RNA–Protein interactions for RNA: ENST00000568331.5

SNAP23-216, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-216ENST00000568331 USP21Q9UK80 565 aa29.83■■■□□ 2.37
SNAP23-216ENST00000568331 FNBP4Q8N3X1 1017 aaPredicted RBP29.81■■■□□ 2.36
SNAP23-216ENST00000568331 SBNO2Q9Y2G9 1366 aa29.79■■■□□ 2.36
SNAP23-216ENST00000568331 CABP1Q9NZU7 370 aa29.78■■■□□ 2.36
SNAP23-216ENST00000568331 TRPC5Q9UL62 973 aaPredicted RBP29.76■■■□□ 2.35
SNAP23-216ENST00000568331 RBM6P78332 1123 aaKnown RBP29.75■■■□□ 2.35
SNAP23-216ENST00000568331 ATAD2Q6PL18 1390 aa29.74■■■□□ 2.35
SNAP23-216ENST00000568331 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.71■■■□□ 2.35
SNAP23-216ENST00000568331 CRYBG1Q9Y4K1 1723 aa29.71■■■□□ 2.35
SNAP23-216ENST00000568331 BRD4O60885 1362 aaPredicted RBP29.71■■■□□ 2.35
SNAP23-216ENST00000568331 PLCH1Q4KWH8 1693 aa29.7■■■□□ 2.35
SNAP23-216ENST00000568331 BCL9LQ86UU0 1499 aa29.7■■■□□ 2.35
SNAP23-216ENST00000568331 CDK12Q9NYV4 1490 aaPredicted RBP29.7■■■□□ 2.35
SNAP23-216ENST00000568331 ABTB2Q8N961 1025 aa29.7■■■□□ 2.35
SNAP23-216ENST00000568331 NUTM2GQ5VZR2 741 aa29.69■■■□□ 2.34
SNAP23-216ENST00000568331 SLIT2O94813 1529 aa29.69■■■□□ 2.34
SNAP23-216ENST00000568331 ATRNO75882 1429 aa29.69■■■□□ 2.34
SNAP23-216ENST00000568331 NWD2Q9ULI1 1742 aa29.68■■■□□ 2.34
SNAP23-216ENST00000568331 ST20-MTHFSA0A0A6YYL1 179 aa29.68■■■□□ 2.34
SNAP23-216ENST00000568331 SLC24A1O60721 1099 aa29.68■■■□□ 2.34
SNAP23-216ENST00000568331 UNC5CLQ8IV45 518 aa29.68■■■□□ 2.34
SNAP23-216ENST00000568331 PHRF1Q9P1Y6 1649 aaKnown RBP29.67■■■□□ 2.34
SNAP23-216ENST00000568331 AKAP12Q02952 1782 aa29.67■■■□□ 2.34
SNAP23-216ENST00000568331 ZNF692Q9BU19 519 aaPredicted RBP29.67■■■□□ 2.34
SNAP23-216ENST00000568331 USP6P35125 1406 aa29.67■■■□□ 2.34
SNAP23-216ENST00000568331 COL14A1Q05707 1796 aaKnown RBP29.65■■■□□ 2.34
SNAP23-216ENST00000568331 USP47Q96K76 1375 aa29.64■■■□□ 2.34
SNAP23-216ENST00000568331 FAM83GA6ND36 823 aa29.64■■■□□ 2.34
SNAP23-216ENST00000568331 NLRP13Q86W25 1043 aa29.62■■■□□ 2.33
SNAP23-216ENST00000568331 TMC1Q8TDI8 760 aa29.62■■■□□ 2.33
SNAP23-216ENST00000568331 GJD4Q96KN9 370 aaPredicted RBP29.6■■■□□ 2.33
SNAP23-216ENST00000568331 PUS7Q96PZ0 661 aaKnown RBP29.6■■■□□ 2.33
SNAP23-216ENST00000568331 TESK2Q96S53 571 aa29.6■■■□□ 2.33
SNAP23-216ENST00000568331 PRDM11Q9NQV5 511 aa29.6■■■□□ 2.33
SNAP23-216ENST00000568331 RGS12O14924 1447 aa29.6■■■□□ 2.33
SNAP23-216ENST00000568331 KTN1Q86UP2 1357 aaKnown RBP29.59■■■□□ 2.33
SNAP23-216ENST00000568331 NLRP6P59044 892 aa29.57■■■□□ 2.32
SNAP23-216ENST00000568331 BTG4Q9NY30 223 aa29.57■■■□□ 2.32
SNAP23-216ENST00000568331 CCDC9Q9Y3X0 531 aaKnown RBP29.57■■■□□ 2.32
SNAP23-216ENST00000568331 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
SNAP23-216ENST00000568331 CPSF1Q10570 1443 aaKnown RBP29.56■■■□□ 2.32
SNAP23-216ENST00000568331 KIAA0232Q92628 1395 aa29.56■■■□□ 2.32
SNAP23-216ENST00000568331 ZC3H6P61129 1189 aaKnown RBP29.56■■■□□ 2.32
SNAP23-216ENST00000568331 SSH2Q76I76 1423 aa29.55■■■□□ 2.32
SNAP23-216ENST00000568331 USP19O94966 1318 aa29.55■■■□□ 2.32
SNAP23-216ENST00000568331 TTC21BQ7Z4L5 1316 aa29.55■■■□□ 2.32
SNAP23-216ENST00000568331 NRAPQ86VF7 1730 aa29.55■■■□□ 2.32
SNAP23-216ENST00000568331 VPS72Q15906 364 aa29.55■■■□□ 2.32
SNAP23-216ENST00000568331 HDGFL2Q7Z4V5 671 aaPredicted RBP29.55■■■□□ 2.32
SNAP23-216ENST00000568331 PIK3C2AO00443 1686 aa29.55■■■□□ 2.32
SNAP23-216ENST00000568331 NRKQ7Z2Y5 1582 aa29.55■■■□□ 2.32
SNAP23-216ENST00000568331 TMF1P82094 1093 aa29.54■■■□□ 2.32
SNAP23-216ENST00000568331 TTC21AQ8NDW8 1320 aa29.53■■■□□ 2.32
SNAP23-216ENST00000568331 SLC12A5Q9H2X9 1139 aa29.53■■■□□ 2.32
SNAP23-216ENST00000568331 TERF2IPQ9NYB0 399 aa29.52■■■□□ 2.32
SNAP23-216ENST00000568331 GLI3P10071 1580 aa29.52■■■□□ 2.32
SNAP23-216ENST00000568331 GCP02774 474 aa29.51■■■□□ 2.31
SNAP23-216ENST00000568331 CHRNA2Q15822 529 aa29.51■■■□□ 2.31
SNAP23-216ENST00000568331 NINLQ9Y2I6 1382 aa29.5■■■□□ 2.31
SNAP23-216ENST00000568331 CD163L1Q9NR16 1453 aa29.48■■■□□ 2.31
SNAP23-216ENST00000568331 CDCA8Q53HL2 280 aa29.47■■■□□ 2.31
SNAP23-216ENST00000568331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.47■■■□□ 2.31
SNAP23-216ENST00000568331 CPDO75976 1380 aa29.47■■■□□ 2.31
SNAP23-216ENST00000568331 SLIT3O75094 1523 aa29.46■■■□□ 2.31
SNAP23-216ENST00000568331 ZBTB7CA1YPR0 619 aa29.44■■■□□ 2.3
SNAP23-216ENST00000568331 A0A1W2PP64 1363 aa29.43■■■□□ 2.3
SNAP23-216ENST00000568331 EVA1CP58658 441 aa29.43■■■□□ 2.3
SNAP23-216ENST00000568331 STRN4Q9NRL3 753 aa29.43■■■□□ 2.3
SNAP23-216ENST00000568331 EDC4Q6P2E9 1401 aaKnown RBP29.43■■■□□ 2.3
SNAP23-216ENST00000568331 KCNH5Q8NCM2 988 aa29.42■■■□□ 2.3
SNAP23-216ENST00000568331 UPF1Q92900 1129 aaKnown RBP eCLIP29.41■■■□□ 2.3
SNAP23-216ENST00000568331 LMO7Q8WWI1 1683 aa29.4■■■□□ 2.3
SNAP23-216ENST00000568331 A0A0G2JS52 829 aa29.39■■■□□ 2.3
SNAP23-216ENST00000568331 MYT1Q01538 1121 aa29.39■■■□□ 2.3
SNAP23-216ENST00000568331 SEPT12Q8IYM1 358 aa29.39■■■□□ 2.3
SNAP23-216ENST00000568331 SPATA31A5Q5VU36 1347 aa29.39■■■□□ 2.3
SNAP23-216ENST00000568331 SPATA31A7Q8IWB4 1347 aa29.39■■■□□ 2.3
SNAP23-216ENST00000568331 BRWD3Q6RI45 1802 aa29.38■■■□□ 2.29
SNAP23-216ENST00000568331 SOX12O15370 315 aa29.38■■■□□ 2.29
SNAP23-216ENST00000568331 EIF4G2P78344 907 aaKnown RBP eCLIP29.38■■■□□ 2.29
SNAP23-216ENST00000568331 CAMTA1Q9Y6Y1 1673 aa29.37■■■□□ 2.29
SNAP23-216ENST00000568331 NME9Q86XW9 330 aa29.37■■■□□ 2.29
SNAP23-216ENST00000568331 USP54Q70EL1 1684 aa29.37■■■□□ 2.29
SNAP23-216ENST00000568331 ONECUT3O60422 494 aaPredicted RBP29.36■■■□□ 2.29
SNAP23-216ENST00000568331 FAM98CQ17RN3 349 aaKnown RBP29.36■■■□□ 2.29
SNAP23-216ENST00000568331 USP31Q70CQ4 1352 aa29.36■■■□□ 2.29
SNAP23-216ENST00000568331 ANKRD36BQ8N2N9 1353 aa29.35■■■□□ 2.29
SNAP23-216ENST00000568331 ZRANB1Q9UGI0 708 aa29.34■■■□□ 2.29
SNAP23-216ENST00000568331 AATKQ6ZMQ8 1374 aa29.34■■■□□ 2.29
SNAP23-216ENST00000568331 SPATA31A1Q5TZJ5 1347 aa29.32■■■□□ 2.28
SNAP23-216ENST00000568331 HSPA5P11021 654 aaKnown RBP29.31■■■□□ 2.28
SNAP23-216ENST00000568331 NFAT5O94916 1531 aa29.3■■■□□ 2.28
SNAP23-216ENST00000568331 ARHGEF25Q86VW2 580 aa29.3■■■□□ 2.28
SNAP23-216ENST00000568331 USP35Q9P2H5 1018 aa29.3■■■□□ 2.28
SNAP23-216ENST00000568331 COL18A1P39060 1754 aa29.3■■■□□ 2.28
SNAP23-216ENST00000568331 COL5A2P05997 1499 aaPredicted RBP29.29■■■□□ 2.28
SNAP23-216ENST00000568331 LARP1Q6PKG0 1096 aaKnown RBP29.29■■■□□ 2.28
SNAP23-216ENST00000568331 RGPD5Q99666 1765 aa29.28■■■□□ 2.28
SNAP23-216ENST00000568331 MYOM1P52179 1685 aa29.28■■■□□ 2.28
SNAP23-216ENST00000568331 KRT27Q7Z3Y8 459 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms