RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 ALS2Q96Q42 1657 aa14.67□□□□□ -0.06
UBR1-207ENST00000568782 TOPAZ1Q8N9V7 1692 aa14.66□□□□□ -0.06
UBR1-207ENST00000568782 ABTB2Q8N961 1025 aa14.66□□□□□ -0.06
UBR1-207ENST00000568782 POLR3AO14802 1390 aaPredicted RBP14.65□□□□□ -0.06
UBR1-207ENST00000568782 GJD4Q96KN9 370 aaPredicted RBP14.65□□□□□ -0.06
UBR1-207ENST00000568782 CABP1Q9NZU7 370 aa14.65□□□□□ -0.06
UBR1-207ENST00000568782 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.65□□□□□ -0.06
UBR1-207ENST00000568782 ABCA3Q99758 1704 aa14.64□□□□□ -0.07
UBR1-207ENST00000568782 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
UBR1-207ENST00000568782 BRD4O60885 1362 aaPredicted RBP14.64□□□□□ -0.07
UBR1-207ENST00000568782 NLRP13Q86W25 1043 aa14.64□□□□□ -0.07
UBR1-207ENST00000568782 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
UBR1-207ENST00000568782 ATRNO75882 1429 aa14.64□□□□□ -0.07
UBR1-207ENST00000568782 CLSPNQ9HAW4 1339 aa14.64□□□□□ -0.07
UBR1-207ENST00000568782 BCL9LQ86UU0 1499 aa14.63□□□□□ -0.07
UBR1-207ENST00000568782 PRDM11Q9NQV5 511 aa14.63□□□□□ -0.07
UBR1-207ENST00000568782 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
UBR1-207ENST00000568782 ATAD2Q6PL18 1390 aa14.62□□□□□ -0.07
UBR1-207ENST00000568782 PLCH1Q4KWH8 1693 aa14.62□□□□□ -0.07
UBR1-207ENST00000568782 NUTM2GQ5VZR2 741 aa14.62□□□□□ -0.07
UBR1-207ENST00000568782 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
UBR1-207ENST00000568782 SLIT2O94813 1529 aa14.61□□□□□ -0.07
UBR1-207ENST00000568782 COL14A1Q05707 1796 aaKnown RBP14.61□□□□□ -0.07
UBR1-207ENST00000568782 A0A0G2JS52 829 aa14.61□□□□□ -0.07
UBR1-207ENST00000568782 FAM83GA6ND36 823 aa14.61□□□□□ -0.07
UBR1-207ENST00000568782 MYT1Q01538 1121 aa14.61□□□□□ -0.07
UBR1-207ENST00000568782 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
UBR1-207ENST00000568782 RGS12O14924 1447 aa14.6□□□□□ -0.07
UBR1-207ENST00000568782 VPS72Q15906 364 aa14.6□□□□□ -0.07
UBR1-207ENST00000568782 SBNO2Q9Y2G9 1366 aa14.6□□□□□ -0.07
UBR1-207ENST00000568782 EVA1CP58658 441 aa14.59□□□□□ -0.07
UBR1-207ENST00000568782 NLRP6P59044 892 aa14.59□□□□□ -0.07
UBR1-207ENST00000568782 CCER1Q8TC90 406 aaPredicted RBP14.59□□□□□ -0.07
UBR1-207ENST00000568782 TMC1Q8TDI8 760 aa14.59□□□□□ -0.07
UBR1-207ENST00000568782 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.08
UBR1-207ENST00000568782 UPF1Q92900 1129 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBR1-207ENST00000568782 HDGFL2Q7Z4V5 671 aaPredicted RBP14.57□□□□□ -0.08
UBR1-207ENST00000568782 USP6P35125 1406 aa14.57□□□□□ -0.08
UBR1-207ENST00000568782 PHRF1Q9P1Y6 1649 aaKnown RBP14.56□□□□□ -0.08
UBR1-207ENST00000568782 CRYBG1Q9Y4K1 1723 aa14.56□□□□□ -0.08
UBR1-207ENST00000568782 KIAA0232Q92628 1395 aa14.56□□□□□ -0.08
UBR1-207ENST00000568782 AKAP12Q02952 1782 aa14.55□□□□□ -0.08
UBR1-207ENST00000568782 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
UBR1-207ENST00000568782 TERF2IPQ9NYB0 399 aa14.55□□□□□ -0.08
UBR1-207ENST00000568782 TTC21AQ8NDW8 1320 aa14.55□□□□□ -0.08
UBR1-207ENST00000568782 KTN1Q86UP2 1357 aaKnown RBP14.55□□□□□ -0.08
UBR1-207ENST00000568782 ST20-MTHFSA0A0A6YYL1 179 aa14.54□□□□□ -0.08
UBR1-207ENST00000568782 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
UBR1-207ENST00000568782 GCP02774 474 aa14.54□□□□□ -0.08
UBR1-207ENST00000568782 CHRNA2Q15822 529 aa14.54□□□□□ -0.08
UBR1-207ENST00000568782 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
UBR1-207ENST00000568782 PUS7Q96PZ0 661 aaKnown RBP14.54□□□□□ -0.08
UBR1-207ENST00000568782 TMF1P82094 1093 aa14.53□□□□□ -0.08
UBR1-207ENST00000568782 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
UBR1-207ENST00000568782 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
UBR1-207ENST00000568782 SEPT12Q8IYM1 358 aa14.53□□□□□ -0.08
UBR1-207ENST00000568782 KCNH5Q8NCM2 988 aa14.53□□□□□ -0.08
UBR1-207ENST00000568782 GLI3P10071 1580 aa14.52□□□□□ -0.08
UBR1-207ENST00000568782 TTC21BQ7Z4L5 1316 aa14.52□□□□□ -0.08
UBR1-207ENST00000568782 NRAPQ86VF7 1730 aa14.52□□□□□ -0.09
UBR1-207ENST00000568782 USP19O94966 1318 aa14.51□□□□□ -0.09
UBR1-207ENST00000568782 BRWD3Q6RI45 1802 aa14.51□□□□□ -0.09
UBR1-207ENST00000568782 FAM98CQ17RN3 349 aaKnown RBP14.51□□□□□ -0.09
UBR1-207ENST00000568782 CPDO75976 1380 aa14.5□□□□□ -0.09
UBR1-207ENST00000568782 ONECUT3O60422 494 aaPredicted RBP14.5□□□□□ -0.09
UBR1-207ENST00000568782 KRT27Q7Z3Y8 459 aa14.5□□□□□ -0.09
UBR1-207ENST00000568782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.5□□□□□ -0.09
UBR1-207ENST00000568782 USP47Q96K76 1375 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 NINLQ9Y2I6 1382 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 SPATA31A5Q5VU36 1347 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 SPATA31A7Q8IWB4 1347 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 NRKQ7Z2Y5 1582 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 SLC12A5Q9H2X9 1139 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 USP35Q9P2H5 1018 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 MON2Q7Z3U7 1717 aa14.49□□□□□ -0.09
UBR1-207ENST00000568782 CPSF1Q10570 1443 aaKnown RBP14.49□□□□□ -0.09
UBR1-207ENST00000568782 SOX12O15370 315 aa14.48□□□□□ -0.09
UBR1-207ENST00000568782 PIK3C2AO00443 1686 aa14.47□□□□□ -0.09
UBR1-207ENST00000568782 SPATA31A1Q5TZJ5 1347 aa14.46□□□□□ -0.09
UBR1-207ENST00000568782 TESK2Q96S53 571 aa14.46□□□□□ -0.09
UBR1-207ENST00000568782 SSH2Q76I76 1423 aa14.46□□□□□ -0.09
UBR1-207ENST00000568782 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
UBR1-207ENST00000568782 EDC4Q6P2E9 1401 aaKnown RBP14.45□□□□□ -0.1
UBR1-207ENST00000568782 TCP11L2Q8N4U5 519 aa14.45□□□□□ -0.1
UBR1-207ENST00000568782 THRAP3Q9Y2W1 955 aaKnown RBP14.45□□□□□ -0.1
UBR1-207ENST00000568782 AATKQ6ZMQ8 1374 aa14.45□□□□□ -0.1
UBR1-207ENST00000568782 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
UBR1-207ENST00000568782 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
UBR1-207ENST00000568782 SLIT3O75094 1523 aa14.44□□□□□ -0.1
UBR1-207ENST00000568782 CAMTA1Q9Y6Y1 1673 aa14.43□□□□□ -0.1
UBR1-207ENST00000568782 LARP1Q6PKG0 1096 aaKnown RBP14.43□□□□□ -0.1
UBR1-207ENST00000568782 BARGINQ6ZT62 677 aa14.43□□□□□ -0.1
UBR1-207ENST00000568782 BLMP54132 1417 aaPredicted RBP14.42□□□□□ -0.1
UBR1-207ENST00000568782 ARHGEF25Q86VW2 580 aa14.42□□□□□ -0.1
UBR1-207ENST00000568782 NME9Q86XW9 330 aa14.42□□□□□ -0.1
UBR1-207ENST00000568782 COG3Q96JB2 828 aa14.42□□□□□ -0.1
UBR1-207ENST00000568782 A0A1W2PP64 1363 aa14.42□□□□□ -0.1
UBR1-207ENST00000568782 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
UBR1-207ENST00000568782 EIF4G2P78344 907 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBR1-207ENST00000568782 USP31Q70CQ4 1352 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms