RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 ZCCHC11Q5TAX3 1644 aaKnown RBP9.58□□□□□ -0.88
GDE1-204ENST00000569773 APLP1P51693 650 aa9.58□□□□□ -0.88
GDE1-204ENST00000569773 MAP3K4Q9Y6R4 1608 aa9.57□□□□□ -0.88
GDE1-204ENST00000569773 ACTN4O43707 911 aaKnown RBP9.57□□□□□ -0.88
GDE1-204ENST00000569773 FDX1P10109 184 aa9.57□□□□□ -0.88
GDE1-204ENST00000569773 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
GDE1-204ENST00000569773 PRR14Q9BWN1 585 aa9.57□□□□□ -0.88
GDE1-204ENST00000569773 PCDHB15Q9Y5E8 787 aa9.57□□□□□ -0.88
GDE1-204ENST00000569773 ASXL2Q76L83 1435 aa9.56□□□□□ -0.88
GDE1-204ENST00000569773 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
GDE1-204ENST00000569773 PLB1Q6P1J6 1458 aa9.56□□□□□ -0.88
GDE1-204ENST00000569773 PUS10Q3MIT2 529 aaKnown RBP9.56□□□□□ -0.88
GDE1-204ENST00000569773 GRIPAP1Q4V328 841 aa9.56□□□□□ -0.88
GDE1-204ENST00000569773 GJA5P36382 358 aa9.55□□□□□ -0.88
GDE1-204ENST00000569773 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
GDE1-204ENST00000569773 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
GDE1-204ENST00000569773 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
GDE1-204ENST00000569773 PTPN5P54829 565 aa9.54□□□□□ -0.88
GDE1-204ENST00000569773 QPCTQ16769 361 aa9.54□□□□□ -0.88
GDE1-204ENST00000569773 TUSC1Q2TAM9 212 aa9.54□□□□□ -0.88
GDE1-204ENST00000569773 EPRSP07814 1512 aaKnown RBP9.53□□□□□ -0.88
GDE1-204ENST00000569773 MORN1Q5T089 497 aa9.53□□□□□ -0.88
GDE1-204ENST00000569773 CABLES1Q8TDN4 633 aa9.53□□□□□ -0.88
GDE1-204ENST00000569773 ABCA8O94911 1581 aa9.53□□□□□ -0.88
GDE1-204ENST00000569773 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.89
GDE1-204ENST00000569773 LILRB3O75022 631 aa9.51□□□□□ -0.89
GDE1-204ENST00000569773 SLC27A5Q9Y2P5 690 aa9.51□□□□□ -0.89
GDE1-204ENST00000569773 COL17A1Q9UMD9 1497 aaPredicted RBP9.51□□□□□ -0.89
GDE1-204ENST00000569773 NUTM2BA6NNL0 878 aaPredicted RBP9.5□□□□□ -0.89
GDE1-204ENST00000569773 NUTM2EB1AL46 878 aaPredicted RBP9.5□□□□□ -0.89
GDE1-204ENST00000569773 HRCP23327 699 aa9.5□□□□□ -0.89
GDE1-204ENST00000569773 RFC5P40937 340 aa9.5□□□□□ -0.89
GDE1-204ENST00000569773 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
GDE1-204ENST00000569773 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
GDE1-204ENST00000569773 PPP2R2DQ66LE6 453 aa9.5□□□□□ -0.89
GDE1-204ENST00000569773 NUTM2AQ8IVF1 878 aaPredicted RBP9.5□□□□□ -0.89
GDE1-204ENST00000569773 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
GDE1-204ENST00000569773 TTBK1Q5TCY1 1321 aaPredicted RBP9.5□□□□□ -0.89
GDE1-204ENST00000569773 CFAP43Q8NDM7 1665 aa9.49□□□□□ -0.89
GDE1-204ENST00000569773 C6orf229H3BNL8 230 aa9.49□□□□□ -0.89
GDE1-204ENST00000569773 RTL5Q5HYW3 569 aaPredicted RBP9.49□□□□□ -0.89
GDE1-204ENST00000569773 BLOC1S3Q6QNY0 202 aa9.49□□□□□ -0.89
GDE1-204ENST00000569773 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
GDE1-204ENST00000569773 GOLGA3Q08378 1498 aa9.48□□□□□ -0.89
GDE1-204ENST00000569773 WDR7Q9Y4E6 1490 aa9.48□□□□□ -0.89
GDE1-204ENST00000569773 RGS20O76081 388 aa9.48□□□□□ -0.89
GDE1-204ENST00000569773 MTMR2Q13614 643 aa9.48□□□□□ -0.89
GDE1-204ENST00000569773 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
GDE1-204ENST00000569773 SAMD9Q5K651 1589 aa9.47□□□□□ -0.89
GDE1-204ENST00000569773 COPS2P61201 443 aa9.47□□□□□ -0.89
GDE1-204ENST00000569773 TIMELESSQ9UNS1 1208 aa9.47□□□□□ -0.89
GDE1-204ENST00000569773 NR1I2O75469 434 aa9.46□□□□□ -0.9
GDE1-204ENST00000569773 RNF19BQ6ZMZ0 732 aa9.46□□□□□ -0.9
GDE1-204ENST00000569773 SCUBE3Q8IX30 993 aa9.46□□□□□ -0.9
GDE1-204ENST00000569773 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.9
GDE1-204ENST00000569773 Q3C1V9 767 aa9.45□□□□□ -0.9
GDE1-204ENST00000569773 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
GDE1-204ENST00000569773 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
GDE1-204ENST00000569773 TEX14Q8IWB6 1497 aa9.45□□□□□ -0.9
GDE1-204ENST00000569773 SPDYE5A6NIY4 337 aa9.44□□□□□ -0.9
GDE1-204ENST00000569773 MAGI3Q5TCQ9 1506 aa9.44□□□□□ -0.9
GDE1-204ENST00000569773 CFAP99D6REC4 459 aa9.43□□□□□ -0.9
GDE1-204ENST00000569773 AP1G2O75843 785 aa9.43□□□□□ -0.9
GDE1-204ENST00000569773 TMEM259Q4ZIN3 620 aa9.43□□□□□ -0.9
GDE1-204ENST00000569773 TSC1Q92574 1164 aa9.43□□□□□ -0.9
GDE1-204ENST00000569773 MTRQ99707 1265 aa9.43□□□□□ -0.9
GDE1-204ENST00000569773 FLIIQ13045 1269 aa9.42□□□□□ -0.9
GDE1-204ENST00000569773 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
GDE1-204ENST00000569773 RETREG3Q86VR2 466 aa9.42□□□□□ -0.9
GDE1-204ENST00000569773 PRR7Q8TB68 274 aa9.42□□□□□ -0.9
GDE1-204ENST00000569773 THAP11Q96EK4 314 aa9.42□□□□□ -0.9
GDE1-204ENST00000569773 ABCA9Q8IUA7 1624 aa9.42□□□□□ -0.9
GDE1-204ENST00000569773 ADGRL1O94910 1474 aa9.41□□□□□ -0.9
GDE1-204ENST00000569773 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
GDE1-204ENST00000569773 MCM6Q14566 821 aa9.41□□□□□ -0.9
GDE1-204ENST00000569773 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
GDE1-204ENST00000569773 RAPGEF6Q8TEU7 1601 aa9.41□□□□□ -0.9
GDE1-204ENST00000569773 ATP10BO94823 1461 aa9.4□□□□□ -0.9
GDE1-204ENST00000569773 TLL1O43897 1013 aa9.4□□□□□ -0.9
GDE1-204ENST00000569773 BANK1Q8NDB2 785 aa9.4□□□□□ -0.9
GDE1-204ENST00000569773 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
GDE1-204ENST00000569773 SNRKQ9NRH2 765 aa9.4□□□□□ -0.9
GDE1-204ENST00000569773 CD109Q6YHK3 1445 aa9.39□□□□□ -0.91
GDE1-204ENST00000569773 ZPR1O75312 459 aa9.39□□□□□ -0.91
GDE1-204ENST00000569773 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
GDE1-204ENST00000569773 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
GDE1-204ENST00000569773 TJAP1Q5JTD0 557 aa9.39□□□□□ -0.91
GDE1-204ENST00000569773 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
GDE1-204ENST00000569773 ZNF516Q92618 1163 aa9.39□□□□□ -0.91
GDE1-204ENST00000569773 ARAP3Q8WWN8 1544 aa9.38□□□□□ -0.91
GDE1-204ENST00000569773 ERICH6Q7L0X2 663 aa9.38□□□□□ -0.91
GDE1-204ENST00000569773 SPSB2Q99619 263 aa9.38□□□□□ -0.91
GDE1-204ENST00000569773 IL21Q9HBE4 155 aa9.38□□□□□ -0.91
GDE1-204ENST00000569773 KIF21BO75037 1637 aa9.37□□□□□ -0.91
GDE1-204ENST00000569773 EEA1Q15075 1411 aa9.37□□□□□ -0.91
GDE1-204ENST00000569773 NUP153P49790 1475 aaKnown RBP9.36□□□□□ -0.91
GDE1-204ENST00000569773 ADH1BP00325 375 aa9.35□□□□□ -0.91
GDE1-204ENST00000569773 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
GDE1-204ENST00000569773 MTMR14Q8NCE2 650 aa9.35□□□□□ -0.91
GDE1-204ENST00000569773 PRDM9Q9NQV7 894 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms