RNA–Protein interactions for RNA: ENST00000570360.1

ITGAE-202, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-202ENST00000570360 ZNF692Q9BU19 519 aaPredicted RBP23.51■■□□□ 1.35
ITGAE-202ENST00000570360 NPHP3Q7Z494 1330 aa23.51■■□□□ 1.35
ITGAE-202ENST00000570360 PER1O15534 1290 aaPredicted RBP23.5■■□□□ 1.35
ITGAE-202ENST00000570360 BRD4O60885 1362 aaPredicted RBP23.49■■□□□ 1.35
ITGAE-202ENST00000570360 PIP4K2BP78356 416 aa23.48■■□□□ 1.35
ITGAE-202ENST00000570360 XPCQ01831 940 aaPredicted RBP23.47■■□□□ 1.35
ITGAE-202ENST00000570360 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
ITGAE-202ENST00000570360 PSME1Q06323 249 aa23.46■■□□□ 1.35
ITGAE-202ENST00000570360 SOS2Q07890 1332 aaPredicted RBP23.46■■□□□ 1.35
ITGAE-202ENST00000570360 TTC21BQ7Z4L5 1316 aa23.46■■□□□ 1.35
ITGAE-202ENST00000570360 SBNO1A3KN83 1393 aa23.45■■□□□ 1.34
ITGAE-202ENST00000570360 KRT28Q7Z3Y7 464 aa23.45■■□□□ 1.34
ITGAE-202ENST00000570360 TNS3Q68CZ2 1445 aa23.43■■□□□ 1.34
ITGAE-202ENST00000570360 TTC21AQ8NDW8 1320 aa23.43■■□□□ 1.34
ITGAE-202ENST00000570360 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
ITGAE-202ENST00000570360 ABCA3Q99758 1704 aa23.43■■□□□ 1.34
ITGAE-202ENST00000570360 AMER1Q5JTC6 1135 aaPredicted RBP23.43■■□□□ 1.34
ITGAE-202ENST00000570360 KNSTRNQ9Y448 316 aa23.43■■□□□ 1.34
ITGAE-202ENST00000570360 NPC1L1Q9UHC9 1359 aa23.42■■□□□ 1.34
ITGAE-202ENST00000570360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.34
ITGAE-202ENST00000570360 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
ITGAE-202ENST00000570360 MED1Q15648 1581 aaPredicted RBP23.41■■□□□ 1.34
ITGAE-202ENST00000570360 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
ITGAE-202ENST00000570360 NME9Q86XW9 330 aa23.4■■□□□ 1.34
ITGAE-202ENST00000570360 OVOS2A0A0J9YW53 1432 aa23.4■■□□□ 1.34
ITGAE-202ENST00000570360 OVOS2Q6IE36 1432 aa23.4■■□□□ 1.34
ITGAE-202ENST00000570360 COL22A1Q8NFW1 1626 aaPredicted RBP23.4■■□□□ 1.34
ITGAE-202ENST00000570360 NSD2O96028 1365 aa23.4■■□□□ 1.34
ITGAE-202ENST00000570360 SPATA31A3Q5VYP0 1347 aa23.38■■□□□ 1.33
ITGAE-202ENST00000570360 FYB1O15117 783 aa23.38■■□□□ 1.33
ITGAE-202ENST00000570360 USP31Q70CQ4 1352 aa23.38■■□□□ 1.33
ITGAE-202ENST00000570360 SHPRHQ149N8 1683 aa23.38■■□□□ 1.33
ITGAE-202ENST00000570360 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
ITGAE-202ENST00000570360 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
ITGAE-202ENST00000570360 SLIT3O75094 1523 aa23.35■■□□□ 1.33
ITGAE-202ENST00000570360 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
ITGAE-202ENST00000570360 ARHGEF10O15013 1369 aa23.34■■□□□ 1.33
ITGAE-202ENST00000570360 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
ITGAE-202ENST00000570360 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.32
ITGAE-202ENST00000570360 PARD3Q8TEW0 1356 aa23.32■■□□□ 1.32
ITGAE-202ENST00000570360 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
ITGAE-202ENST00000570360 ABTB2Q8N961 1025 aa23.32■■□□□ 1.32
ITGAE-202ENST00000570360 LTN1O94822 1766 aa23.32■■□□□ 1.32
ITGAE-202ENST00000570360 NFAT5O94916 1531 aa23.31■■□□□ 1.32
ITGAE-202ENST00000570360 USP19O94966 1318 aa23.31■■□□□ 1.32
ITGAE-202ENST00000570360 PNPLA6Q8IY17 1366 aa23.3■■□□□ 1.32
ITGAE-202ENST00000570360 NUTM2GQ5VZR2 741 aa23.3■■□□□ 1.32
ITGAE-202ENST00000570360 LRRC59Q96AG4 307 aaKnown RBP23.29■■□□□ 1.32
ITGAE-202ENST00000570360 NLRP6P59044 892 aa23.28■■□□□ 1.32
ITGAE-202ENST00000570360 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
ITGAE-202ENST00000570360 LMOD2Q6P5Q4 547 aa23.28■■□□□ 1.32
ITGAE-202ENST00000570360 HSPA1LP34931 641 aa23.27■■□□□ 1.32
ITGAE-202ENST00000570360 COG3Q96JB2 828 aa23.27■■□□□ 1.32
ITGAE-202ENST00000570360 NLRP13Q86W25 1043 aa23.26■■□□□ 1.31
ITGAE-202ENST00000570360 FBXO41Q8TF61 875 aa23.25■■□□□ 1.31
ITGAE-202ENST00000570360 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
ITGAE-202ENST00000570360 MORC1Q86VD1 984 aa23.24■■□□□ 1.31
ITGAE-202ENST00000570360 PEAK1Q9H792 1746 aa23.24■■□□□ 1.31
ITGAE-202ENST00000570360 JCADQ9P266 1359 aa23.22■■□□□ 1.31
ITGAE-202ENST00000570360 RALBP1Q15311 655 aa23.21■■□□□ 1.31
ITGAE-202ENST00000570360 AATKQ6ZMQ8 1374 aa23.21■■□□□ 1.31
ITGAE-202ENST00000570360 COL18A1P39060 1754 aa23.2■■□□□ 1.3
ITGAE-202ENST00000570360 RGPD5Q99666 1765 aa23.2■■□□□ 1.3
ITGAE-202ENST00000570360 SMG6Q86US8 1419 aaKnown RBP23.2■■□□□ 1.3
ITGAE-202ENST00000570360 ANP32CO43423 234 aa23.2■■□□□ 1.3
ITGAE-202ENST00000570360 CABLES1Q8TDN4 633 aa23.2■■□□□ 1.3
ITGAE-202ENST00000570360 PLEKHG5O94827 1062 aa23.18■■□□□ 1.3
ITGAE-202ENST00000570360 FBLN1P23142 703 aa23.18■■□□□ 1.3
ITGAE-202ENST00000570360 TNNT2P45379 298 aaPredicted RBP23.18■■□□□ 1.3
ITGAE-202ENST00000570360 GCP02774 474 aa23.17■■□□□ 1.3
ITGAE-202ENST00000570360 LMO7Q8WWI1 1683 aa23.16■■□□□ 1.3
ITGAE-202ENST00000570360 SOX12O15370 315 aa23.16■■□□□ 1.3
ITGAE-202ENST00000570360 PPP2R1AP30153 589 aa23.16■■□□□ 1.3
ITGAE-202ENST00000570360 KCNH5Q8NCM2 988 aa23.16■■□□□ 1.3
ITGAE-202ENST00000570360 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
ITGAE-202ENST00000570360 ABCC6O95255 1503 aa23.14■■□□□ 1.3
ITGAE-202ENST00000570360 PLCH1Q4KWH8 1693 aa23.14■■□□□ 1.29
ITGAE-202ENST00000570360 CDK12Q9NYV4 1490 aaPredicted RBP23.14■■□□□ 1.29
ITGAE-202ENST00000570360 LRP6O75581 1613 aa23.14■■□□□ 1.29
ITGAE-202ENST00000570360 CPDO75976 1380 aa23.14■■□□□ 1.29
ITGAE-202ENST00000570360 MAP3K19Q56UN5 1328 aa23.13■■□□□ 1.29
ITGAE-202ENST00000570360 RRS1Q15050 365 aaKnown RBP23.13■■□□□ 1.29
ITGAE-202ENST00000570360 COL14A1Q05707 1796 aaKnown RBP23.13■■□□□ 1.29
ITGAE-202ENST00000570360 POLKQ9UBT6 870 aa23.12■■□□□ 1.29
ITGAE-202ENST00000570360 EMILIN1Q9Y6C2 1016 aa23.12■■□□□ 1.29
ITGAE-202ENST00000570360 COL3A1P02461 1466 aaPredicted RBP23.11■■□□□ 1.29
ITGAE-202ENST00000570360 KIAA0232Q92628 1395 aa23.11■■□□□ 1.29
ITGAE-202ENST00000570360 SPATA31A6Q5VVP1 1343 aa23.1■■□□□ 1.29
ITGAE-202ENST00000570360 ARHGEF25Q86VW2 580 aa23.1■■□□□ 1.29
ITGAE-202ENST00000570360 MIER1Q8N108 512 aa23.1■■□□□ 1.29
ITGAE-202ENST00000570360 RTL1A6NKG5 1358 aa23.1■■□□□ 1.29
ITGAE-202ENST00000570360 KIF24Q5T7B8 1368 aa23.09■■□□□ 1.29
ITGAE-202ENST00000570360 MTHFSP49914 203 aa23.08■■□□□ 1.29
ITGAE-202ENST00000570360 HAP1P54257 671 aaPredicted RBP23.08■■□□□ 1.29
ITGAE-202ENST00000570360 ZC3H6P61129 1189 aaKnown RBP23.08■■□□□ 1.29
ITGAE-202ENST00000570360 NRAPQ86VF7 1730 aa23.08■■□□□ 1.28
ITGAE-202ENST00000570360 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.28
ITGAE-202ENST00000570360 RGPD2P0DJD1 1756 aa23.07■■□□□ 1.28
ITGAE-202ENST00000570360 FLT4P35916 1363 aa23.07■■□□□ 1.28
ITGAE-202ENST00000570360 INSRP06213 1382 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms