RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 ZRANB1Q9UGI0 708 aa19.85■□□□□ 0.77
CNOT1-215ENST00000569020 ATP7BP35670 1465 aa19.85■□□□□ 0.77
CNOT1-215ENST00000569020 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
CNOT1-215ENST00000569020 ONECUT3O60422 494 aaPredicted RBP19.83■□□□□ 0.77
CNOT1-215ENST00000569020 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
CNOT1-215ENST00000569020 BTG4Q9NY30 223 aa19.83■□□□□ 0.77
CNOT1-215ENST00000569020 TOPAZ1Q8N9V7 1692 aa19.82■□□□□ 0.76
CNOT1-215ENST00000569020 A0A0G2JS52 829 aa19.81■□□□□ 0.76
CNOT1-215ENST00000569020 MYT1Q01538 1121 aa19.81■□□□□ 0.76
CNOT1-215ENST00000569020 SF3B2Q13435 895 aaKnown RBP19.81■□□□□ 0.76
CNOT1-215ENST00000569020 KRT27Q7Z3Y8 459 aa19.81■□□□□ 0.76
CNOT1-215ENST00000569020 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
CNOT1-215ENST00000569020 EP400Q96L91 3159 aa19.81■□□□□ 0.76
CNOT1-215ENST00000569020 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
CNOT1-215ENST00000569020 FAM98CQ17RN3 349 aaKnown RBP19.77■□□□□ 0.76
CNOT1-215ENST00000569020 PRDM11Q9NQV5 511 aa19.77■□□□□ 0.76
CNOT1-215ENST00000569020 CCDC61Q9Y6R9 512 aa19.77■□□□□ 0.76
CNOT1-215ENST00000569020 POLR3AO14802 1390 aaPredicted RBP19.76■□□□□ 0.75
CNOT1-215ENST00000569020 NBPF1Q3BBV0 1214 aa19.75■□□□□ 0.75
CNOT1-215ENST00000569020 ACEP12821 1306 aa19.75■□□□□ 0.75
CNOT1-215ENST00000569020 DEFB132Q7Z7B7 95 aa19.74■□□□□ 0.75
CNOT1-215ENST00000569020 QRICH2Q9H0J4 1663 aa19.74■□□□□ 0.75
CNOT1-215ENST00000569020 SPATA31A5Q5VU36 1347 aa19.74■□□□□ 0.75
CNOT1-215ENST00000569020 SPATA31A7Q8IWB4 1347 aa19.74■□□□□ 0.75
CNOT1-215ENST00000569020 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
CNOT1-215ENST00000569020 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
CNOT1-215ENST00000569020 KIAA0232Q92628 1395 aa19.72■□□□□ 0.75
CNOT1-215ENST00000569020 RGPD1P0DJD0 1748 aa19.72■□□□□ 0.75
CNOT1-215ENST00000569020 CENPJQ9HC77 1338 aaPredicted RBP19.72■□□□□ 0.75
CNOT1-215ENST00000569020 THSD7AQ9UPZ6 1657 aa19.71■□□□□ 0.75
CNOT1-215ENST00000569020 SRPK2P78362 688 aaKnown RBP19.71■□□□□ 0.75
CNOT1-215ENST00000569020 NUTM2GQ5VZR2 741 aa19.71■□□□□ 0.75
CNOT1-215ENST00000569020 PIAS4Q8N2W9 510 aaPredicted RBP19.71■□□□□ 0.75
CNOT1-215ENST00000569020 ZC3H6P61129 1189 aaKnown RBP19.7■□□□□ 0.74
CNOT1-215ENST00000569020 ABTB2Q8N961 1025 aa19.7■□□□□ 0.74
CNOT1-215ENST00000569020 PPIP5K1Q6PFW1 1433 aa19.69■□□□□ 0.74
CNOT1-215ENST00000569020 BAG6P46379 1132 aa19.69■□□□□ 0.74
CNOT1-215ENST00000569020 CHRNA2Q15822 529 aa19.69■□□□□ 0.74
CNOT1-215ENST00000569020 NRKQ7Z2Y5 1582 aa19.69■□□□□ 0.74
CNOT1-215ENST00000569020 STRN4Q9NRL3 753 aa19.68■□□□□ 0.74
CNOT1-215ENST00000569020 TRPM1Q7Z4N2 1603 aa19.67■□□□□ 0.74
CNOT1-215ENST00000569020 SPATA31A1Q5TZJ5 1347 aa19.67■□□□□ 0.74
CNOT1-215ENST00000569020 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
CNOT1-215ENST00000569020 CABP2Q9NPB3 220 aa19.66■□□□□ 0.74
CNOT1-215ENST00000569020 EVA1CP58658 441 aa19.65■□□□□ 0.74
CNOT1-215ENST00000569020 NLRP13Q86W25 1043 aa19.65■□□□□ 0.74
CNOT1-215ENST00000569020 FAM182BQ5T319 152 aa19.64■□□□□ 0.73
CNOT1-215ENST00000569020 BRD4O60885 1362 aaPredicted RBP19.64■□□□□ 0.73
CNOT1-215ENST00000569020 LMO7Q8WWI1 1683 aa19.64■□□□□ 0.73
CNOT1-215ENST00000569020 TNS1Q9HBL0 1735 aaKnown RBP19.64■□□□□ 0.73
CNOT1-215ENST00000569020 CAMTA1Q9Y6Y1 1673 aa19.62■□□□□ 0.73
CNOT1-215ENST00000569020 SSH2Q76I76 1423 aa19.62■□□□□ 0.73
CNOT1-215ENST00000569020 CPDO75976 1380 aa19.62■□□□□ 0.73
CNOT1-215ENST00000569020 USP19O94966 1318 aa19.62■□□□□ 0.73
CNOT1-215ENST00000569020 USP35Q9P2H5 1018 aa19.62■□□□□ 0.73
CNOT1-215ENST00000569020 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
CNOT1-215ENST00000569020 EVC2Q86UK5 1308 aa19.6■□□□□ 0.73
CNOT1-215ENST00000569020 GCP02774 474 aa19.6■□□□□ 0.73
CNOT1-215ENST00000569020 BARGINQ6ZT62 677 aa19.6■□□□□ 0.73
CNOT1-215ENST00000569020 CABP1Q9NZU7 370 aa19.6■□□□□ 0.73
CNOT1-215ENST00000569020 USP6P35125 1406 aa19.59■□□□□ 0.73
CNOT1-215ENST00000569020 EN1Q05925 392 aaPredicted RBP19.59■□□□□ 0.73
CNOT1-215ENST00000569020 NEUROD1Q13562 356 aa19.59■□□□□ 0.73
CNOT1-215ENST00000569020 FAM196AQ6ZSG2 479 aa19.59■□□□□ 0.73
CNOT1-215ENST00000569020 ROCK2O75116 1388 aaKnown RBP19.58■□□□□ 0.73
CNOT1-215ENST00000569020 LRP5O75197 1615 aa19.58■□□□□ 0.72
CNOT1-215ENST00000569020 PDE3BQ13370 1112 aa19.57■□□□□ 0.72
CNOT1-215ENST00000569020 LARP1Q6PKG0 1096 aaKnown RBP19.57■□□□□ 0.72
CNOT1-215ENST00000569020 DISP2A7MBM2 1401 aa19.57■□□□□ 0.72
CNOT1-215ENST00000569020 NLRP6P59044 892 aa19.56■□□□□ 0.72
CNOT1-215ENST00000569020 TCP11L2Q8N4U5 519 aa19.56■□□□□ 0.72
CNOT1-215ENST00000569020 THRAP3Q9Y2W1 955 aaKnown RBP19.56■□□□□ 0.72
CNOT1-215ENST00000569020 AKAP12Q02952 1782 aa19.56■□□□□ 0.72
CNOT1-215ENST00000569020 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
CNOT1-215ENST00000569020 COL5A2P05997 1499 aaPredicted RBP19.55■□□□□ 0.72
CNOT1-215ENST00000569020 PSDA5PKW4 1024 aaPredicted RBP19.55■□□□□ 0.72
CNOT1-215ENST00000569020 TRIM37O94972 964 aa19.55■□□□□ 0.72
CNOT1-215ENST00000569020 SLIT3O75094 1523 aa19.55■□□□□ 0.72
CNOT1-215ENST00000569020 PARP4Q9UKK3 1724 aaKnown RBP19.54■□□□□ 0.72
CNOT1-215ENST00000569020 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
CNOT1-215ENST00000569020 CRB1P82279 1406 aa19.52■□□□□ 0.72
CNOT1-215ENST00000569020 EZH2Q15910 746 aaKnown RBP19.52■□□□□ 0.72
CNOT1-215ENST00000569020 ZNF692Q9BU19 519 aaPredicted RBP19.52■□□□□ 0.72
CNOT1-215ENST00000569020 APBA3O96018 575 aa19.51■□□□□ 0.71
CNOT1-215ENST00000569020 COL18A1P39060 1754 aa19.5■□□□□ 0.71
CNOT1-215ENST00000569020 AATKQ6ZMQ8 1374 aa19.5■□□□□ 0.71
CNOT1-215ENST00000569020 RGPD5Q99666 1765 aa19.49■□□□□ 0.71
CNOT1-215ENST00000569020 PARD3Q8TEW0 1356 aa19.49■□□□□ 0.71
CNOT1-215ENST00000569020 CAMKK2Q96RR4 588 aa19.49■□□□□ 0.71
CNOT1-215ENST00000569020 RREB1Q92766 1687 aa19.49■□□□□ 0.71
CNOT1-215ENST00000569020 WNK3Q9BYP7 1800 aa19.48■□□□□ 0.71
CNOT1-215ENST00000569020 R3HDM1Q15032 1099 aaKnown RBP19.48■□□□□ 0.71
CNOT1-215ENST00000569020 TTC21BQ7Z4L5 1316 aa19.48■□□□□ 0.71
CNOT1-215ENST00000569020 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
CNOT1-215ENST00000569020 C11orf95C9JLR9 678 aaPredicted RBP19.47■□□□□ 0.71
CNOT1-215ENST00000569020 KCNH5Q8NCM2 988 aa19.47■□□□□ 0.71
CNOT1-215ENST00000569020 MON2Q7Z3U7 1717 aa19.47■□□□□ 0.71
CNOT1-215ENST00000569020 TTC21AQ8NDW8 1320 aa19.47■□□□□ 0.71
CNOT1-215ENST00000569020 TOM1L2Q6ZVM7 507 aa19.46■□□□□ 0.71
CNOT1-215ENST00000569020 LRRC37A3O60309 1634 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms