RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 PER1O15534 1290 aaPredicted RBP11.13□□□□□ -0.63
HERPUD1-214ENST00000568651 HRO43593 1189 aa11.13□□□□□ -0.63
HERPUD1-214ENST00000568651 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
HERPUD1-214ENST00000568651 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
HERPUD1-214ENST00000568651 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
HERPUD1-214ENST00000568651 CFTRP13569 1480 aa11.12□□□□□ -0.63
HERPUD1-214ENST00000568651 ZC3H4Q9UPT8 1303 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-214ENST00000568651 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-214ENST00000568651 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-214ENST00000568651 USB1Q9BQ65 265 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-214ENST00000568651 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
HERPUD1-214ENST00000568651 BRICD5Q6PL45 260 aa11.11□□□□□ -0.63
HERPUD1-214ENST00000568651 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
HERPUD1-214ENST00000568651 SOWAHBA6NEL2 793 aa11.1□□□□□ -0.63
HERPUD1-214ENST00000568651 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
HERPUD1-214ENST00000568651 PALM3A6NDB9 673 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-214ENST00000568651 NR1I2O75469 434 aa11.09□□□□□ -0.63
HERPUD1-214ENST00000568651 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
HERPUD1-214ENST00000568651 PPP4CP60510 307 aa11.08□□□□□ -0.64
HERPUD1-214ENST00000568651 NR1H3Q13133 447 aa11.08□□□□□ -0.64
HERPUD1-214ENST00000568651 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
HERPUD1-214ENST00000568651 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
HERPUD1-214ENST00000568651 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
HERPUD1-214ENST00000568651 PTPRNQ16849 979 aa11.07□□□□□ -0.64
HERPUD1-214ENST00000568651 BLOC1S3Q6QNY0 202 aa11.07□□□□□ -0.64
HERPUD1-214ENST00000568651 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
HERPUD1-214ENST00000568651 THAP11Q96EK4 314 aa11.07□□□□□ -0.64
HERPUD1-214ENST00000568651 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
HERPUD1-214ENST00000568651 F12P00748 615 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-214ENST00000568651 FKBPLQ9UIM3 349 aa11.06□□□□□ -0.64
HERPUD1-214ENST00000568651 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 CSB-PGBD3P0DP91 1061 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 JUNDP17535 347 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 NFATC2IPQ8NCF5 419 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 STAC3Q96MF2 364 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 PCDHB3Q9Y5E6 796 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 IFT140Q96RY7 1462 aa11.05□□□□□ -0.64
HERPUD1-214ENST00000568651 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
HERPUD1-214ENST00000568651 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
HERPUD1-214ENST00000568651 APLP1P51693 650 aa11.04□□□□□ -0.64
HERPUD1-214ENST00000568651 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
HERPUD1-214ENST00000568651 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
HERPUD1-214ENST00000568651 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
HERPUD1-214ENST00000568651 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
HERPUD1-214ENST00000568651 ATG7O95352 703 aa11.03□□□□□ -0.64
HERPUD1-214ENST00000568651 AEBP1Q8IUX7 1158 aa11.03□□□□□ -0.64
HERPUD1-214ENST00000568651 TFIP11Q9UBB9 837 aaKnown RBP11.03□□□□□ -0.64
HERPUD1-214ENST00000568651 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
HERPUD1-214ENST00000568651 BRD1O95696 1058 aa11.02□□□□□ -0.65
HERPUD1-214ENST00000568651 RFX1P22670 979 aa11.02□□□□□ -0.65
HERPUD1-214ENST00000568651 LMOD1P29536 600 aaPredicted RBP11.02□□□□□ -0.65
HERPUD1-214ENST00000568651 GPKOWQ92917 476 aaPredicted RBP eCLIP11.02□□□□□ -0.655e-10■■□□□ 12.7
HERPUD1-214ENST00000568651 GPSM3Q9Y4H4 160 aa11.02□□□□□ -0.65
HERPUD1-214ENST00000568651 ATP9BO43861 1147 aa11.01□□□□□ -0.65
HERPUD1-214ENST00000568651 FBXO45P0C2W1 286 aa11.01□□□□□ -0.65
HERPUD1-214ENST00000568651 KCNA1Q09470 495 aa11.01□□□□□ -0.65
HERPUD1-214ENST00000568651 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.651e-6■■■■□ 26.6
HERPUD1-214ENST00000568651 MCCD1P59942 119 aaPredicted RBP11□□□□□ -0.65
HERPUD1-214ENST00000568651 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
HERPUD1-214ENST00000568651 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
HERPUD1-214ENST00000568651 DXOO77932 396 aaKnown RBP10.99□□□□□ -0.65
HERPUD1-214ENST00000568651 RANGAP1P46060 587 aaPredicted RBP10.99□□□□□ -0.65
HERPUD1-214ENST00000568651 BCAMP50895 628 aa10.99□□□□□ -0.65
HERPUD1-214ENST00000568651 WNT2BQ93097 391 aa10.99□□□□□ -0.65
HERPUD1-214ENST00000568651 CCNYL3P0C7X3 344 aa10.97□□□□□ -0.65
HERPUD1-214ENST00000568651 MMP16P51512 607 aa10.97□□□□□ -0.65
HERPUD1-214ENST00000568651 TBC1D9Q6ZT07 1266 aa10.97□□□□□ -0.65
HERPUD1-214ENST00000568651 TOP2AP11388 1531 aaKnown RBP10.97□□□□□ -0.65
HERPUD1-214ENST00000568651 TOPBP1Q92547 1522 aa10.97□□□□□ -0.65
HERPUD1-214ENST00000568651 ELOAQ14241 798 aaKnown RBP10.96□□□□□ -0.65
HERPUD1-214ENST00000568651 NYAP1Q6ZVC0 841 aa10.96□□□□□ -0.65
HERPUD1-214ENST00000568651 PLEKHM2Q8IWE5 1019 aa10.96□□□□□ -0.65
HERPUD1-214ENST00000568651 FAM163AQ96GL9 167 aaPredicted RBP10.96□□□□□ -0.65
HERPUD1-214ENST00000568651 EVA1BQ9NVM1 165 aa10.96□□□□□ -0.65
HERPUD1-214ENST00000568651 MAP10Q9P2G4 905 aa10.96□□□□□ -0.65
HERPUD1-214ENST00000568651 EIF4G3O43432 1585 aaKnown RBP10.95□□□□□ -0.66
HERPUD1-214ENST00000568651 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
HERPUD1-214ENST00000568651 PTK2Q05397 1052 aa10.94□□□□□ -0.66
HERPUD1-214ENST00000568651 NBPF14Q5TI25 921 aa10.94□□□□□ -0.66
HERPUD1-214ENST00000568651 KCNH2Q12809 1159 aa10.93□□□□□ -0.66
HERPUD1-214ENST00000568651 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
HERPUD1-214ENST00000568651 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
HERPUD1-214ENST00000568651 SPSB2Q99619 263 aa10.93□□□□□ -0.66
HERPUD1-214ENST00000568651 NUDT12Q9BQG2 462 aa10.93□□□□□ -0.66
HERPUD1-214ENST00000568651 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
HERPUD1-214ENST00000568651 CTHP32929 405 aa10.92□□□□□ -0.66
HERPUD1-214ENST00000568651 TMCO4Q5TGY1 634 aa10.92□□□□□ -0.66
HERPUD1-214ENST00000568651 FAM160A2Q8N612 972 aaPredicted RBP10.92□□□□□ -0.66
HERPUD1-214ENST00000568651 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
HERPUD1-214ENST00000568651 LZTS3O60299 673 aaPredicted RBP10.91□□□□□ -0.66
HERPUD1-214ENST00000568651 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
HERPUD1-214ENST00000568651 B4GALNT3Q6L9W6 998 aa10.91□□□□□ -0.66
HERPUD1-214ENST00000568651 WBP1LQ9NX94 342 aa10.91□□□□□ -0.66
HERPUD1-214ENST00000568651 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
HERPUD1-214ENST00000568651 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
HERPUD1-214ENST00000568651 LCE2DQ5TA82 110 aaPredicted RBP10.9□□□□□ -0.66
HERPUD1-214ENST00000568651 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
HERPUD1-214ENST00000568651 USP17L3A6NCW0 530 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms