RNA–Protein interactions for RNA: ENST00000570199.1

EPB42-209, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-209ENST00000570199 PLEKHG3A1L390 1219 aa6.96□□□□□ -1.3
EPB42-209ENST00000570199 VARSP26640 1264 aaKnown RBP6.96□□□□□ -1.3
EPB42-209ENST00000570199 C6orf118Q5T5N4 469 aa6.96□□□□□ -1.3
EPB42-209ENST00000570199 EVA1BQ9NVM1 165 aa6.96□□□□□ -1.3
EPB42-209ENST00000570199 MAN1A2O60476 641 aa6.95□□□□□ -1.3
EPB42-209ENST00000570199 MAP2K5Q13163 448 aa6.95□□□□□ -1.3
EPB42-209ENST00000570199 PTPRNQ16849 979 aa6.95□□□□□ -1.3
EPB42-209ENST00000570199 KCNH2Q12809 1159 aa6.94□□□□□ -1.3
EPB42-209ENST00000570199 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
EPB42-209ENST00000570199 CNTNAP3BQ96NU0 1288 aa6.94□□□□□ -1.3
EPB42-209ENST00000570199 CNTNAP3Q9BZ76 1288 aa6.94□□□□□ -1.3
EPB42-209ENST00000570199 DNMT3LQ9UJW3 386 aa6.94□□□□□ -1.3
EPB42-209ENST00000570199 C6orf229H3BNL8 230 aa6.93□□□□□ -1.3
EPB42-209ENST00000570199 ZIC2O95409 532 aaPredicted RBP6.93□□□□□ -1.3
EPB42-209ENST00000570199 NR3C2P08235 984 aa6.93□□□□□ -1.3
EPB42-209ENST00000570199 FDX1P10109 184 aa6.93□□□□□ -1.3
EPB42-209ENST00000570199 FAM217BQ9NTX9 383 aaPredicted RBP6.93□□□□□ -1.3
EPB42-209ENST00000570199 IRF6O14896 467 aa6.92□□□□□ -1.3
EPB42-209ENST00000570199 SLC24A1O60721 1099 aa6.92□□□□□ -1.3
EPB42-209ENST00000570199 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
EPB42-209ENST00000570199 GPAT2Q6NUI2 795 aa6.92□□□□□ -1.3
EPB42-209ENST00000570199 RNF225M0QZC1 329 aaPredicted RBP6.91□□□□□ -1.3
EPB42-209ENST00000570199 CDK15Q96Q40 435 aa6.91□□□□□ -1.3
EPB42-209ENST00000570199 SOS2Q07890 1332 aaPredicted RBP6.91□□□□□ -1.3
EPB42-209ENST00000570199 RNFT1Q5M7Z0 435 aa6.9□□□□□ -1.3
EPB42-209ENST00000570199 XP32Q5T750 250 aa6.9□□□□□ -1.3
EPB42-209ENST00000570199 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
EPB42-209ENST00000570199 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
EPB42-209ENST00000570199 WHAMMQ8TF30 809 aa6.9□□□□□ -1.3
EPB42-209ENST00000570199 FOXJ1Q92949 421 aa6.9□□□□□ -1.3
EPB42-209ENST00000570199 DNMT3AQ9Y6K1 912 aaPredicted RBP6.9□□□□□ -1.3
EPB42-209ENST00000570199 BMP2P12643 396 aa6.89□□□□□ -1.31
EPB42-209ENST00000570199 C4orf48Q5BLP8 95 aa6.89□□□□□ -1.31
EPB42-209ENST00000570199 NUTM1Q86Y26 1132 aa6.89□□□□□ -1.31
EPB42-209ENST00000570199 GPCPD1Q9NPB8 672 aa6.89□□□□□ -1.31
EPB42-209ENST00000570199 IRS1P35568 1242 aa6.88□□□□□ -1.31
EPB42-209ENST00000570199 PRR7Q8TB68 274 aa6.88□□□□□ -1.31
EPB42-209ENST00000570199 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
EPB42-209ENST00000570199 CCDC102AQ96A19 550 aa6.88□□□□□ -1.31
EPB42-209ENST00000570199 COL25A1Q9BXS0 654 aaPredicted RBP6.88□□□□□ -1.31
EPB42-209ENST00000570199 ARHGEF15O94989 841 aa6.87□□□□□ -1.31
EPB42-209ENST00000570199 NDUFV2P19404 249 aa6.87□□□□□ -1.31
EPB42-209ENST00000570199 GRM5P41594 1212 aa6.87□□□□□ -1.31
EPB42-209ENST00000570199 ARID5BQ14865 1188 aa6.87□□□□□ -1.31
EPB42-209ENST00000570199 SVOPQ8N4V2 548 aa6.86□□□□□ -1.31
EPB42-209ENST00000570199 SPIRE2Q8WWL2 714 aa6.86□□□□□ -1.31
EPB42-209ENST00000570199 MOXD2PA6NHM9 499 aa6.85□□□□□ -1.31
EPB42-209ENST00000570199 CLCN1P35523 988 aa6.85□□□□□ -1.31
EPB42-209ENST00000570199 PTSQ03393 145 aa6.85□□□□□ -1.31
EPB42-209ENST00000570199 NR5A1Q13285 461 aa6.85□□□□□ -1.31
EPB42-209ENST00000570199 DESI1Q6ICB0 168 aa6.85□□□□□ -1.31
EPB42-209ENST00000570199 MINK1Q8N4C8 1332 aaPredicted RBP6.84□□□□□ -1.31
EPB42-209ENST00000570199 IGHA1P01876 353 aa6.84□□□□□ -1.31
EPB42-209ENST00000570199 SLURP2P0DP57 97 aa6.84□□□□□ -1.31
EPB42-209ENST00000570199 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.31
EPB42-209ENST00000570199 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
EPB42-209ENST00000570199 UPP2O95045 317 aa6.82□□□□□ -1.32
EPB42-209ENST00000570199 F12P00748 615 aaPredicted RBP6.82□□□□□ -1.32
EPB42-209ENST00000570199 CTHP32929 405 aa6.82□□□□□ -1.32
EPB42-209ENST00000570199 MTMR2Q13614 643 aa6.82□□□□□ -1.32
EPB42-209ENST00000570199 LYPD8Q6UX82 237 aa6.82□□□□□ -1.32
EPB42-209ENST00000570199 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
EPB42-209ENST00000570199 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.81□□□□□ -1.32
EPB42-209ENST00000570199 CCDC155Q8N6L0 562 aa6.81□□□□□ -1.32
EPB42-209ENST00000570199 TTLL8A6PVC2 850 aa6.8□□□□□ -1.32
EPB42-209ENST00000570199 CFAP99D6REC4 459 aa6.8□□□□□ -1.32
EPB42-209ENST00000570199 ITGB2P05107 769 aa6.8□□□□□ -1.32
EPB42-209ENST00000570199 FIGNL2A6NMB9 653 aa6.79□□□□□ -1.32
EPB42-209ENST00000570199 SPTLC1O15269 473 aa6.79□□□□□ -1.32
EPB42-209ENST00000570199 ADAM23O75077 832 aa6.79□□□□□ -1.32
EPB42-209ENST00000570199 FSHRP23945 695 aa6.79□□□□□ -1.32
EPB42-209ENST00000570199 FOXK2Q01167 660 aa6.79□□□□□ -1.32
EPB42-209ENST00000570199 KANK3Q6NY19 840 aa6.79□□□□□ -1.32
EPB42-209ENST00000570199 C1QTNF2Q9BXJ5 285 aa6.79□□□□□ -1.32
EPB42-209ENST00000570199 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
EPB42-209ENST00000570199 SPDYE5A6NIY4 337 aa6.78□□□□□ -1.32
EPB42-209ENST00000570199 SSTR3P32745 418 aaPredicted RBP6.78□□□□□ -1.32
EPB42-209ENST00000570199 TSEN34Q9BSV6 310 aaKnown RBP6.78□□□□□ -1.32
EPB42-209ENST00000570199 SH3RF1Q7Z6J0 888 aa6.77□□□□□ -1.33
EPB42-209ENST00000570199 VWA5B2Q8N398 1253 aa6.77□□□□□ -1.33
EPB42-209ENST00000570199 PER1O15534 1290 aaPredicted RBP6.76□□□□□ -1.33
EPB42-209ENST00000570199 ITGA6P23229 1130 aa6.76□□□□□ -1.33
EPB42-209ENST00000570199 MARSP56192 900 aaKnown RBP6.76□□□□□ -1.33
EPB42-209ENST00000570199 AGERQ15109 404 aa6.76□□□□□ -1.33
EPB42-209ENST00000570199 LYPD4Q6UWN0 246 aa6.76□□□□□ -1.33
EPB42-209ENST00000570199 PCDHB15Q9Y5E8 787 aa6.76□□□□□ -1.33
EPB42-209ENST00000570199 CBLBQ13191 982 aa6.75□□□□□ -1.33
EPB42-209ENST00000570199 PLA2G4EQ3MJ16 856 aa6.75□□□□□ -1.33
EPB42-209ENST00000570199 BPHLQ86WA6 291 aaPredicted RBP6.75□□□□□ -1.33
EPB42-209ENST00000570199 SCARF2Q96GP6 870 aaPredicted RBP6.75□□□□□ -1.33
EPB42-209ENST00000570199 MAP4K5Q9Y4K4 846 aa6.75□□□□□ -1.33
EPB42-209ENST00000570199 CDC14CA4D256 554 aa6.74□□□□□ -1.33
EPB42-209ENST00000570199 SPINT1O43278 529 aa6.74□□□□□ -1.33
EPB42-209ENST00000570199 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
EPB42-209ENST00000570199 CCDC116Q8IYX3 515 aa6.74□□□□□ -1.33
EPB42-209ENST00000570199 SPOCK3Q9BQ16 436 aa6.74□□□□□ -1.33
EPB42-209ENST00000570199 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
EPB42-209ENST00000570199 PROCP04070 461 aa6.73□□□□□ -1.33
EPB42-209ENST00000570199 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
EPB42-209ENST00000570199 Q6ZVU0 165 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms