RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 GGCXP38435 758 aa11.28□□□□□ -0.6
CYLD-213ENST00000568744 IRF5Q13568 498 aa11.27□□□□□ -0.61
CYLD-213ENST00000568744 FKBPLQ9UIM3 349 aa11.27□□□□□ -0.61
CYLD-213ENST00000568744 VAC14Q08AM6 782 aa11.26□□□□□ -0.61
CYLD-213ENST00000568744 ARMC2Q8NEN0 867 aa11.26□□□□□ -0.61
CYLD-213ENST00000568744 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
CYLD-213ENST00000568744 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
CYLD-213ENST00000568744 ARID3AQ99856 593 aa11.25□□□□□ -0.61
CYLD-213ENST00000568744 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
CYLD-213ENST00000568744 POM121CA8CG34 1229 aa11.24□□□□□ -0.61
CYLD-213ENST00000568744 GPR37L1O60883 481 aa11.24□□□□□ -0.61
CYLD-213ENST00000568744 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
CYLD-213ENST00000568744 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
CYLD-213ENST00000568744 PPP1R18Q6NYC8 613 aa11.22□□□□□ -0.61
CYLD-213ENST00000568744 C1orf115Q9H7X2 142 aa11.22□□□□□ -0.61
CYLD-213ENST00000568744 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
CYLD-213ENST00000568744 LINC01559Q495D7 138 aa11.21□□□□□ -0.61
CYLD-213ENST00000568744 NBPF14Q5TI25 921 aa11.21□□□□□ -0.61
CYLD-213ENST00000568744 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
CYLD-213ENST00000568744 AGERQ15109 404 aa11.2□□□□□ -0.62
CYLD-213ENST00000568744 BAP1Q92560 729 aa11.2□□□□□ -0.62
CYLD-213ENST00000568744 ZBBXA8MT70 800 aa11.19□□□□□ -0.62
CYLD-213ENST00000568744 CALR3Q96L12 384 aaKnown RBP11.19□□□□□ -0.62
CYLD-213ENST00000568744 PTK2Q05397 1052 aa11.18□□□□□ -0.62
CYLD-213ENST00000568744 NR1H3Q13133 447 aa11.18□□□□□ -0.62
CYLD-213ENST00000568744 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
CYLD-213ENST00000568744 FBXO45P0C2W1 286 aa11.17□□□□□ -0.62
CYLD-213ENST00000568744 HDGFL1Q5TGJ6 251 aa11.17□□□□□ -0.62
CYLD-213ENST00000568744 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CYLD-213ENST00000568744 GLMNQ92990 594 aa11.17□□□□□ -0.62
CYLD-213ENST00000568744 CCDC97Q96F63 343 aaPredicted RBP11.17□□□□□ -0.62
CYLD-213ENST00000568744 ARHGAP9Q9BRR9 750 aa11.17□□□□□ -0.62
CYLD-213ENST00000568744 EIF4G2P78344 907 aaKnown RBP eCLIP11.16□□□□□ -0.62
CYLD-213ENST00000568744 PLA2G2CQ5R387 149 aa11.16□□□□□ -0.62
CYLD-213ENST00000568744 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
CYLD-213ENST00000568744 CCDC82Q8N4S0 544 aa11.16□□□□□ -0.62
CYLD-213ENST00000568744 CARD14Q9BXL6 1004 aa11.16□□□□□ -0.62
CYLD-213ENST00000568744 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
CYLD-213ENST00000568744 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
CYLD-213ENST00000568744 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
CYLD-213ENST00000568744 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
CYLD-213ENST00000568744 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
CYLD-213ENST00000568744 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
CYLD-213ENST00000568744 TRIM32Q13049 653 aa11.12□□□□□ -0.63
CYLD-213ENST00000568744 FOXJ1Q92949 421 aa11.12□□□□□ -0.63
CYLD-213ENST00000568744 GPSM3Q9Y4H4 160 aa11.12□□□□□ -0.63
CYLD-213ENST00000568744 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
CYLD-213ENST00000568744 ADAM32Q8TC27 787 aa11.11□□□□□ -0.63
CYLD-213ENST00000568744 ADAMTS19Q8TE59 1207 aa11.11□□□□□ -0.63
CYLD-213ENST00000568744 SOX11P35716 441 aa11.1□□□□□ -0.63
CYLD-213ENST00000568744 SERPINA10Q9UK55 444 aa11.1□□□□□ -0.63
CYLD-213ENST00000568744 SH3BP2P78314 561 aa11.09□□□□□ -0.63
CYLD-213ENST00000568744 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
CYLD-213ENST00000568744 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
CYLD-213ENST00000568744 DZIP3Q86Y13 1208 aaKnown RBP11.08□□□□□ -0.64
CYLD-213ENST00000568744 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
CYLD-213ENST00000568744 ALG2Q9H553 416 aa11.08□□□□□ -0.64
CYLD-213ENST00000568744 RPIAP49247 311 aa11.07□□□□□ -0.64
CYLD-213ENST00000568744 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
CYLD-213ENST00000568744 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
CYLD-213ENST00000568744 SLC19A1P41440 591 aa11.05□□□□□ -0.64
CYLD-213ENST00000568744 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
CYLD-213ENST00000568744 A0A0G2JS52 829 aa11.04□□□□□ -0.64
CYLD-213ENST00000568744 SKOR1P84550 965 aa11.04□□□□□ -0.64
CYLD-213ENST00000568744 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
CYLD-213ENST00000568744 SH3RF1Q7Z6J0 888 aa11.04□□□□□ -0.64
CYLD-213ENST00000568744 EHBP1Q8NDI1 1231 aa11.04□□□□□ -0.64
CYLD-213ENST00000568744 SLC10A4Q96EP9 437 aa11.04□□□□□ -0.64
CYLD-213ENST00000568744 WNT7BP56706 349 aa11.03□□□□□ -0.64
CYLD-213ENST00000568744 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
CYLD-213ENST00000568744 RFX1P22670 979 aa11.01□□□□□ -0.65
CYLD-213ENST00000568744 MCCD1P59942 119 aaPredicted RBP11.01□□□□□ -0.65
CYLD-213ENST00000568744 SLFNL1Q499Z3 407 aa11.01□□□□□ -0.65
CYLD-213ENST00000568744 VARSP26640 1264 aaKnown RBP11□□□□□ -0.65
CYLD-213ENST00000568744 ARID5BQ14865 1188 aa11□□□□□ -0.65
CYLD-213ENST00000568744 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
CYLD-213ENST00000568744 FAM174AQ8TBP5 190 aa11□□□□□ -0.65
CYLD-213ENST00000568744 EMID1Q96A84 441 aaPredicted RBP11□□□□□ -0.65
CYLD-213ENST00000568744 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
CYLD-213ENST00000568744 UCN2Q96RP3 112 aa10.99□□□□□ -0.65
CYLD-213ENST00000568744 PPP1R12CQ9BZL4 782 aa10.99□□□□□ -0.65
CYLD-213ENST00000568744 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
CYLD-213ENST00000568744 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
CYLD-213ENST00000568744 SKIP12755 728 aa10.98□□□□□ -0.65
CYLD-213ENST00000568744 RAB15P59190 212 aa10.98□□□□□ -0.65
CYLD-213ENST00000568744 PRKD2Q9BZL6 878 aa10.98□□□□□ -0.65
CYLD-213ENST00000568744 PALM3A6NDB9 673 aaPredicted RBP10.97□□□□□ -0.65
CYLD-213ENST00000568744 TBC1D9Q6ZT07 1266 aa10.97□□□□□ -0.65
CYLD-213ENST00000568744 RNF135Q8IUD6 432 aa10.97□□□□□ -0.65
CYLD-213ENST00000568744 C1QTNF2Q9BXJ5 285 aa10.97□□□□□ -0.65
CYLD-213ENST00000568744 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.65
CYLD-213ENST00000568744 LMOD1P29536 600 aaPredicted RBP10.96□□□□□ -0.65
CYLD-213ENST00000568744 FOXC1Q12948 553 aa10.96□□□□□ -0.65
CYLD-213ENST00000568744 ZNF697Q5TEC3 545 aa10.96□□□□□ -0.65
CYLD-213ENST00000568744 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
CYLD-213ENST00000568744 NBPF20Q3BBV1 942 aa10.95□□□□□ -0.66
CYLD-213ENST00000568744 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
CYLD-213ENST00000568744 ATP9BO43861 1147 aa10.94□□□□□ -0.66
CYLD-213ENST00000568744 TRMT44Q8IYL2 757 aaKnown RBP10.94□□□□□ -0.66
CYLD-213ENST00000568744 TLL2Q9Y6L7 1015 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms