RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 FAM83GA6ND36 823 aa13.21□□□□□ -0.29
UBR1-210ENST00000569337 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
UBR1-210ENST00000569337 BCL9LQ86UU0 1499 aa13.21□□□□□ -0.3
UBR1-210ENST00000569337 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.3
UBR1-210ENST00000569337 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
UBR1-210ENST00000569337 GJD4Q96KN9 370 aaPredicted RBP13.2□□□□□ -0.3
UBR1-210ENST00000569337 ATRNO75882 1429 aa13.2□□□□□ -0.3
UBR1-210ENST00000569337 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
UBR1-210ENST00000569337 USP47Q96K76 1375 aa13.19□□□□□ -0.3
UBR1-210ENST00000569337 SLIT2O94813 1529 aa13.18□□□□□ -0.3
UBR1-210ENST00000569337 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
UBR1-210ENST00000569337 NLRP13Q86W25 1043 aa13.18□□□□□ -0.3
UBR1-210ENST00000569337 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
UBR1-210ENST00000569337 CCDC9Q9Y3X0 531 aaKnown RBP13.18□□□□□ -0.3
UBR1-210ENST00000569337 BRD4O60885 1362 aaPredicted RBP13.18□□□□□ -0.3
UBR1-210ENST00000569337 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
UBR1-210ENST00000569337 SBNO2Q9Y2G9 1366 aa13.18□□□□□ -0.3
UBR1-210ENST00000569337 TRPM3Q9HCF6 1732 aaPredicted RBP13.17□□□□□ -0.3
UBR1-210ENST00000569337 RGS12O14924 1447 aa13.17□□□□□ -0.3
UBR1-210ENST00000569337 HSPA5P11021 654 aaKnown RBP13.17□□□□□ -0.3
UBR1-210ENST00000569337 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
UBR1-210ENST00000569337 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
UBR1-210ENST00000569337 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
UBR1-210ENST00000569337 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
UBR1-210ENST00000569337 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
UBR1-210ENST00000569337 VPS72Q15906 364 aa13.16□□□□□ -0.3
UBR1-210ENST00000569337 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.3
UBR1-210ENST00000569337 NLRP6P59044 892 aa13.15□□□□□ -0.3
UBR1-210ENST00000569337 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
UBR1-210ENST00000569337 ALS2Q96Q42 1657 aa13.15□□□□□ -0.31
UBR1-210ENST00000569337 USP6P35125 1406 aa13.14□□□□□ -0.31
UBR1-210ENST00000569337 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBR1-210ENST00000569337 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
UBR1-210ENST00000569337 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
UBR1-210ENST00000569337 GCP02774 474 aa13.13□□□□□ -0.31
UBR1-210ENST00000569337 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
UBR1-210ENST00000569337 TESK2Q96S53 571 aa13.13□□□□□ -0.31
UBR1-210ENST00000569337 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
UBR1-210ENST00000569337 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
UBR1-210ENST00000569337 USP19O94966 1318 aa13.12□□□□□ -0.31
UBR1-210ENST00000569337 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
UBR1-210ENST00000569337 KTN1Q86UP2 1357 aaKnown RBP13.11□□□□□ -0.31
UBR1-210ENST00000569337 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
UBR1-210ENST00000569337 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
UBR1-210ENST00000569337 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
UBR1-210ENST00000569337 A0A0G2JS52 829 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 EVA1CP58658 441 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 MYT1Q01538 1121 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 STRN4Q9NRL3 753 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
UBR1-210ENST00000569337 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
UBR1-210ENST00000569337 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
UBR1-210ENST00000569337 C11orf95C9JLR9 678 aaPredicted RBP13.09□□□□□ -0.31
UBR1-210ENST00000569337 ONECUT3O60422 494 aaPredicted RBP13.09□□□□□ -0.31
UBR1-210ENST00000569337 TMF1P82094 1093 aa13.09□□□□□ -0.31
UBR1-210ENST00000569337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBR1-210ENST00000569337 CPDO75976 1380 aa13.08□□□□□ -0.31
UBR1-210ENST00000569337 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
UBR1-210ENST00000569337 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
UBR1-210ENST00000569337 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
UBR1-210ENST00000569337 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
UBR1-210ENST00000569337 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
UBR1-210ENST00000569337 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
UBR1-210ENST00000569337 GLI3P10071 1580 aa13.07□□□□□ -0.32
UBR1-210ENST00000569337 PLCH1Q4KWH8 1693 aa13.06□□□□□ -0.32
UBR1-210ENST00000569337 NWD2Q9ULI1 1742 aa13.06□□□□□ -0.32
UBR1-210ENST00000569337 SOX12O15370 315 aa13.06□□□□□ -0.32
UBR1-210ENST00000569337 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
UBR1-210ENST00000569337 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
UBR1-210ENST00000569337 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
UBR1-210ENST00000569337 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
UBR1-210ENST00000569337 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
UBR1-210ENST00000569337 CRYBG1Q9Y4K1 1723 aa13.05□□□□□ -0.32
UBR1-210ENST00000569337 PHRF1Q9P1Y6 1649 aaKnown RBP13.04□□□□□ -0.32
UBR1-210ENST00000569337 LARP1Q6PKG0 1096 aaKnown RBP13.04□□□□□ -0.32
UBR1-210ENST00000569337 NME9Q86XW9 330 aa13.04□□□□□ -0.32
UBR1-210ENST00000569337 CCDC125Q86Z20 511 aa13.04□□□□□ -0.32
UBR1-210ENST00000569337 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
UBR1-210ENST00000569337 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
UBR1-210ENST00000569337 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
UBR1-210ENST00000569337 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
UBR1-210ENST00000569337 A0A1W2PP64 1363 aa13.03□□□□□ -0.32
UBR1-210ENST00000569337 AATKQ6ZMQ8 1374 aa13.03□□□□□ -0.32
UBR1-210ENST00000569337 EDC4Q6P2E9 1401 aaKnown RBP13.03□□□□□ -0.32
UBR1-210ENST00000569337 KIF7Q2M1P5 1343 aa13.02□□□□□ -0.33
UBR1-210ENST00000569337 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
UBR1-210ENST00000569337 USP31Q70CQ4 1352 aa13.02□□□□□ -0.33
UBR1-210ENST00000569337 SLIT3O75094 1523 aa13.02□□□□□ -0.33
UBR1-210ENST00000569337 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.33
UBR1-210ENST00000569337 TCP11L2Q8N4U5 519 aa13.01□□□□□ -0.33
UBR1-210ENST00000569337 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
UBR1-210ENST00000569337 NRAPQ86VF7 1730 aa13.01□□□□□ -0.33
UBR1-210ENST00000569337 PIK3C2AO00443 1686 aa13□□□□□ -0.33
UBR1-210ENST00000569337 MYOM1P52179 1685 aa13□□□□□ -0.33
UBR1-210ENST00000569337 CCDC7Q96M83 1385 aa13□□□□□ -0.33
UBR1-210ENST00000569337 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
UBR1-210ENST00000569337 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms