RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.32
EDC3-217ENST00000569606 PSME1Q06323 249 aa17.08■□□□□ 0.32
EDC3-217ENST00000569606 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
EDC3-217ENST00000569606 PXDNQ92626 1479 aa17.07■□□□□ 0.32
EDC3-217ENST00000569606 NSD2O96028 1365 aa17.07■□□□□ 0.32
EDC3-217ENST00000569606 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
EDC3-217ENST00000569606 FYB1O15117 783 aa17.07■□□□□ 0.32
EDC3-217ENST00000569606 ANP32CO43423 234 aa17.07■□□□□ 0.32
EDC3-217ENST00000569606 KRT28Q7Z3Y7 464 aa17.07■□□□□ 0.32
EDC3-217ENST00000569606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
EDC3-217ENST00000569606 DDX17Q92841 729 aaKnown RBP17.07■□□□□ 0.32
EDC3-217ENST00000569606 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
EDC3-217ENST00000569606 NME9Q86XW9 330 aa17.06■□□□□ 0.32
EDC3-217ENST00000569606 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
EDC3-217ENST00000569606 USP54Q70EL1 1684 aa17.06■□□□□ 0.32
EDC3-217ENST00000569606 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
EDC3-217ENST00000569606 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
EDC3-217ENST00000569606 MARF1Q9Y4F3 1742 aaKnown RBP17.05■□□□□ 0.32
EDC3-217ENST00000569606 UBAP1LF5GYI3 381 aa17.05■□□□□ 0.32
EDC3-217ENST00000569606 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
EDC3-217ENST00000569606 ILDR1Q86SU0 546 aaPredicted RBP17.05■□□□□ 0.32
EDC3-217ENST00000569606 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
EDC3-217ENST00000569606 AHDC1Q5TGY3 1603 aaPredicted RBP17.05■□□□□ 0.32
EDC3-217ENST00000569606 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
EDC3-217ENST00000569606 SOS2Q07890 1332 aaPredicted RBP17.03■□□□□ 0.32
EDC3-217ENST00000569606 OVOS2A0A0J9YW53 1432 aa17.03■□□□□ 0.32
EDC3-217ENST00000569606 OVOS2Q6IE36 1432 aa17.03■□□□□ 0.32
EDC3-217ENST00000569606 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.32
EDC3-217ENST00000569606 RALBP1Q15311 655 aa17.02■□□□□ 0.32
EDC3-217ENST00000569606 MIER1Q8N108 512 aa17.02■□□□□ 0.32
EDC3-217ENST00000569606 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
EDC3-217ENST00000569606 USP31Q70CQ4 1352 aa17.02■□□□□ 0.31
EDC3-217ENST00000569606 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
EDC3-217ENST00000569606 PHLPP1O60346 1717 aa17■□□□□ 0.31
EDC3-217ENST00000569606 TNS3Q68CZ2 1445 aa17■□□□□ 0.31
EDC3-217ENST00000569606 MORC1Q86VD1 984 aa17■□□□□ 0.31
EDC3-217ENST00000569606 SPATA31A3Q5VYP0 1347 aa16.99■□□□□ 0.31
EDC3-217ENST00000569606 ABTB2Q8N961 1025 aa16.99■□□□□ 0.31
EDC3-217ENST00000569606 COG3Q96JB2 828 aa16.99■□□□□ 0.31
EDC3-217ENST00000569606 COL16A1Q07092 1604 aaPredicted RBP16.98■□□□□ 0.31
EDC3-217ENST00000569606 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
EDC3-217ENST00000569606 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
EDC3-217ENST00000569606 CRYBG1Q9Y4K1 1723 aa16.97■□□□□ 0.31
EDC3-217ENST00000569606 NLRP6P59044 892 aa16.97■□□□□ 0.31
EDC3-217ENST00000569606 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.31
EDC3-217ENST00000569606 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
EDC3-217ENST00000569606 SLIT3O75094 1523 aa16.96■□□□□ 0.3
EDC3-217ENST00000569606 ARHGEF10O15013 1369 aa16.95■□□□□ 0.3
EDC3-217ENST00000569606 PPP2R1AP30153 589 aa16.95■□□□□ 0.3
EDC3-217ENST00000569606 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
EDC3-217ENST00000569606 NLRP13Q86W25 1043 aa16.95■□□□□ 0.3
EDC3-217ENST00000569606 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
EDC3-217ENST00000569606 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
EDC3-217ENST00000569606 TNNT2P45379 298 aaPredicted RBP16.94■□□□□ 0.3
EDC3-217ENST00000569606 USP19O94966 1318 aa16.94■□□□□ 0.3
EDC3-217ENST00000569606 AATKQ6ZMQ8 1374 aa16.93■□□□□ 0.3
EDC3-217ENST00000569606 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
EDC3-217ENST00000569606 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
EDC3-217ENST00000569606 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
EDC3-217ENST00000569606 NFAT5O94916 1531 aa16.91■□□□□ 0.3
EDC3-217ENST00000569606 CCER2I3L3R5 266 aa16.91■□□□□ 0.3
EDC3-217ENST00000569606 FBLN1P23142 703 aa16.91■□□□□ 0.3
EDC3-217ENST00000569606 LTN1O94822 1766 aa16.89■□□□□ 0.3
EDC3-217ENST00000569606 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
EDC3-217ENST00000569606 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
EDC3-217ENST00000569606 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.29
EDC3-217ENST00000569606 PEAK1Q9H792 1746 aa16.88■□□□□ 0.29
EDC3-217ENST00000569606 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
EDC3-217ENST00000569606 POLKQ9UBT6 870 aa16.88■□□□□ 0.29
EDC3-217ENST00000569606 SOX12O15370 315 aa16.87■□□□□ 0.29
EDC3-217ENST00000569606 GCP02774 474 aa16.87■□□□□ 0.29
EDC3-217ENST00000569606 MTHFSP49914 203 aa16.87■□□□□ 0.29
EDC3-217ENST00000569606 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
EDC3-217ENST00000569606 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
EDC3-217ENST00000569606 FBXO41Q8TF61 875 aa16.87■□□□□ 0.29
EDC3-217ENST00000569606 SHPRHQ149N8 1683 aa16.87■□□□□ 0.29
EDC3-217ENST00000569606 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
EDC3-217ENST00000569606 EMILIN1Q9Y6C2 1016 aa16.86■□□□□ 0.29
EDC3-217ENST00000569606 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
EDC3-217ENST00000569606 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
EDC3-217ENST00000569606 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
EDC3-217ENST00000569606 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
EDC3-217ENST00000569606 KIF24Q5T7B8 1368 aa16.83■□□□□ 0.28
EDC3-217ENST00000569606 INSRP06213 1382 aa16.82■□□□□ 0.28
EDC3-217ENST00000569606 HSPA1LP34931 641 aa16.82■□□□□ 0.28
EDC3-217ENST00000569606 ARHGEF25Q86VW2 580 aa16.82■□□□□ 0.28
EDC3-217ENST00000569606 COL18A1P39060 1754 aa16.82■□□□□ 0.28
EDC3-217ENST00000569606 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
EDC3-217ENST00000569606 CPDO75976 1380 aa16.81■□□□□ 0.28
EDC3-217ENST00000569606 FLT4P35916 1363 aa16.81■□□□□ 0.28
EDC3-217ENST00000569606 JCADQ9P266 1359 aa16.81■□□□□ 0.28
EDC3-217ENST00000569606 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
EDC3-217ENST00000569606 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
EDC3-217ENST00000569606 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
EDC3-217ENST00000569606 RGPD5Q99666 1765 aa16.79■□□□□ 0.28
EDC3-217ENST00000569606 HOXC9P31274 260 aa16.79■□□□□ 0.28
EDC3-217ENST00000569606 AMPHP49418 695 aa16.79■□□□□ 0.28
EDC3-217ENST00000569606 ABCC6O95255 1503 aa16.79■□□□□ 0.28
EDC3-217ENST00000569606 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
EDC3-217ENST00000569606 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms