RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 ROCK2O75116 1388 aaKnown RBP26.17■■□□□ 1.78
SYNGR3-205ENST00000568896 BRWD3Q6RI45 1802 aa26.16■■□□□ 1.78
SYNGR3-205ENST00000568896 KRT27Q7Z3Y8 459 aa26.15■■□□□ 1.78
SYNGR3-205ENST00000568896 BTG4Q9NY30 223 aa26.15■■□□□ 1.78
SYNGR3-205ENST00000568896 PLCH1Q4KWH8 1693 aa26.15■■□□□ 1.78
SYNGR3-205ENST00000568896 GPRASP1Q5JY77 1395 aa26.14■■□□□ 1.78
SYNGR3-205ENST00000568896 ABCA3Q99758 1704 aa26.14■■□□□ 1.77
SYNGR3-205ENST00000568896 A0A0G2JS52 829 aa26.12■■□□□ 1.77
SYNGR3-205ENST00000568896 MYT1Q01538 1121 aa26.12■■□□□ 1.77
SYNGR3-205ENST00000568896 SF3B2Q13435 895 aaKnown RBP26.12■■□□□ 1.77
SYNGR3-205ENST00000568896 FAM98CQ17RN3 349 aaKnown RBP26.12■■□□□ 1.77
SYNGR3-205ENST00000568896 NGDNQ8NEJ9 315 aaKnown RBP26.12■■□□□ 1.77
SYNGR3-205ENST00000568896 NWD2Q9ULI1 1742 aa26.11■■□□□ 1.77
SYNGR3-205ENST00000568896 TRPM3Q9HCF6 1732 aaPredicted RBP26.11■■□□□ 1.77
SYNGR3-205ENST00000568896 PAK3O75914 559 aaPredicted RBP26.1■■□□□ 1.77
SYNGR3-205ENST00000568896 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
SYNGR3-205ENST00000568896 EIF3AQ14152 1382 aaKnown RBP26.09■■□□□ 1.77
SYNGR3-205ENST00000568896 TIMELESSQ9UNS1 1208 aa26.07■■□□□ 1.76
SYNGR3-205ENST00000568896 CENPJQ9HC77 1338 aaPredicted RBP26.07■■□□□ 1.76
SYNGR3-205ENST00000568896 NUDT16Q96DE0 195 aaKnown RBP26.06■■□□□ 1.76
SYNGR3-205ENST00000568896 ALS2Q96Q42 1657 aa26.06■■□□□ 1.76
SYNGR3-205ENST00000568896 QRICH2Q9H0J4 1663 aa26.04■■□□□ 1.76
SYNGR3-205ENST00000568896 FAM182BQ5T319 152 aa26.04■■□□□ 1.76
SYNGR3-205ENST00000568896 NRAPQ86VF7 1730 aa26.04■■□□□ 1.76
SYNGR3-205ENST00000568896 CARD11Q9BXL7 1154 aa26.03■■□□□ 1.76
SYNGR3-205ENST00000568896 CDK19Q9BWU1 502 aa26.02■■□□□ 1.76
SYNGR3-205ENST00000568896 PRDM11Q9NQV5 511 aa26.02■■□□□ 1.76
SYNGR3-205ENST00000568896 SPATA31A5Q5VU36 1347 aa26.02■■□□□ 1.76
SYNGR3-205ENST00000568896 SPATA31A7Q8IWB4 1347 aa26.02■■□□□ 1.76
SYNGR3-205ENST00000568896 COL14A1Q05707 1796 aaKnown RBP26■■□□□ 1.75
SYNGR3-205ENST00000568896 NUTM2GQ5VZR2 741 aa26■■□□□ 1.75
SYNGR3-205ENST00000568896 ATP7BP35670 1465 aa25.99■■□□□ 1.75
SYNGR3-205ENST00000568896 CHRNA2Q15822 529 aa25.99■■□□□ 1.75
SYNGR3-205ENST00000568896 KIAA0232Q92628 1395 aa25.97■■□□□ 1.75
SYNGR3-205ENST00000568896 PSDA5PKW4 1024 aaPredicted RBP25.97■■□□□ 1.75
SYNGR3-205ENST00000568896 BAG6P46379 1132 aa25.97■■□□□ 1.75
SYNGR3-205ENST00000568896 ZC3H6P61129 1189 aaKnown RBP25.96■■□□□ 1.75
SYNGR3-205ENST00000568896 EN1Q05925 392 aaPredicted RBP25.95■■□□□ 1.74
SYNGR3-205ENST00000568896 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
SYNGR3-205ENST00000568896 ACEP12821 1306 aa25.94■■□□□ 1.74
SYNGR3-205ENST00000568896 STRN4Q9NRL3 753 aa25.94■■□□□ 1.74
SYNGR3-205ENST00000568896 SPATA31A1Q5TZJ5 1347 aa25.92■■□□□ 1.74
SYNGR3-205ENST00000568896 CCDC61Q9Y6R9 512 aa25.92■■□□□ 1.74
SYNGR3-205ENST00000568896 ITSN1Q15811 1721 aa25.91■■□□□ 1.74
SYNGR3-205ENST00000568896 TOPAZ1Q8N9V7 1692 aa25.9■■□□□ 1.74
SYNGR3-205ENST00000568896 PLEKHG3A1L390 1219 aa25.9■■□□□ 1.74
SYNGR3-205ENST00000568896 POLR3AO14802 1390 aaPredicted RBP25.9■■□□□ 1.74
SYNGR3-205ENST00000568896 SBNO2Q9Y2G9 1366 aa25.9■■□□□ 1.74
SYNGR3-205ENST00000568896 SRPK2P78362 688 aaKnown RBP25.89■■□□□ 1.74
SYNGR3-205ENST00000568896 USP35Q9P2H5 1018 aa25.88■■□□□ 1.73
SYNGR3-205ENST00000568896 EVC2Q86UK5 1308 aa25.88■■□□□ 1.73
SYNGR3-205ENST00000568896 THSD7AQ9UPZ6 1657 aa25.87■■□□□ 1.73
SYNGR3-205ENST00000568896 ABTB2Q8N961 1025 aa25.87■■□□□ 1.73
SYNGR3-205ENST00000568896 CABP2Q9NPB3 220 aa25.87■■□□□ 1.73
SYNGR3-205ENST00000568896 EVA1CP58658 441 aa25.86■■□□□ 1.73
SYNGR3-205ENST00000568896 TRIM37O94972 964 aa25.84■■□□□ 1.73
SYNGR3-205ENST00000568896 EZH2Q15910 746 aaKnown RBP25.84■■□□□ 1.73
SYNGR3-205ENST00000568896 PHRF1Q9P1Y6 1649 aaKnown RBP25.84■■□□□ 1.73
SYNGR3-205ENST00000568896 USP47Q96K76 1375 aa25.83■■□□□ 1.73
SYNGR3-205ENST00000568896 R3HDM1Q15032 1099 aaKnown RBP25.83■■□□□ 1.73
SYNGR3-205ENST00000568896 LARP1Q6PKG0 1096 aaKnown RBP25.83■■□□□ 1.73
SYNGR3-205ENST00000568896 PPIP5K1Q6PFW1 1433 aa25.81■■□□□ 1.72
SYNGR3-205ENST00000568896 ST20-MTHFSA0A0A6YYL1 179 aa25.81■■□□□ 1.72
SYNGR3-205ENST00000568896 FAM196AQ6ZSG2 479 aa25.81■■□□□ 1.72
SYNGR3-205ENST00000568896 SSH2Q76I76 1423 aa25.8■■□□□ 1.72
SYNGR3-205ENST00000568896 RGPD1P0DJD0 1748 aa25.8■■□□□ 1.72
SYNGR3-205ENST00000568896 BARGINQ6ZT62 677 aa25.79■■□□□ 1.72
SYNGR3-205ENST00000568896 CAMKK2Q96RR4 588 aa25.79■■□□□ 1.72
SYNGR3-205ENST00000568896 CAMTA1Q9Y6Y1 1673 aa25.79■■□□□ 1.72
SYNGR3-205ENST00000568896 USP19O94966 1318 aa25.79■■□□□ 1.72
SYNGR3-205ENST00000568896 DISP2A7MBM2 1401 aa25.79■■□□□ 1.72
SYNGR3-205ENST00000568896 TESK2Q96S53 571 aa25.78■■□□□ 1.72
SYNGR3-205ENST00000568896 LRP5O75197 1615 aa25.77■■□□□ 1.72
SYNGR3-205ENST00000568896 APBA3O96018 575 aa25.77■■□□□ 1.72
SYNGR3-205ENST00000568896 GCP02774 474 aa25.77■■□□□ 1.72
SYNGR3-205ENST00000568896 PDE3BQ13370 1112 aa25.77■■□□□ 1.72
SYNGR3-205ENST00000568896 NLRP13Q86W25 1043 aa25.77■■□□□ 1.72
SYNGR3-205ENST00000568896 TCP11L2Q8N4U5 519 aa25.76■■□□□ 1.71
SYNGR3-205ENST00000568896 CPDO75976 1380 aa25.76■■□□□ 1.71
SYNGR3-205ENST00000568896 NRKQ7Z2Y5 1582 aa25.76■■□□□ 1.71
SYNGR3-205ENST00000568896 CABP1Q9NZU7 370 aa25.75■■□□□ 1.71
SYNGR3-205ENST00000568896 TNS1Q9HBL0 1735 aaKnown RBP25.74■■□□□ 1.71
SYNGR3-205ENST00000568896 ZBTB7CA1YPR0 619 aa25.73■■□□□ 1.71
SYNGR3-205ENST00000568896 NLRP6P59044 892 aa25.7■■□□□ 1.7
SYNGR3-205ENST00000568896 LMO7Q8WWI1 1683 aa25.7■■□□□ 1.7
SYNGR3-205ENST00000568896 SLC24A1O60721 1099 aa25.68■■□□□ 1.7
SYNGR3-205ENST00000568896 THRAP3Q9Y2W1 955 aaKnown RBP25.68■■□□□ 1.7
SYNGR3-205ENST00000568896 USP6P35125 1406 aa25.67■■□□□ 1.7
SYNGR3-205ENST00000568896 PUS7Q96PZ0 661 aaKnown RBP25.67■■□□□ 1.7
SYNGR3-205ENST00000568896 COL5A2P05997 1499 aaPredicted RBP25.66■■□□□ 1.7
SYNGR3-205ENST00000568896 BRD4O60885 1362 aaPredicted RBP25.65■■□□□ 1.7
SYNGR3-205ENST00000568896 TMF1P82094 1093 aa25.64■■□□□ 1.7
SYNGR3-205ENST00000568896 PARD3Q8TEW0 1356 aa25.64■■□□□ 1.69
SYNGR3-205ENST00000568896 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
SYNGR3-205ENST00000568896 AKAP12Q02952 1782 aa25.62■■□□□ 1.69
SYNGR3-205ENST00000568896 CRB1P82279 1406 aa25.62■■□□□ 1.69
SYNGR3-205ENST00000568896 AATKQ6ZMQ8 1374 aa25.61■■□□□ 1.69
SYNGR3-205ENST00000568896 EIF4G2P78344 907 aaKnown RBP eCLIP25.61■■□□□ 1.69
SYNGR3-205ENST00000568896 AXIN2Q9Y2T1 843 aa25.61■■□□□ 1.69
SYNGR3-205ENST00000568896 CD163L1Q9NR16 1453 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms