RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 TNS1Q9HBL0 1735 aaKnown RBP17.83■□□□□ 0.44
CAPN3-220ENST00000569827 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
CAPN3-220ENST00000569827 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
CAPN3-220ENST00000569827 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
CAPN3-220ENST00000569827 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
CAPN3-220ENST00000569827 DCAF11Q8TEB1 546 aa17.8■□□□□ 0.44
CAPN3-220ENST00000569827 LRP5O75197 1615 aa17.8■□□□□ 0.44
CAPN3-220ENST00000569827 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
CAPN3-220ENST00000569827 TOPAZ1Q8N9V7 1692 aa17.79■□□□□ 0.44
CAPN3-220ENST00000569827 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
CAPN3-220ENST00000569827 ATP7BP35670 1465 aa17.78■□□□□ 0.44
CAPN3-220ENST00000569827 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
CAPN3-220ENST00000569827 WASLO00401 505 aaPredicted RBP17.77■□□□□ 0.44
CAPN3-220ENST00000569827 ONECUT3O60422 494 aaPredicted RBP17.77■□□□□ 0.44
CAPN3-220ENST00000569827 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
CAPN3-220ENST00000569827 NUTM2GQ5VZR2 741 aa17.75■□□□□ 0.43
CAPN3-220ENST00000569827 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
CAPN3-220ENST00000569827 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
CAPN3-220ENST00000569827 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
CAPN3-220ENST00000569827 PRDM11Q9NQV5 511 aa17.73■□□□□ 0.43
CAPN3-220ENST00000569827 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
CAPN3-220ENST00000569827 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
CAPN3-220ENST00000569827 NRKQ7Z2Y5 1582 aa17.72■□□□□ 0.43
CAPN3-220ENST00000569827 KIAA0232Q92628 1395 aa17.72■□□□□ 0.43
CAPN3-220ENST00000569827 BAG6P46379 1132 aa17.72■□□□□ 0.43
CAPN3-220ENST00000569827 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
CAPN3-220ENST00000569827 STRN4Q9NRL3 753 aa17.71■□□□□ 0.43
CAPN3-220ENST00000569827 ZC3H6P61129 1189 aaKnown RBP17.7■□□□□ 0.42
CAPN3-220ENST00000569827 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
CAPN3-220ENST00000569827 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
CAPN3-220ENST00000569827 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
CAPN3-220ENST00000569827 HRCP23327 699 aa17.67■□□□□ 0.42
CAPN3-220ENST00000569827 CDK19Q9BWU1 502 aa17.67■□□□□ 0.42
CAPN3-220ENST00000569827 LMO7Q8WWI1 1683 aa17.67■□□□□ 0.42
CAPN3-220ENST00000569827 RREB1Q92766 1687 aa17.67■□□□□ 0.42
CAPN3-220ENST00000569827 SPATA31A1Q5TZJ5 1347 aa17.67■□□□□ 0.42
CAPN3-220ENST00000569827 NUP188Q5SRE5 1749 aa17.67■□□□□ 0.42
CAPN3-220ENST00000569827 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
CAPN3-220ENST00000569827 CAMTA1Q9Y6Y1 1673 aa17.65■□□□□ 0.42
CAPN3-220ENST00000569827 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
CAPN3-220ENST00000569827 ACEP12821 1306 aa17.65■□□□□ 0.42
CAPN3-220ENST00000569827 TRIM37O94972 964 aa17.64■□□□□ 0.41
CAPN3-220ENST00000569827 RGPD5Q99666 1765 aa17.63■□□□□ 0.41
CAPN3-220ENST00000569827 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
CAPN3-220ENST00000569827 NBPF1Q3BBV0 1214 aa17.62■□□□□ 0.41
CAPN3-220ENST00000569827 SBF2Q86WG5 1849 aa17.62■□□□□ 0.41
CAPN3-220ENST00000569827 POLR3AO14802 1390 aaPredicted RBP17.62■□□□□ 0.41
CAPN3-220ENST00000569827 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
CAPN3-220ENST00000569827 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
CAPN3-220ENST00000569827 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
CAPN3-220ENST00000569827 PARP4Q9UKK3 1724 aaKnown RBP17.61■□□□□ 0.41
CAPN3-220ENST00000569827 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
CAPN3-220ENST00000569827 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
CAPN3-220ENST00000569827 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
CAPN3-220ENST00000569827 EVA1CP58658 441 aa17.59■□□□□ 0.41
CAPN3-220ENST00000569827 ABTB2Q8N961 1025 aa17.59■□□□□ 0.41
CAPN3-220ENST00000569827 CCDC61Q9Y6R9 512 aa17.58■□□□□ 0.4
CAPN3-220ENST00000569827 PIK3C2AO00443 1686 aa17.58■□□□□ 0.4
CAPN3-220ENST00000569827 APBA3O96018 575 aa17.57■□□□□ 0.4
CAPN3-220ENST00000569827 CAMKK2Q96RR4 588 aa17.57■□□□□ 0.4
CAPN3-220ENST00000569827 CABP2Q9NPB3 220 aa17.57■□□□□ 0.4
CAPN3-220ENST00000569827 LRRC37A3O60309 1634 aa17.57■□□□□ 0.4
CAPN3-220ENST00000569827 SRPK2P78362 688 aaKnown RBP17.56■□□□□ 0.4
CAPN3-220ENST00000569827 FAM196AQ6ZSG2 479 aa17.56■□□□□ 0.4
CAPN3-220ENST00000569827 COL18A1P39060 1754 aa17.56■□□□□ 0.4
CAPN3-220ENST00000569827 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
CAPN3-220ENST00000569827 USP19O94966 1318 aa17.55■□□□□ 0.4
CAPN3-220ENST00000569827 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
CAPN3-220ENST00000569827 STAC3Q96MF2 364 aa17.55■□□□□ 0.4
CAPN3-220ENST00000569827 COL5A2P05997 1499 aaPredicted RBP17.55■□□□□ 0.4
CAPN3-220ENST00000569827 PEAK1Q9H792 1746 aa17.55■□□□□ 0.4
CAPN3-220ENST00000569827 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
CAPN3-220ENST00000569827 TRPM1Q7Z4N2 1603 aa17.53■□□□□ 0.4
CAPN3-220ENST00000569827 CPDO75976 1380 aa17.53■□□□□ 0.4
CAPN3-220ENST00000569827 CENPJQ9HC77 1338 aaPredicted RBP17.52■□□□□ 0.4
CAPN3-220ENST00000569827 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
CAPN3-220ENST00000569827 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
CAPN3-220ENST00000569827 GCP02774 474 aa17.51■□□□□ 0.39
CAPN3-220ENST00000569827 SLIT3O75094 1523 aa17.51■□□□□ 0.39
CAPN3-220ENST00000569827 KAT6BQ8WYB5 2073 aa17.5■□□□□ 0.39
CAPN3-220ENST00000569827 USP6P35125 1406 aa17.49■□□□□ 0.39
CAPN3-220ENST00000569827 NLRP13Q86W25 1043 aa17.49■□□□□ 0.39
CAPN3-220ENST00000569827 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
CAPN3-220ENST00000569827 CRB1P82279 1406 aa17.47■□□□□ 0.39
CAPN3-220ENST00000569827 NLRP6P59044 892 aa17.47■□□□□ 0.39
CAPN3-220ENST00000569827 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
CAPN3-220ENST00000569827 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
CAPN3-220ENST00000569827 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
CAPN3-220ENST00000569827 SOX12O15370 315 aa17.46■□□□□ 0.39
CAPN3-220ENST00000569827 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
CAPN3-220ENST00000569827 CASZ1Q86V15 1759 aa17.45■□□□□ 0.38
CAPN3-220ENST00000569827 LTN1O94822 1766 aa17.44■□□□□ 0.38
CAPN3-220ENST00000569827 OVOS2A0A0G2JMS6 1433 aa17.44■□□□□ 0.38
CAPN3-220ENST00000569827 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
CAPN3-220ENST00000569827 OVOS2Q6IE36 1432 aa17.44■□□□□ 0.38
CAPN3-220ENST00000569827 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
CAPN3-220ENST00000569827 TOM1L2Q6ZVM7 507 aa17.43■□□□□ 0.38
CAPN3-220ENST00000569827 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
CAPN3-220ENST00000569827 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
CAPN3-220ENST00000569827 THRAP3Q9Y2W1 955 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms