841 729 aaKnown RBP24.36■■□□□ 1.49
SPNS2-202ENST00000570641 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
SPNS2-202ENST00000570641 AHDC1Q5TGY3 1603 aaPredicted RBP24.34■■□□□ 1.49
SPNS2-202ENST00000570641 SOS2Q07890 1332 aaPredicted RBP24.34■■□□□ 1.49
SPNS2-202ENST00000570641 MTHFSP49914 203 aa24.32■■□□□ 1.48
SPNS2-202ENST00000570641 NUTM2GQ5VZR2 741 aa24.32■■□□□ 1.48
SPNS2-202ENST00000570641 LMOD2Q6P5Q4 547 aa24.32■■□□□ 1.48
SPNS2-202ENST00000570641 CFAP53Q96M91 514 aa24.32■■□□□ 1.48
SPNS2-202ENST00000570641 SPATA31A3Q5VYP0 1347 aa24.32■■□□□ 1.48
SPNS2-202ENST00000570641 ARHGEF10O15013 1369 aa24.31■■□□□ 1.48
SPNS2-202ENST00000570641 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
SPNS2-202ENST00000570641 SLIT3O75094 1523 aa24.3■■□□□ 1.48
SPNS2-202ENST00000570641 KCNH5Q8NCM2 988 aa24.28■■□□□ 1.48
SPNS2-202ENST00000570641 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
SPNS2-202ENST00000570641 USP19O94966 1318 aa24.28■■□□□ 1.48
SPNS2-202ENST00000570641 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
SPNS2-202ENST00000570641 MED1Q15648 1581 aaPredicted RBP24.27■■□□□ 1.48
SPNS2-202ENST00000570641 PHLPP1O60346 1717 aa24.27■■□□□ 1.48
SPNS2-202ENST00000570641 CDK12Q9NYV4 1490 aaPredicted RBP24.26■■□□□ 1.47
SPNS2-202ENST00000570641 PHRF1Q9P1Y6 1649 aaKnown RBP24.25■■□□□ 1.47
SPNS2-202ENST00000570641 NFAT5O94916 1531 aa24.25■■□□□ 1.47
SPNS2-202ENST00000570641 CRYBG1Q9Y4K1 1723 aa24.24■■□□□ 1.47
SPNS2-202ENST00000570641 LTN1O94822 1766 aa24.24■■□□□ 1.47
SPNS2-202ENST00000570641 SOX12O15370 315 aa24.24■■□□□ 1.47
SPNS2-202ENST00000570641 FBLN1P23142 703 aa24.24■■□□□ 1.47
SPNS2-202ENST00000570641 PIP4K2BP78356 416 aa24.24■■□□□ 1.47
SPNS2-202ENST00000570641 FAM9BQ8IZU0 186 aa24.24■■□□□ 1.47
SPNS2-202ENST00000570641 RRS1Q15050 365 aaKnown RBP24.23■■□□□ 1.47
SPNS2-202ENST00000570641 EMILIN1Q9Y6C2 1016 aa24.23■■□□□ 1.47
SPNS2-202ENST00000570641 INSRP06213 1382 aa24.23■■□□□ 1.47
SPNS2-202ENST00000570641 SHPRHQ149N8 1683 aa24.22■■□□□ 1.47
SPNS2-202ENST00000570641 KIF24Q5T7B8 1368 aa24.22■■□□□ 1.47
SPNS2-202ENST00000570641 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
SPNS2-202ENST00000570641 PPM1GO15355 546 aaPredicted RBP24.22■■□□□ 1.47
SPNS2-202ENST00000570641 WDR43Q15061 677 aaKnown RBP eCLIP24.22■■□□□ 1.47
SPNS2-202ENST00000570641 COL3A1P02461 1466 aaPredicted RBP24.21■■□□□ 1.47
SPNS2-202ENST00000570641 GCP02774 474 aa24.21■■□□□ 1.47
SPNS2-202ENST00000570641 HSPA1LP34931 641 aa24.21■■□□□ 1.47
SPNS2-202ENST00000570641 LRRC59Q96AG4 307 aaKnown RBP24.21■■□□□ 1.47
SPNS2-202ENST00000570641 PEAK1Q9H792 1746 aa24.21■■□□□ 1.47
SPNS2-202ENST00000570641 MAP3K19Q56UN5 1328 aa24.2■■□□□ 1.46
SPNS2-202ENST00000570641 COL16A1Q07092 1604 aaPredicted RBP24.2■■□□□ 1.46
SPNS2-202ENST00000570641 FLT4P35916 1363 aa24.18■■□□□ 1.46
SPNS2-202ENST00000570641 AMPHP49418 695 aa24.18■■□□□ 1.46
SPNS2-202ENST00000570641 NUDCQ9Y266 331 aa24.18■■□□□ 1.46
SPNS2-202ENST00000570641 ABCA3Q99758 1704 aa24.18■■□□□ 1.46
SPNS2-202ENST00000570641 RTL1A6NKG5 1358 aa24.17■■□□□ 1.46
SPNS2-202ENST00000570641 DIAPH1O60610 1272 aaKnown RBP24.17■■□□□ 1.46
SPNS2-202ENST00000570641 PLEKHG5O94827 1062 aa24.16■■□□□ 1.46
SPNS2-202ENST00000570641 COL22A1Q8NFW1 1626 aaPredicted RBP24.16■■□□□ 1.46
SPNS2-202ENST00000570641 ARHGEF25Q86VW2 580 aa24.13■■□□□ 1.45
SPNS2-202ENST00000570641 YTHDC1Q96MU7 727 aaKnown RBP24.13■■□□□ 1.45
SPNS2-202ENST00000570641 CABLES1Q8TDN4 633 aa24.12■■□□□ 1.45
SPNS2-202ENST00000570641 HOXC9P31274 260 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms