RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 BRD4O60885 1362 aaPredicted RBP15.63■□□□□ 0.09
SHCBP1-207ENST00000569702 USP47Q96K76 1375 aa15.63■□□□□ 0.09
SHCBP1-207ENST00000569702 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
SHCBP1-207ENST00000569702 SOCS7O14512 581 aa15.63■□□□□ 0.09
SHCBP1-207ENST00000569702 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
SHCBP1-207ENST00000569702 USP6P35125 1406 aa15.62■□□□□ 0.09
SHCBP1-207ENST00000569702 ABCA3Q99758 1704 aa15.62■□□□□ 0.09
SHCBP1-207ENST00000569702 SSH2Q76I76 1423 aa15.61■□□□□ 0.09
SHCBP1-207ENST00000569702 USP21Q9UK80 565 aa15.61■□□□□ 0.09
SHCBP1-207ENST00000569702 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
SHCBP1-207ENST00000569702 BCL9LQ86UU0 1499 aa15.6■□□□□ 0.09
SHCBP1-207ENST00000569702 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
SHCBP1-207ENST00000569702 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
SHCBP1-207ENST00000569702 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
SHCBP1-207ENST00000569702 QTRT2Q9H974 415 aaKnown RBP15.6■□□□□ 0.09
SHCBP1-207ENST00000569702 SLIT2O94813 1529 aa15.59■□□□□ 0.09
SHCBP1-207ENST00000569702 RXRBP28702 533 aa15.59■□□□□ 0.09
SHCBP1-207ENST00000569702 ABTB2Q8N961 1025 aa15.59■□□□□ 0.09
SHCBP1-207ENST00000569702 CRYBG1Q9Y4K1 1723 aa15.59■□□□□ 0.09
SHCBP1-207ENST00000569702 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
SHCBP1-207ENST00000569702 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
SHCBP1-207ENST00000569702 TRPC5Q9UL62 973 aaPredicted RBP15.57■□□□□ 0.08
SHCBP1-207ENST00000569702 USP19O94966 1318 aa15.57■□□□□ 0.08
SHCBP1-207ENST00000569702 ATRNO75882 1429 aa15.57■□□□□ 0.08
SHCBP1-207ENST00000569702 CD163L1Q9NR16 1453 aa15.57■□□□□ 0.08
SHCBP1-207ENST00000569702 RBM6P78332 1123 aaKnown RBP15.56■□□□□ 0.08
SHCBP1-207ENST00000569702 TMF1P82094 1093 aa15.56■□□□□ 0.08
SHCBP1-207ENST00000569702 NUTM2GQ5VZR2 741 aa15.56■□□□□ 0.08
SHCBP1-207ENST00000569702 NLRP13Q86W25 1043 aa15.56■□□□□ 0.08
SHCBP1-207ENST00000569702 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
SHCBP1-207ENST00000569702 AKAP12Q02952 1782 aa15.56■□□□□ 0.08
SHCBP1-207ENST00000569702 CDK12Q9NYV4 1490 aaPredicted RBP15.55■□□□□ 0.08
SHCBP1-207ENST00000569702 TTC21BQ7Z4L5 1316 aa15.55■□□□□ 0.08
SHCBP1-207ENST00000569702 TMC1Q8TDI8 760 aa15.55■□□□□ 0.08
SHCBP1-207ENST00000569702 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.54■□□□□ 0.08
SHCBP1-207ENST00000569702 KTN1Q86UP2 1357 aaKnown RBP15.54■□□□□ 0.08
SHCBP1-207ENST00000569702 NINLQ9Y2I6 1382 aa15.54■□□□□ 0.08
SHCBP1-207ENST00000569702 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
SHCBP1-207ENST00000569702 TTC21AQ8NDW8 1320 aa15.53■□□□□ 0.08
SHCBP1-207ENST00000569702 NLRP6P59044 892 aa15.53■□□□□ 0.08
SHCBP1-207ENST00000569702 NWD2Q9ULI1 1742 aa15.53■□□□□ 0.08
SHCBP1-207ENST00000569702 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
SHCBP1-207ENST00000569702 KIAA0232Q92628 1395 aa15.52■□□□□ 0.08
SHCBP1-207ENST00000569702 MON2Q7Z3U7 1717 aa15.52■□□□□ 0.08
SHCBP1-207ENST00000569702 PIK3C2AO00443 1686 aa15.52■□□□□ 0.08
SHCBP1-207ENST00000569702 PLCH1Q4KWH8 1693 aa15.52■□□□□ 0.08
SHCBP1-207ENST00000569702 GCP02774 474 aa15.52■□□□□ 0.08
SHCBP1-207ENST00000569702 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
SHCBP1-207ENST00000569702 TERF2IPQ9NYB0 399 aa15.52■□□□□ 0.08
SHCBP1-207ENST00000569702 COL14A1Q05707 1796 aaKnown RBP15.52■□□□□ 0.07
SHCBP1-207ENST00000569702 CPDO75976 1380 aa15.51■□□□□ 0.07
SHCBP1-207ENST00000569702 CDCA8Q53HL2 280 aa15.51■□□□□ 0.07
SHCBP1-207ENST00000569702 HDGFL2Q7Z4V5 671 aaPredicted RBP15.51■□□□□ 0.07
SHCBP1-207ENST00000569702 PRDM11Q9NQV5 511 aa15.51■□□□□ 0.07
SHCBP1-207ENST00000569702 A0A1W2PP64 1363 aa15.5■□□□□ 0.07
SHCBP1-207ENST00000569702 SLIT3O75094 1523 aa15.5■□□□□ 0.07
SHCBP1-207ENST00000569702 ZC3H6P61129 1189 aaKnown RBP15.5■□□□□ 0.07
SHCBP1-207ENST00000569702 EIF4G2P78344 907 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHCBP1-207ENST00000569702 VPS72Q15906 364 aa15.5■□□□□ 0.07
SHCBP1-207ENST00000569702 BTG4Q9NY30 223 aa15.5■□□□□ 0.07
SHCBP1-207ENST00000569702 RGS12O14924 1447 aa15.5■□□□□ 0.07
SHCBP1-207ENST00000569702 EDC4Q6P2E9 1401 aaKnown RBP15.49■□□□□ 0.07
SHCBP1-207ENST00000569702 USP31Q70CQ4 1352 aa15.49■□□□□ 0.07
SHCBP1-207ENST00000569702 HSPA5P11021 654 aaKnown RBP15.48■□□□□ 0.07
SHCBP1-207ENST00000569702 CHRNA2Q15822 529 aa15.48■□□□□ 0.07
SHCBP1-207ENST00000569702 NRAPQ86VF7 1730 aa15.48■□□□□ 0.07
SHCBP1-207ENST00000569702 GLI3P10071 1580 aa15.47■□□□□ 0.07
SHCBP1-207ENST00000569702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.47■□□□□ 0.07
SHCBP1-207ENST00000569702 ANKRD36BQ8N2N9 1353 aa15.47■□□□□ 0.07
SHCBP1-207ENST00000569702 NME9Q86XW9 330 aa15.46■□□□□ 0.07
SHCBP1-207ENST00000569702 KCNH5Q8NCM2 988 aa15.46■□□□□ 0.07
SHCBP1-207ENST00000569702 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
SHCBP1-207ENST00000569702 ONECUT3O60422 494 aaPredicted RBP15.45■□□□□ 0.06
SHCBP1-207ENST00000569702 LMO7Q8WWI1 1683 aa15.44■□□□□ 0.06
SHCBP1-207ENST00000569702 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
SHCBP1-207ENST00000569702 CAMTA1Q9Y6Y1 1673 aa15.44■□□□□ 0.06
SHCBP1-207ENST00000569702 ARHGEF25Q86VW2 580 aa15.43■□□□□ 0.06
SHCBP1-207ENST00000569702 AATKQ6ZMQ8 1374 aa15.43■□□□□ 0.06
SHCBP1-207ENST00000569702 SPATA31A5Q5VU36 1347 aa15.43■□□□□ 0.06
SHCBP1-207ENST00000569702 SPATA31A7Q8IWB4 1347 aa15.43■□□□□ 0.06
SHCBP1-207ENST00000569702 CCDC9Q9Y3X0 531 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-207ENST00000569702 NFAT5O94916 1531 aa15.42■□□□□ 0.06
SHCBP1-207ENST00000569702 OVOS2A0A0J9YW53 1432 aa15.42■□□□□ 0.06
SHCBP1-207ENST00000569702 OVOS2Q6IE36 1432 aa15.42■□□□□ 0.06
SHCBP1-207ENST00000569702 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
SHCBP1-207ENST00000569702 MYOM1P52179 1685 aa15.41■□□□□ 0.06
SHCBP1-207ENST00000569702 COL18A1P39060 1754 aa15.4■□□□□ 0.06
SHCBP1-207ENST00000569702 EP400Q96L91 3159 aa15.4■□□□□ 0.06
SHCBP1-207ENST00000569702 SPATA31A1Q5TZJ5 1347 aa15.4■□□□□ 0.06
SHCBP1-207ENST00000569702 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
SHCBP1-207ENST00000569702 C11orf95C9JLR9 678 aaPredicted RBP15.39■□□□□ 0.05
SHCBP1-207ENST00000569702 SOX12O15370 315 aa15.39■□□□□ 0.05
SHCBP1-207ENST00000569702 EVA1CP58658 441 aa15.39■□□□□ 0.05
SHCBP1-207ENST00000569702 SEPT12Q8IYM1 358 aa15.39■□□□□ 0.05
SHCBP1-207ENST00000569702 CARD14Q9BXL6 1004 aa15.39■□□□□ 0.05
SHCBP1-207ENST00000569702 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
SHCBP1-207ENST00000569702 FYB1O15117 783 aa15.38■□□□□ 0.05
SHCBP1-207ENST00000569702 LARP1Q6PKG0 1096 aaKnown RBP15.38■□□□□ 0.05
SHCBP1-207ENST00000569702 UPF1Q92900 1129 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHCBP1-207ENST00000569702 ZBTB7CA1YPR0 619 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms