RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 CENPJQ9HC77 1338 aaPredicted RBP30.3■■■□□ 2.44
RPA1-202ENST00000570451 BTG4Q9NY30 223 aa30.29■■■□□ 2.44
RPA1-202ENST00000570451 SRPK2P78362 688 aaKnown RBP30.28■■■□□ 2.44
RPA1-202ENST00000570451 CCDC61Q9Y6R9 512 aa30.28■■■□□ 2.44
RPA1-202ENST00000570451 ACEP12821 1306 aa30.27■■■□□ 2.44
RPA1-202ENST00000570451 TOPAZ1Q8N9V7 1692 aa30.27■■■□□ 2.44
RPA1-202ENST00000570451 SEPT12Q8IYM1 358 aa30.27■■■□□ 2.44
RPA1-202ENST00000570451 NUTM2GQ5VZR2 741 aa30.25■■■□□ 2.43
RPA1-202ENST00000570451 COL14A1Q05707 1796 aaKnown RBP30.25■■■□□ 2.43
RPA1-202ENST00000570451 A0A0G2JS52 829 aa30.24■■■□□ 2.43
RPA1-202ENST00000570451 MYT1Q01538 1121 aa30.24■■■□□ 2.43
RPA1-202ENST00000570451 NBPF8Q3BBV2 869 aa30.24■■■□□ 2.43
RPA1-202ENST00000570451 POLR3AO14802 1390 aaPredicted RBP30.24■■■□□ 2.43
RPA1-202ENST00000570451 CRYBG1Q9Y4K1 1723 aa30.23■■■□□ 2.43
RPA1-202ENST00000570451 CABP2Q9NPB3 220 aa30.23■■■□□ 2.43
RPA1-202ENST00000570451 PRDM11Q9NQV5 511 aa30.23■■■□□ 2.43
RPA1-202ENST00000570451 NRAPQ86VF7 1730 aa30.22■■■□□ 2.43
RPA1-202ENST00000570451 PLEKHG3A1L390 1219 aa30.22■■■□□ 2.43
RPA1-202ENST00000570451 QRICH2Q9H0J4 1663 aa30.22■■■□□ 2.43
RPA1-202ENST00000570451 BRWD3Q6RI45 1802 aa30.22■■■□□ 2.43
RPA1-202ENST00000570451 CCDC125Q86Z20 511 aa30.2■■■□□ 2.43
RPA1-202ENST00000570451 PPIP5K1Q6PFW1 1433 aa30.2■■■□□ 2.42
RPA1-202ENST00000570451 FAM98CQ17RN3 349 aaKnown RBP30.18■■■□□ 2.42
RPA1-202ENST00000570451 TRPM1Q7Z4N2 1603 aa30.18■■■□□ 2.42
RPA1-202ENST00000570451 ROCK2O75116 1388 aaKnown RBP30.17■■■□□ 2.42
RPA1-202ENST00000570451 KIAA0232Q92628 1395 aa30.17■■■□□ 2.42
RPA1-202ENST00000570451 ONECUT3O60422 494 aaPredicted RBP30.17■■■□□ 2.42
RPA1-202ENST00000570451 PHRF1Q9P1Y6 1649 aaKnown RBP30.16■■■□□ 2.42
RPA1-202ENST00000570451 ZC3H6P61129 1189 aaKnown RBP30.16■■■□□ 2.42
RPA1-202ENST00000570451 ABTB2Q8N961 1025 aa30.16■■■□□ 2.42
RPA1-202ENST00000570451 CHRNA2Q15822 529 aa30.15■■■□□ 2.42
RPA1-202ENST00000570451 KRT27Q7Z3Y8 459 aa30.15■■■□□ 2.42
RPA1-202ENST00000570451 BLMP54132 1417 aaPredicted RBP30.13■■■□□ 2.41
RPA1-202ENST00000570451 SPATA31A5Q5VU36 1347 aa30.11■■■□□ 2.41
RPA1-202ENST00000570451 SPATA31A7Q8IWB4 1347 aa30.11■■■□□ 2.41
RPA1-202ENST00000570451 STRN4Q9NRL3 753 aa30.1■■■□□ 2.41
RPA1-202ENST00000570451 CABP1Q9NZU7 370 aa30.1■■■□□ 2.41
RPA1-202ENST00000570451 EVC2Q86UK5 1308 aa30.1■■■□□ 2.41
RPA1-202ENST00000570451 SRCAPQ6ZRS2 3230 aa30.09■■■□□ 2.41
RPA1-202ENST00000570451 SF3B2Q13435 895 aaKnown RBP30.09■■■□□ 2.41
RPA1-202ENST00000570451 ZRANB1Q9UGI0 708 aa30.08■■■□□ 2.41
RPA1-202ENST00000570451 NRKQ7Z2Y5 1582 aa30.07■■■□□ 2.4
RPA1-202ENST00000570451 NLRP13Q86W25 1043 aa30.05■■■□□ 2.4
RPA1-202ENST00000570451 USP19O94966 1318 aa30.04■■■□□ 2.4
RPA1-202ENST00000570451 DEFB132Q7Z7B7 95 aa30.04■■■□□ 2.4
RPA1-202ENST00000570451 EVA1CP58658 441 aa30.03■■■□□ 2.4
RPA1-202ENST00000570451 USP6P35125 1406 aa30.03■■■□□ 2.4
RPA1-202ENST00000570451 SPATA31A1Q5TZJ5 1347 aa30.02■■■□□ 2.4
RPA1-202ENST00000570451 BRD4O60885 1362 aaPredicted RBP30.02■■■□□ 2.4
RPA1-202ENST00000570451 ZBTB7CA1YPR0 619 aa30■■■□□ 2.39
RPA1-202ENST00000570451 GCP02774 474 aa30■■■□□ 2.39
RPA1-202ENST00000570451 FAM182BQ5T319 152 aa30■■■□□ 2.39
RPA1-202ENST00000570451 USP35Q9P2H5 1018 aa30■■■□□ 2.39
RPA1-202ENST00000570451 NLRP6P59044 892 aa29.99■■■□□ 2.39
RPA1-202ENST00000570451 CPDO75976 1380 aa29.99■■■□□ 2.39
RPA1-202ENST00000570451 TONSLQ96HA7 1378 aa29.99■■■□□ 2.39
RPA1-202ENST00000570451 THSD7AQ9UPZ6 1657 aa29.98■■■□□ 2.39
RPA1-202ENST00000570451 SSH2Q76I76 1423 aa29.97■■■□□ 2.39
RPA1-202ENST00000570451 CARD11Q9BXL7 1154 aa29.97■■■□□ 2.39
RPA1-202ENST00000570451 CAMTA1Q9Y6Y1 1673 aa29.95■■■□□ 2.39
RPA1-202ENST00000570451 LARP1Q6PKG0 1096 aaKnown RBP29.94■■■□□ 2.38
RPA1-202ENST00000570451 LMO7Q8WWI1 1683 aa29.92■■■□□ 2.38
RPA1-202ENST00000570451 BAG6P46379 1132 aa29.91■■■□□ 2.38
RPA1-202ENST00000570451 TRIM26Q12899 539 aaPredicted RBP29.91■■■□□ 2.38
RPA1-202ENST00000570451 ZNF692Q9BU19 519 aaPredicted RBP29.9■■■□□ 2.38
RPA1-202ENST00000570451 PIK3C2AO00443 1686 aa29.9■■■□□ 2.38
RPA1-202ENST00000570451 SLIT3O75094 1523 aa29.88■■■□□ 2.37
RPA1-202ENST00000570451 TCP11L2Q8N4U5 519 aa29.88■■■□□ 2.37
RPA1-202ENST00000570451 TTC21BQ7Z4L5 1316 aa29.88■■■□□ 2.37
RPA1-202ENST00000570451 BARGINQ6ZT62 677 aa29.87■■■□□ 2.37
RPA1-202ENST00000570451 RGPD1P0DJD0 1748 aa29.86■■■□□ 2.37
RPA1-202ENST00000570451 AKAP12Q02952 1782 aa29.86■■■□□ 2.37
RPA1-202ENST00000570451 KTN1Q86UP2 1357 aaKnown RBP29.86■■■□□ 2.37
RPA1-202ENST00000570451 COL5A2P05997 1499 aaPredicted RBP29.86■■■□□ 2.37
RPA1-202ENST00000570451 SOX12O15370 315 aa29.85■■■□□ 2.37
RPA1-202ENST00000570451 SBNO2Q9Y2G9 1366 aa29.85■■■□□ 2.37
RPA1-202ENST00000570451 PDE3BQ13370 1112 aa29.84■■■□□ 2.37
RPA1-202ENST00000570451 AATKQ6ZMQ8 1374 aa29.83■■■□□ 2.37
RPA1-202ENST00000570451 CPSF1Q10570 1443 aaKnown RBP29.82■■■□□ 2.36
RPA1-202ENST00000570451 TTC21AQ8NDW8 1320 aa29.82■■■□□ 2.36
RPA1-202ENST00000570451 EN1Q05925 392 aaPredicted RBP29.82■■■□□ 2.36
RPA1-202ENST00000570451 FAM196AQ6ZSG2 479 aa29.82■■■□□ 2.36
RPA1-202ENST00000570451 TMC1Q8TDI8 760 aa29.81■■■□□ 2.36
RPA1-202ENST00000570451 THRAP3Q9Y2W1 955 aaKnown RBP29.81■■■□□ 2.36
RPA1-202ENST00000570451 CRB1P82279 1406 aa29.8■■■□□ 2.36
RPA1-202ENST00000570451 TRIM37O94972 964 aa29.8■■■□□ 2.36
RPA1-202ENST00000570451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.79■■■□□ 2.36
RPA1-202ENST00000570451 KCNH5Q8NCM2 988 aa29.79■■■□□ 2.36
RPA1-202ENST00000570451 TNS1Q9HBL0 1735 aaKnown RBP29.77■■■□□ 2.36
RPA1-202ENST00000570451 TOM1L2Q6ZVM7 507 aa29.77■■■□□ 2.36
RPA1-202ENST00000570451 MON2Q7Z3U7 1717 aa29.75■■■□□ 2.35
RPA1-202ENST00000570451 AXIN2Q9Y2T1 843 aa29.75■■■□□ 2.35
RPA1-202ENST00000570451 PSDA5PKW4 1024 aaPredicted RBP29.74■■■□□ 2.35
RPA1-202ENST00000570451 HDGFL2Q7Z4V5 671 aaPredicted RBP29.74■■■□□ 2.35
RPA1-202ENST00000570451 ARHGEF25Q86VW2 580 aa29.74■■■□□ 2.35
RPA1-202ENST00000570451 COL18A1P39060 1754 aa29.73■■■□□ 2.35
RPA1-202ENST00000570451 DISP2A7MBM2 1401 aa29.72■■■□□ 2.35
RPA1-202ENST00000570451 APBA3O96018 575 aa29.72■■■□□ 2.35
RPA1-202ENST00000570451 SLC12A5Q9H2X9 1139 aa29.72■■■□□ 2.35
RPA1-202ENST00000570451 EZH2Q15910 746 aaKnown RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms