RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	TNS1	Q9HBL0	1735 aa	Known RBP	12.15	□□□□□ -0.46
TSC2-223	ENST00000568566	ADGRB2	O60241	1585 aa		12.15	□□□□□ -0.46
TSC2-223	ENST00000568566	R3HDM1	Q15032	1099 aa	Known RBP	12.15	□□□□□ -0.46
TSC2-223	ENST00000568566	THSD7A	Q9UPZ6	1657 aa		12.14	□□□□□ -0.47
TSC2-223	ENST00000568566	DCAF11	Q8TEB1	546 aa		12.14	□□□□□ -0.47
TSC2-223	ENST00000568566	L3MBTL2	Q969R5	705 aa		12.14	□□□□□ -0.47
TSC2-223	ENST00000568566	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.14	□□□□□ -0.47
TSC2-223	ENST00000568566	POGK	Q9P215	609 aa		12.14	□□□□□ -0.47
TSC2-223	ENST00000568566	DLC1	Q96QB1	1528 aa		12.14	□□□□□ -0.47
TSC2-223	ENST00000568566	CRYBG1	Q9Y4K1	1723 aa		12.13	□□□□□ -0.47
TSC2-223	ENST00000568566	GPRASP1	Q5JY77	1395 aa		12.13	□□□□□ -0.47
TSC2-223	ENST00000568566	SPATA31A5	Q5VU36	1347 aa		12.12	□□□□□ -0.47
TSC2-223	ENST00000568566	SPATA31A7	Q8IWB4	1347 aa		12.12	□□□□□ -0.47
TSC2-223	ENST00000568566	DISP2	A7MBM2	1401 aa		12.11	□□□□□ -0.47
TSC2-223	ENST00000568566	TULP4	Q9NRJ4	1543 aa		12.11	□□□□□ -0.47
TSC2-223	ENST00000568566	ADGRB1	O14514	1584 aa		12.11	□□□□□ -0.47
TSC2-223	ENST00000568566	CCER1	Q8TC90	406 aa	Predicted RBP	12.11	□□□□□ -0.47
TSC2-223	ENST00000568566	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.11	□□□□□ -0.47
TSC2-223	ENST00000568566	PRR36	Q9H6K5	1346 aa		12.11	□□□□□ -0.47
TSC2-223	ENST00000568566	EZH2	Q15910	746 aa	Known RBP	12.1	□□□□□ -0.47
TSC2-223	ENST00000568566	NBPF8	Q3BBV2	869 aa		12.1	□□□□□ -0.47
TSC2-223	ENST00000568566	PRDM11	Q9NQV5	511 aa		12.1	□□□□□ -0.47
TSC2-223	ENST00000568566	EIF3A	Q14152	1382 aa	Known RBP	12.09	□□□□□ -0.47
TSC2-223	ENST00000568566	PAK3	O75914	559 aa	Predicted RBP	12.09	□□□□□ -0.47
TSC2-223	ENST00000568566	TRAK1	Q9UPV9	953 aa		12.09	□□□□□ -0.47
TSC2-223	ENST00000568566	TRIM37	O94972	964 aa		12.08	□□□□□ -0.48
TSC2-223	ENST00000568566	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.08	□□□□□ -0.48
TSC2-223	ENST00000568566	KIAA0232	Q92628	1395 aa		12.07	□□□□□ -0.48
TSC2-223	ENST00000568566	CHRNA2	Q15822	529 aa		12.07	□□□□□ -0.48
TSC2-223	ENST00000568566	NBPF1	Q3BBV0	1214 aa		12.07	□□□□□ -0.48
TSC2-223	ENST00000568566	NGDN	Q8NEJ9	315 aa	Known RBP	12.07	□□□□□ -0.48
TSC2-223	ENST00000568566	STRN4	Q9NRL3	753 aa		12.07	□□□□□ -0.48
TSC2-223	ENST00000568566	SPATA31A1	Q5TZJ5	1347 aa		12.07	□□□□□ -0.48
TSC2-223	ENST00000568566	CAMKK2	Q96RR4	588 aa		12.06	□□□□□ -0.48
TSC2-223	ENST00000568566	ITSN1	Q15811	1721 aa		12.06	□□□□□ -0.48
TSC2-223	ENST00000568566	WASL	O00401	505 aa	Predicted RBP	12.05	□□□□□ -0.48
TSC2-223	ENST00000568566	FAM196A	Q6ZSG2	479 aa		12.05	□□□□□ -0.48
TSC2-223	ENST00000568566	USP35	Q9P2H5	1018 aa		12.05	□□□□□ -0.48
TSC2-223	ENST00000568566	RREB1	Q92766	1687 aa		12.05	□□□□□ -0.48
TSC2-223	ENST00000568566	NUP188	Q5SRE5	1749 aa		12.05	□□□□□ -0.48
TSC2-223	ENST00000568566	ATP7B	P35670	1465 aa		12.04	□□□□□ -0.48
TSC2-223	ENST00000568566	APBA3	O96018	575 aa		12.04	□□□□□ -0.48
TSC2-223	ENST00000568566	NUTM2G	Q5VZR2	741 aa		12.04	□□□□□ -0.48
TSC2-223	ENST00000568566	PARD3	Q8TEW0	1356 aa		12.04	□□□□□ -0.48
TSC2-223	ENST00000568566	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.03	□□□□□ -0.48
TSC2-223	ENST00000568566	ZC3H6	P61129	1189 aa	Known RBP	12.03	□□□□□ -0.48
TSC2-223	ENST00000568566	SSH2	Q76I76	1423 aa		12.03	□□□□□ -0.48
TSC2-223	ENST00000568566	NRK	Q7Z2Y5	1582 aa		12.02	□□□□□ -0.49
TSC2-223	ENST00000568566	YY1	P25490	414 aa		12.01	□□□□□ -0.49
TSC2-223	ENST00000568566	TOPAZ1	Q8N9V7	1692 aa		12	□□□□□ -0.49
TSC2-223	ENST00000568566	PDE3B	Q13370	1112 aa		12	□□□□□ -0.49
TSC2-223	ENST00000568566	NUDT16	Q96DE0	195 aa	Known RBP	12	□□□□□ -0.49
TSC2-223	ENST00000568566	TONSL	Q96HA7	1378 aa		12	□□□□□ -0.49
TSC2-223	ENST00000568566	CAMTA1	Q9Y6Y1	1673 aa		12	□□□□□ -0.49
TSC2-223	ENST00000568566	EVA1C	P58658	441 aa		11.99	□□□□□ -0.49
TSC2-223	ENST00000568566	LARP1	Q6PKG0	1096 aa	Known RBP	11.99	□□□□□ -0.49
TSC2-223	ENST00000568566	BARGIN	Q6ZT62	677 aa		11.99	□□□□□ -0.49
TSC2-223	ENST00000568566	LMO7	Q8WWI1	1683 aa		11.99	□□□□□ -0.49
TSC2-223	ENST00000568566	NBPF14	Q5TI25	921 aa		11.98	□□□□□ -0.49
TSC2-223	ENST00000568566	TCP11L2	Q8N4U5	519 aa		11.98	□□□□□ -0.49
TSC2-223	ENST00000568566	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.98	□□□□□ -0.49
TSC2-223	ENST00000568566	POLR3A	O14802	1390 aa	Predicted RBP	11.97	□□□□□ -0.49
TSC2-223	ENST00000568566	ACE	P12821	1306 aa		11.96	□□□□□ -0.49
TSC2-223	ENST00000568566	CDK19	Q9BWU1	502 aa		11.96	□□□□□ -0.49
TSC2-223	ENST00000568566	SPON1	Q9HCB6	807 aa		11.96	□□□□□ -0.49
TSC2-223	ENST00000568566	PARP4	Q9UKK3	1724 aa	Known RBP	11.96	□□□□□ -0.49
TSC2-223	ENST00000568566	CPD	O75976	1380 aa		11.95	□□□□□ -0.5
TSC2-223	ENST00000568566	USP19	O94966	1318 aa		11.95	□□□□□ -0.5
TSC2-223	ENST00000568566	CLSPN	Q9HAW4	1339 aa		11.95	□□□□□ -0.5
TSC2-223	ENST00000568566	ABTB2	Q8N961	1025 aa		11.95	□□□□□ -0.5
TSC2-223	ENST00000568566	COL5A2	P05997	1499 aa	Predicted RBP	11.95	□□□□□ -0.5
TSC2-223	ENST00000568566	NINL	Q9Y2I6	1382 aa		11.94	□□□□□ -0.5
TSC2-223	ENST00000568566	LRRC37A3	O60309	1634 aa		11.94	□□□□□ -0.5
TSC2-223	ENST00000568566	KCNQ2	O43526	872 aa		11.94	□□□□□ -0.5
TSC2-223	ENST00000568566	PEAK1	Q9H792	1746 aa		11.94	□□□□□ -0.5
TSC2-223	ENST00000568566	ZBTB7C	A1YPR0	619 aa		11.93	□□□□□ -0.5
TSC2-223	ENST00000568566	CCDC61	Q9Y6R9	512 aa		11.93	□□□□□ -0.5
TSC2-223	ENST00000568566	OVOS2	A0A0G2JMS6	1433 aa		11.93	□□□□□ -0.5
TSC2-223	ENST00000568566	OVOS2	A0A0J9YW53	1432 aa		11.93	□□□□□ -0.5
TSC2-223	ENST00000568566	OVOS2	Q6IE36	1432 aa		11.93	□□□□□ -0.5
TSC2-223	ENST00000568566	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.92	□□□□□ -0.5
TSC2-223	ENST00000568566	RGPD4	Q7Z3J3	1758 aa		11.92	□□□□□ -0.5
TSC2-223	ENST00000568566	STAC3	Q96MF2	364 aa		11.92	□□□□□ -0.5
TSC2-223	ENST00000568566	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.92	□□□□□ -0.5
TSC2-223	ENST00000568566	THRAP3	Q9Y2W1	955 aa	Known RBP	11.92	□□□□□ -0.5
TSC2-223	ENST00000568566	CRB1	P82279	1406 aa		11.92	□□□□□ -0.5
TSC2-223	ENST00000568566	CASZ1	Q86V15	1759 aa		11.92	□□□□□ -0.5
TSC2-223	ENST00000568566	SBF2	Q86WG5	1849 aa		11.91	□□□□□ -0.5
TSC2-223	ENST00000568566	TRPM1	Q7Z4N2	1603 aa		11.91	□□□□□ -0.5
TSC2-223	ENST00000568566	PLEKHG3	A1L390	1219 aa		11.91	□□□□□ -0.5
TSC2-223	ENST00000568566	DCAF8L1	A6NGE4	600 aa		11.91	□□□□□ -0.5
TSC2-223	ENST00000568566	GC	P02774	474 aa		11.91	□□□□□ -0.5
TSC2-223	ENST00000568566	PPIP5K1	Q6PFW1	1433 aa		11.91	□□□□□ -0.5
TSC2-223	ENST00000568566	UTRN	P46939	3433 aa		11.9	□□□□□ -0.5
TSC2-223	ENST00000568566	PTF1A	Q7RTS3	328 aa		11.9	□□□□□ -0.5
TSC2-223	ENST00000568566	NLRP13	Q86W25	1043 aa		11.9	□□□□□ -0.5
TSC2-223	ENST00000568566	WNK3	Q9BYP7	1800 aa		11.9	□□□□□ -0.5
TSC2-223	ENST00000568566	MYOM1	P52179	1685 aa		11.9	□□□□□ -0.5
TSC2-223	ENST00000568566	SRPK2	P78362	688 aa	Known RBP	11.89	□□□□□ -0.51
TSC2-223	ENST00000568566	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.89	□□□□□ -0.51

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