RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 ALS2Q96Q42 1657 aa28.11■■■□□ 2.09
CDH11-218ENST00000569783 ARHGEF28Q8N1W1 1705 aaKnown RBP28.1■■■□□ 2.09
CDH11-218ENST00000569783 CDK19Q9BWU1 502 aa28.1■■■□□ 2.09
CDH11-218ENST00000569783 BRWD3Q6RI45 1802 aa28.08■■■□□ 2.09
CDH11-218ENST00000569783 ATP7BP35670 1465 aa28.08■■■□□ 2.09
CDH11-218ENST00000569783 FAM98CQ17RN3 349 aaKnown RBP28.08■■■□□ 2.09
CDH11-218ENST00000569783 PRDM11Q9NQV5 511 aa28.08■■■□□ 2.09
CDH11-218ENST00000569783 COL14A1Q05707 1796 aaKnown RBP28.08■■■□□ 2.09
CDH11-218ENST00000569783 ITSN1Q15811 1721 aa28.06■■■□□ 2.08
CDH11-218ENST00000569783 DEFB132Q7Z7B7 95 aa28.05■■■□□ 2.08
CDH11-218ENST00000569783 CCDC61Q9Y6R9 512 aa28.04■■■□□ 2.08
CDH11-218ENST00000569783 NRAPQ86VF7 1730 aa28.04■■■□□ 2.08
CDH11-218ENST00000569783 KIAA1210Q9ULL0 1709 aa28.01■■■□□ 2.07
CDH11-218ENST00000569783 ACEP12821 1306 aa28.01■■■□□ 2.07
CDH11-218ENST00000569783 SPATA31A5Q5VU36 1347 aa28.01■■■□□ 2.07
CDH11-218ENST00000569783 SPATA31A7Q8IWB4 1347 aa28.01■■■□□ 2.07
CDH11-218ENST00000569783 NBPF1Q3BBV0 1214 aa28■■■□□ 2.07
CDH11-218ENST00000569783 POLR3AO14802 1390 aaPredicted RBP27.99■■■□□ 2.07
CDH11-218ENST00000569783 NBPF8Q3BBV2 869 aa27.99■■■□□ 2.07
CDH11-218ENST00000569783 KIAA0232Q92628 1395 aa27.99■■■□□ 2.07
CDH11-218ENST00000569783 BAG6P46379 1132 aa27.98■■■□□ 2.07
CDH11-218ENST00000569783 NUTM2GQ5VZR2 741 aa27.98■■■□□ 2.07
CDH11-218ENST00000569783 PLEKHG3A1L390 1219 aa27.97■■■□□ 2.07
CDH11-218ENST00000569783 SRPK2P78362 688 aaKnown RBP27.97■■■□□ 2.07
CDH11-218ENST00000569783 CRYBG1Q9Y4K1 1723 aa27.96■■■□□ 2.07
CDH11-218ENST00000569783 ZC3H6P61129 1189 aaKnown RBP27.96■■■□□ 2.07
CDH11-218ENST00000569783 CHRNA2Q15822 529 aa27.96■■■□□ 2.07
CDH11-218ENST00000569783 ABTB2Q8N961 1025 aa27.95■■■□□ 2.06
CDH11-218ENST00000569783 STRN4Q9NRL3 753 aa27.95■■■□□ 2.06
CDH11-218ENST00000569783 CENPJQ9HC77 1338 aaPredicted RBP27.94■■■□□ 2.06
CDH11-218ENST00000569783 SRCAPQ6ZRS2 3230 aa27.94■■■□□ 2.06
CDH11-218ENST00000569783 TOPAZ1Q8N9V7 1692 aa27.92■■■□□ 2.06
CDH11-218ENST00000569783 SPATA31A1Q5TZJ5 1347 aa27.92■■■□□ 2.06
CDH11-218ENST00000569783 EVA1CP58658 441 aa27.91■■■□□ 2.06
CDH11-218ENST00000569783 PHRF1Q9P1Y6 1649 aaKnown RBP27.9■■■□□ 2.06
CDH11-218ENST00000569783 FAM182BQ5T319 152 aa27.89■■■□□ 2.06
CDH11-218ENST00000569783 CABP2Q9NPB3 220 aa27.89■■■□□ 2.06
CDH11-218ENST00000569783 PPIP5K1Q6PFW1 1433 aa27.89■■■□□ 2.06
CDH11-218ENST00000569783 NLRP13Q86W25 1043 aa27.88■■■□□ 2.05
CDH11-218ENST00000569783 USP35Q9P2H5 1018 aa27.86■■■□□ 2.05
CDH11-218ENST00000569783 THSD7AQ9UPZ6 1657 aa27.85■■■□□ 2.05
CDH11-218ENST00000569783 L3MBTL2Q969R5 705 aa27.85■■■□□ 2.05
CDH11-218ENST00000569783 BRD4O60885 1362 aaPredicted RBP27.84■■■□□ 2.05
CDH11-218ENST00000569783 EN1Q05925 392 aaPredicted RBP27.83■■■□□ 2.05
CDH11-218ENST00000569783 USP19O94966 1318 aa27.83■■■□□ 2.05
CDH11-218ENST00000569783 SSH2Q76I76 1423 aa27.83■■■□□ 2.05
CDH11-218ENST00000569783 FAM196AQ6ZSG2 479 aa27.82■■■□□ 2.04
CDH11-218ENST00000569783 CPDO75976 1380 aa27.82■■■□□ 2.04
CDH11-218ENST00000569783 GCP02774 474 aa27.81■■■□□ 2.04
CDH11-218ENST00000569783 BARGINQ6ZT62 677 aa27.81■■■□□ 2.04
CDH11-218ENST00000569783 NRKQ7Z2Y5 1582 aa27.81■■■□□ 2.04
CDH11-218ENST00000569783 RGPD1P0DJD0 1748 aa27.81■■■□□ 2.04
CDH11-218ENST00000569783 CABP1Q9NZU7 370 aa27.8■■■□□ 2.04
CDH11-218ENST00000569783 QRICH2Q9H0J4 1663 aa27.79■■■□□ 2.04
CDH11-218ENST00000569783 EVC2Q86UK5 1308 aa27.79■■■□□ 2.04
CDH11-218ENST00000569783 PDE3BQ13370 1112 aa27.79■■■□□ 2.04
CDH11-218ENST00000569783 LARP1Q6PKG0 1096 aaKnown RBP27.79■■■□□ 2.04
CDH11-218ENST00000569783 PSDA5PKW4 1024 aaPredicted RBP27.78■■■□□ 2.04
CDH11-218ENST00000569783 TCP11L2Q8N4U5 519 aa27.78■■■□□ 2.04
CDH11-218ENST00000569783 NEUROD1Q13562 356 aa27.77■■■□□ 2.04
CDH11-218ENST00000569783 SIN3AQ96ST3 1273 aa27.77■■■□□ 2.04
CDH11-218ENST00000569783 CAMTA1Q9Y6Y1 1673 aa27.77■■■□□ 2.04
CDH11-218ENST00000569783 TRIM37O94972 964 aa27.76■■■□□ 2.03
CDH11-218ENST00000569783 NLRP6P59044 892 aa27.76■■■□□ 2.03
CDH11-218ENST00000569783 DISP2A7MBM2 1401 aa27.75■■■□□ 2.03
CDH11-218ENST00000569783 USP6P35125 1406 aa27.75■■■□□ 2.03
CDH11-218ENST00000569783 ZBTB7CA1YPR0 619 aa27.75■■■□□ 2.03
CDH11-218ENST00000569783 THRAP3Q9Y2W1 955 aaKnown RBP27.75■■■□□ 2.03
CDH11-218ENST00000569783 ROCK2O75116 1388 aaKnown RBP27.74■■■□□ 2.03
CDH11-218ENST00000569783 EZH2Q15910 746 aaKnown RBP27.72■■■□□ 2.03
CDH11-218ENST00000569783 LMO7Q8WWI1 1683 aa27.72■■■□□ 2.03
CDH11-218ENST00000569783 APBA3O96018 575 aa27.71■■■□□ 2.03
CDH11-218ENST00000569783 ZNF692Q9BU19 519 aaPredicted RBP27.69■■■□□ 2.02
CDH11-218ENST00000569783 TRPM1Q7Z4N2 1603 aa27.69■■■□□ 2.02
CDH11-218ENST00000569783 COL5A2P05997 1499 aaPredicted RBP27.69■■■□□ 2.02
CDH11-218ENST00000569783 LRP5O75197 1615 aa27.68■■■□□ 2.02
CDH11-218ENST00000569783 TNS1Q9HBL0 1735 aaKnown RBP27.68■■■□□ 2.02
CDH11-218ENST00000569783 R3HDM1Q15032 1099 aaKnown RBP27.68■■■□□ 2.02
CDH11-218ENST00000569783 CAMKK2Q96RR4 588 aa27.68■■■□□ 2.02
CDH11-218ENST00000569783 PARD3Q8TEW0 1356 aa27.67■■■□□ 2.02
CDH11-218ENST00000569783 CRB1P82279 1406 aa27.67■■■□□ 2.02
CDH11-218ENST00000569783 AATKQ6ZMQ8 1374 aa27.66■■■□□ 2.02
CDH11-218ENST00000569783 C11orf95C9JLR9 678 aaPredicted RBP27.65■■■□□ 2.02
CDH11-218ENST00000569783 SLIT3O75094 1523 aa27.64■■■□□ 2.02
CDH11-218ENST00000569783 TOM1L2Q6ZVM7 507 aa27.63■■■□□ 2.01
CDH11-218ENST00000569783 KCNH5Q8NCM2 988 aa27.63■■■□□ 2.01
CDH11-218ENST00000569783 TTC21BQ7Z4L5 1316 aa27.62■■■□□ 2.01
CDH11-218ENST00000569783 TTC21AQ8NDW8 1320 aa27.6■■■□□ 2.01
CDH11-218ENST00000569783 PIK3C2AO00443 1686 aa27.59■■■□□ 2.01
CDH11-218ENST00000569783 NBPF14Q5TI25 921 aa27.58■■■□□ 2.01
CDH11-218ENST00000569783 SOX12O15370 315 aa27.57■■■□□ 2
CDH11-218ENST00000569783 DDB1Q16531 1140 aa27.57■■■□□ 2
CDH11-218ENST00000569783 PARP4Q9UKK3 1724 aaKnown RBP27.57■■■□□ 2
CDH11-218ENST00000569783 ARHGEF25Q86VW2 580 aa27.56■■■□□ 2
CDH11-218ENST00000569783 WDR17Q8IZU2 1322 aa27.56■■■□□ 2
CDH11-218ENST00000569783 KTN1Q86UP2 1357 aaKnown RBP27.56■■■□□ 2
CDH11-218ENST00000569783 OVOS2A0A0G2JMS6 1433 aa27.56■■■□□ 2
CDH11-218ENST00000569783 OVOS2A0A0J9YW53 1432 aa27.56■■■□□ 2
CDH11-218ENST00000569783 CPSF1Q10570 1443 aaKnown RBP27.56■■■□□ 2
CDH11-218ENST00000569783 OVOS2Q6IE36 1432 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms