RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
HERPUD1-219ENST00000570273 RALBP1Q15311 655 aa20.98■□□□□ 0.95
HERPUD1-219ENST00000570273 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
HERPUD1-219ENST00000570273 SSH2Q76I76 1423 aa20.97■□□□□ 0.95
HERPUD1-219ENST00000570273 BRINP3Q76B58 766 aa20.96■□□□□ 0.95
HERPUD1-219ENST00000570273 BRD4O60885 1362 aaPredicted RBP20.96■□□□□ 0.95
HERPUD1-219ENST00000570273 FOXO3O43524 673 aa20.95■□□□□ 0.95
HERPUD1-219ENST00000570273 PSME1Q06323 249 aa20.95■□□□□ 0.95
HERPUD1-219ENST00000570273 TTC21AQ8NDW8 1320 aa20.95■□□□□ 0.94
HERPUD1-219ENST00000570273 NME9Q86XW9 330 aa20.95■□□□□ 0.94
HERPUD1-219ENST00000570273 GGNBP2Q9H3C7 697 aa20.95■□□□□ 0.94
HERPUD1-219ENST00000570273 ROBO1Q9Y6N7 1651 aa20.94■□□□□ 0.94
HERPUD1-219ENST00000570273 FYB1O15117 783 aa20.94■□□□□ 0.94
HERPUD1-219ENST00000570273 MORC1Q86VD1 984 aa20.94■□□□□ 0.94
HERPUD1-219ENST00000570273 NPHP3Q7Z494 1330 aa20.93■□□□□ 0.94
HERPUD1-219ENST00000570273 XPCQ01831 940 aaPredicted RBP20.93■□□□□ 0.94
HERPUD1-219ENST00000570273 MYBBP1AQ9BQG0 1328 aaKnown RBP20.92■□□□□ 0.94
HERPUD1-219ENST00000570273 PAK3O75914 559 aaPredicted RBP20.92■□□□□ 0.94
HERPUD1-219ENST00000570273 ANKRD26Q9UPS8 1709 aa20.92■□□□□ 0.94
HERPUD1-219ENST00000570273 KRT28Q7Z3Y7 464 aa20.91■□□□□ 0.94
HERPUD1-219ENST00000570273 PIP4K2BP78356 416 aa20.89■□□□□ 0.94
HERPUD1-219ENST00000570273 DDX17Q92841 729 aaKnown RBP20.89■□□□□ 0.94
HERPUD1-219ENST00000570273 COG3Q96JB2 828 aa20.89■□□□□ 0.94
HERPUD1-219ENST00000570273 PIK3C2AO00443 1686 aa20.89■□□□□ 0.93
HERPUD1-219ENST00000570273 TRPM3Q9HCF6 1732 aaPredicted RBP20.88■□□□□ 0.93
HERPUD1-219ENST00000570273 CCER2I3L3R5 266 aa20.88■□□□□ 0.93
HERPUD1-219ENST00000570273 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
HERPUD1-219ENST00000570273 PXDNQ92626 1479 aa20.88■□□□□ 0.93
HERPUD1-219ENST00000570273 OVOS2A0A0J9YW53 1432 aa20.88■□□□□ 0.93
HERPUD1-219ENST00000570273 OVOS2Q6IE36 1432 aa20.88■□□□□ 0.93
HERPUD1-219ENST00000570273 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
HERPUD1-219ENST00000570273 SBNO1A3KN83 1393 aa20.86■□□□□ 0.93
HERPUD1-219ENST00000570273 USP31Q70CQ4 1352 aa20.86■□□□□ 0.93
HERPUD1-219ENST00000570273 PPP2R1AP30153 589 aa20.86■□□□□ 0.93
HERPUD1-219ENST00000570273 ABTB2Q8N961 1025 aa20.86■□□□□ 0.93
HERPUD1-219ENST00000570273 NHSL1Q5SYE7 1610 aa20.85■□□□□ 0.93
HERPUD1-219ENST00000570273 NLRP13Q86W25 1043 aa20.85■□□□□ 0.93
HERPUD1-219ENST00000570273 NUTM2GQ5VZR2 741 aa20.84■□□□□ 0.93
HERPUD1-219ENST00000570273 TNS3Q68CZ2 1445 aa20.84■□□□□ 0.93
HERPUD1-219ENST00000570273 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
HERPUD1-219ENST00000570273 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
HERPUD1-219ENST00000570273 NLRP6P59044 892 aa20.83■□□□□ 0.93
HERPUD1-219ENST00000570273 LMOD2Q6P5Q4 547 aa20.83■□□□□ 0.93
HERPUD1-219ENST00000570273 USP54Q70EL1 1684 aa20.82■□□□□ 0.92
HERPUD1-219ENST00000570273 MRS2Q9HD23 443 aa20.81■□□□□ 0.92
HERPUD1-219ENST00000570273 SOS2Q07890 1332 aaPredicted RBP20.81■□□□□ 0.92
HERPUD1-219ENST00000570273 ALS2Q96Q42 1657 aa20.81■□□□□ 0.92
HERPUD1-219ENST00000570273 HSPA1LP34931 641 aa20.8■□□□□ 0.92
HERPUD1-219ENST00000570273 COL16A1Q07092 1604 aaPredicted RBP20.79■□□□□ 0.92
HERPUD1-219ENST00000570273 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
HERPUD1-219ENST00000570273 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
HERPUD1-219ENST00000570273 PHLPP1O60346 1717 aa20.79■□□□□ 0.92
HERPUD1-219ENST00000570273 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
HERPUD1-219ENST00000570273 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
HERPUD1-219ENST00000570273 MARF1Q9Y4F3 1742 aaKnown RBP20.78■□□□□ 0.92
HERPUD1-219ENST00000570273 SOX12O15370 315 aa20.78■□□□□ 0.92
HERPUD1-219ENST00000570273 USP19O94966 1318 aa20.75■□□□□ 0.91
HERPUD1-219ENST00000570273 SLIT3O75094 1523 aa20.74■□□□□ 0.91
HERPUD1-219ENST00000570273 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
HERPUD1-219ENST00000570273 FBLN1P23142 703 aa20.74■□□□□ 0.91
HERPUD1-219ENST00000570273 MTHFSP49914 203 aa20.74■□□□□ 0.91
HERPUD1-219ENST00000570273 MED1Q15648 1581 aaPredicted RBP20.74■□□□□ 0.91
HERPUD1-219ENST00000570273 SMG6Q86US8 1419 aaKnown RBP20.73■□□□□ 0.91
HERPUD1-219ENST00000570273 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
HERPUD1-219ENST00000570273 CFAP53Q96M91 514 aa20.72■□□□□ 0.91
HERPUD1-219ENST00000570273 POLKQ9UBT6 870 aa20.72■□□□□ 0.91
HERPUD1-219ENST00000570273 EMILIN1Q9Y6C2 1016 aa20.72■□□□□ 0.91
HERPUD1-219ENST00000570273 NFAT5O94916 1531 aa20.71■□□□□ 0.91
HERPUD1-219ENST00000570273 KCNH5Q8NCM2 988 aa20.71■□□□□ 0.91
HERPUD1-219ENST00000570273 CDK12Q9NYV4 1490 aaPredicted RBP20.7■□□□□ 0.9
HERPUD1-219ENST00000570273 PPM1GO15355 546 aaPredicted RBP20.7■□□□□ 0.9
HERPUD1-219ENST00000570273 LRRC59Q96AG4 307 aaKnown RBP20.7■□□□□ 0.9
HERPUD1-219ENST00000570273 PHRF1Q9P1Y6 1649 aaKnown RBP20.69■□□□□ 0.9
HERPUD1-219ENST00000570273 GCP02774 474 aa20.69■□□□□ 0.9
HERPUD1-219ENST00000570273 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
HERPUD1-219ENST00000570273 SHPRHQ149N8 1683 aa20.68■□□□□ 0.9
HERPUD1-219ENST00000570273 COL3A1P02461 1466 aaPredicted RBP20.67■□□□□ 0.9
HERPUD1-219ENST00000570273 MAP2P11137 1827 aaKnown RBP20.67■□□□□ 0.9
HERPUD1-219ENST00000570273 CRYBG1Q9Y4K1 1723 aa20.66■□□□□ 0.9
HERPUD1-219ENST00000570273 CABLES1Q8TDN4 633 aa20.66■□□□□ 0.9
HERPUD1-219ENST00000570273 PEAK1Q9H792 1746 aa20.65■□□□□ 0.9
HERPUD1-219ENST00000570273 ZBTB7CA1YPR0 619 aa20.65■□□□□ 0.9
HERPUD1-219ENST00000570273 AMPHP49418 695 aa20.65■□□□□ 0.9
HERPUD1-219ENST00000570273 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
HERPUD1-219ENST00000570273 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
HERPUD1-219ENST00000570273 FLT4P35916 1363 aa20.65■□□□□ 0.9
HERPUD1-219ENST00000570273 PNPLA6Q8IY17 1366 aa20.65■□□□□ 0.9
HERPUD1-219ENST00000570273 RTL1A6NKG5 1358 aa20.64■□□□□ 0.9
HERPUD1-219ENST00000570273 INSRP06213 1382 aa20.64■□□□□ 0.9
HERPUD1-219ENST00000570273 HAP1P54257 671 aaPredicted RBP20.64■□□□□ 0.89
HERPUD1-219ENST00000570273 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.89
HERPUD1-219ENST00000570273 KIF24Q5T7B8 1368 aa20.63■□□□□ 0.89
HERPUD1-219ENST00000570273 ABCA3Q99758 1704 aa20.63■□□□□ 0.89
HERPUD1-219ENST00000570273 COL22A1Q8NFW1 1626 aaPredicted RBP20.62■□□□□ 0.89
HERPUD1-219ENST00000570273 LTN1O94822 1766 aa20.62■□□□□ 0.89
HERPUD1-219ENST00000570273 JCADQ9P266 1359 aa20.62■□□□□ 0.89
HERPUD1-219ENST00000570273 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
HERPUD1-219ENST00000570273 ZC3H6P61129 1189 aaKnown RBP20.61■□□□□ 0.89
HERPUD1-219ENST00000570273 ARHGEF25Q86VW2 580 aa20.61■□□□□ 0.89
HERPUD1-219ENST00000570273 HOXC9P31274 260 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms