RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 NSD3Q9BZ95 1437 aa12.78□□□□□ -0.36
LINC00555-201ENST00000569288 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
LINC00555-201ENST00000569288 CC2D1BQ5T0F9 858 aaKnown RBP12.77□□□□□ -0.37
LINC00555-201ENST00000569288 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
LINC00555-201ENST00000569288 A0A1W2PP64 1363 aa12.77□□□□□ -0.37
LINC00555-201ENST00000569288 FYB1O15117 783 aa12.76□□□□□ -0.37
LINC00555-201ENST00000569288 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
LINC00555-201ENST00000569288 ORAI2Q96SN7 254 aa12.76□□□□□ -0.37
LINC00555-201ENST00000569288 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
LINC00555-201ENST00000569288 AKAP12Q02952 1782 aa12.75□□□□□ -0.37
LINC00555-201ENST00000569288 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
LINC00555-201ENST00000569288 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
LINC00555-201ENST00000569288 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
LINC00555-201ENST00000569288 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
LINC00555-201ENST00000569288 NPHP3Q7Z494 1330 aa12.74□□□□□ -0.37
LINC00555-201ENST00000569288 TTC21AQ8NDW8 1320 aa12.74□□□□□ -0.37
LINC00555-201ENST00000569288 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
LINC00555-201ENST00000569288 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
LINC00555-201ENST00000569288 PXDNQ92626 1479 aa12.73□□□□□ -0.37
LINC00555-201ENST00000569288 AATKQ6ZMQ8 1374 aa12.73□□□□□ -0.37
LINC00555-201ENST00000569288 ZBED9Q6R2W3 1325 aa12.73□□□□□ -0.37
LINC00555-201ENST00000569288 HSPA1LP34931 641 aa12.73□□□□□ -0.37
LINC00555-201ENST00000569288 CCDC184Q52MB2 194 aa12.73□□□□□ -0.37
LINC00555-201ENST00000569288 CFAP53Q96M91 514 aa12.72□□□□□ -0.37
LINC00555-201ENST00000569288 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
LINC00555-201ENST00000569288 SSH2Q76I76 1423 aa12.71□□□□□ -0.37
LINC00555-201ENST00000569288 NUTM2FA1L443 756 aa12.71□□□□□ -0.37
LINC00555-201ENST00000569288 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
LINC00555-201ENST00000569288 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.38
LINC00555-201ENST00000569288 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
LINC00555-201ENST00000569288 PNPLA6Q8IY17 1366 aa12.7□□□□□ -0.38
LINC00555-201ENST00000569288 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
LINC00555-201ENST00000569288 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
LINC00555-201ENST00000569288 USP31Q70CQ4 1352 aa12.69□□□□□ -0.38
LINC00555-201ENST00000569288 ACEP12821 1306 aa12.69□□□□□ -0.38
LINC00555-201ENST00000569288 FOXO3O43524 673 aa12.69□□□□□ -0.38
LINC00555-201ENST00000569288 PSME1Q06323 249 aa12.69□□□□□ -0.38
LINC00555-201ENST00000569288 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
LINC00555-201ENST00000569288 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
LINC00555-201ENST00000569288 JCADQ9P266 1359 aa12.69□□□□□ -0.38
LINC00555-201ENST00000569288 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
LINC00555-201ENST00000569288 USP6P35125 1406 aa12.68□□□□□ -0.38
LINC00555-201ENST00000569288 HNRNPUQ00839 825 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00555-201ENST00000569288 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00555-201ENST00000569288 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
LINC00555-201ENST00000569288 PMFBP1Q8TBY8 1022 aa12.67□□□□□ -0.38
LINC00555-201ENST00000569288 COG3Q96JB2 828 aa12.67□□□□□ -0.38
LINC00555-201ENST00000569288 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
LINC00555-201ENST00000569288 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
LINC00555-201ENST00000569288 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
LINC00555-201ENST00000569288 KIF24Q5T7B8 1368 aa12.67□□□□□ -0.38
LINC00555-201ENST00000569288 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
LINC00555-201ENST00000569288 CRYBG1Q9Y4K1 1723 aa12.66□□□□□ -0.38
LINC00555-201ENST00000569288 MTHFSP49914 203 aa12.66□□□□□ -0.38
LINC00555-201ENST00000569288 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
LINC00555-201ENST00000569288 USP54Q70EL1 1684 aa12.66□□□□□ -0.38
LINC00555-201ENST00000569288 SPATA31A6Q5VVP1 1343 aa12.65□□□□□ -0.38
LINC00555-201ENST00000569288 SPATA31A3Q5VYP0 1347 aa12.65□□□□□ -0.38
LINC00555-201ENST00000569288 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
LINC00555-201ENST00000569288 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
LINC00555-201ENST00000569288 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
LINC00555-201ENST00000569288 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
LINC00555-201ENST00000569288 ADAMTS8Q9UP79 889 aa12.64□□□□□ -0.39
LINC00555-201ENST00000569288 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
LINC00555-201ENST00000569288 ARHGEF10O15013 1369 aa12.64□□□□□ -0.39
LINC00555-201ENST00000569288 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
LINC00555-201ENST00000569288 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
LINC00555-201ENST00000569288 GGNBP2Q9H3C7 697 aa12.63□□□□□ -0.39
LINC00555-201ENST00000569288 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
LINC00555-201ENST00000569288 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
LINC00555-201ENST00000569288 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
LINC00555-201ENST00000569288 PIK3C2AO00443 1686 aa12.61□□□□□ -0.39
LINC00555-201ENST00000569288 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
LINC00555-201ENST00000569288 FCHSD2O94868 740 aa12.6□□□□□ -0.39
LINC00555-201ENST00000569288 CCDC27Q2M243 656 aa12.6□□□□□ -0.39
LINC00555-201ENST00000569288 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
LINC00555-201ENST00000569288 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
LINC00555-201ENST00000569288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00555-201ENST00000569288 RUNDC1Q96C34 613 aa12.59□□□□□ -0.39
LINC00555-201ENST00000569288 KIF20BQ96Q89 1820 aa12.58□□□□□ -0.4
LINC00555-201ENST00000569288 NME9Q86XW9 330 aa12.58□□□□□ -0.4
LINC00555-201ENST00000569288 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
LINC00555-201ENST00000569288 CNGB1Q14028 1251 aaPredicted RBP12.57□□□□□ -0.4
LINC00555-201ENST00000569288 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
LINC00555-201ENST00000569288 LRP6O75581 1613 aa12.57□□□□□ -0.4
LINC00555-201ENST00000569288 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
LINC00555-201ENST00000569288 SLIT3O75094 1523 aa12.57□□□□□ -0.4
LINC00555-201ENST00000569288 PHF23Q9BUL5 403 aaPredicted RBP12.56□□□□□ -0.4
LINC00555-201ENST00000569288 USP19O94966 1318 aa12.56□□□□□ -0.4
LINC00555-201ENST00000569288 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
LINC00555-201ENST00000569288 NWD2Q9ULI1 1742 aa12.55□□□□□ -0.4
LINC00555-201ENST00000569288 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
LINC00555-201ENST00000569288 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
LINC00555-201ENST00000569288 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
LINC00555-201ENST00000569288 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
LINC00555-201ENST00000569288 IL13P35225 146 aa12.54□□□□□ -0.4
LINC00555-201ENST00000569288 NLRP6P59044 892 aa12.54□□□□□ -0.4
LINC00555-201ENST00000569288 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
LINC00555-201ENST00000569288 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
LINC00555-201ENST00000569288 RTL1A6NKG5 1358 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms